KEGG   Mugil cephalus (flathead mullet): 125019848
Entry
125019848         CDS       T08342                                 
Name
(RefSeq) probable histone deacetylase 1-B
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
mcep  Mugil cephalus (flathead mullet)
Pathway
mcep03082  ATP-dependent chromatin remodeling
mcep03083  Polycomb repressive complex
mcep04110  Cell cycle
mcep04330  Notch signaling pathway
mcep04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:mcep00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125019848
   03083 Polycomb repressive complex
    125019848
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    125019848
   04350 TGF-beta signaling pathway
    125019848
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    125019848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcep03036]
    125019848
Enzymes [BR:mcep01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     125019848
Chromosome and associated proteins [BR:mcep03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     125019848
   HDAC complexes
    Sin3A-HDAC complex
     125019848
    BRAF-HDAC complex
     125019848
    REST complex
     125019848
    SHIP complex
     125019848
    MiDAC complex
     125019848
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     125019848
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    125019848
  Chromatin remodeling factors
   NuRD complex
    125019848
SSDB
Motif
Pfam: Hist_deacetyl Glypican RNA_polI_A34
Other DBs
NCBI-GeneID: 125019848
NCBI-ProteinID: XP_047460795
LinkDB
Position
14:2646366..2652280
AA seq 482 aa
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
GEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLGG
GGYTIRNVARCWTYETAVALDCSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAPHPDSGDEDEEDPDKRVSIRAHDKRIACEEEF
SDSEDEAEGQGGGRRNAANHKKAKRVKKEEEKEGEEKKEVKEEEKEEEKMDTSGPKEEVK
TT
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgctgtctcaaggaacaaagaaaaaagtttgctattactatgacggtgatgtggga
aactactattacggccaggggcatcccatgaaacctcacaggattcgcatgacgcacaac
ctcctcctcaactatggcctgtacaggaaaatggagatctatagaccacacaaagccagt
ggggaagagatgacgaaataccacagtgatgactacattaagttcctgaggtccatccga
ccggacaacatgtctgaatacagcaaacaaatgcagagattcaatgtcggagaggactgt
cccgtgtttgatggtctgtttgagttctgccagctctcaacaggtggctctgtggctgga
gcagtgaagctgaacaagcagcagacagacatcgccatcaactgggctggtggactccat
cacgccaagaaatccgaggcctccggtttctgctacgtcaacgacatcgtcctggccatc
ctggagctgctcaagtaccaccagagggtgttatacatagacattgacatccaccatggt
gatggagtagaggaggccttctacaccacagaccgggtcatgaccgtttccttccacaag
tatggggagtacttccctggcaccggagacctgagggacattggagcaggaaagggcaag
tactatgcagtcaactaccccctaagagacggtattgatgatgagtcctacgaagccatc
ttcaagccaatcatggctaaagtcatggagatgtaccagcccagtgctgtggtcctccag
tgcggagcggactctctttctggagacagactgggctgcttcaacctcaccatcaaaggt
catgccaagtgtgtcgagtacatcaaaagtttcaacctccctctcctgatgctgggtggt
ggaggctacaccatccgcaatgtggcccgttgctggacctatgaaaccgccgtcgctttg
gactgttccatccctaacgagttgccctacaatgattactttgagtactttgggcctgat
ttcaagctgcacatcagcccctccaacatgacaaaccagaacaccaatgagtacctggaa
aagatcaaacagcgtctgtttgaaaacctccgtatgctgcctcacgcccccggggtccag
atgcaagccatcccagaggatgctcctcatccggacagtggagacgaagatgaggaagac
ccagacaaacgcgtctcaatccgggctcatgacaagaggatagcctgtgaagaagagttt
tctgactctgaggatgaggcagaggggcagggaggaggccgcaggaatgcagccaaccac
aagaaggccaaacgagtgaagaaggaggaggagaaggaaggagaggaaaagaaagaagtg
aaagaggaggagaaggaggaagagaagatggatacatcaggaccaaaagaagaagtgaag
acaacctga

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