Mugil cephalus (flathead mullet): 125020025
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Entry
125020025 CDS
T08342
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125020025 (trim71)
04121 Ubiquitin system [BR:
mcep04121
]
125020025 (trim71)
Enzymes [BR:
mcep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125020025 (trim71)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125020025 (trim71)
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125020025 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
TEN_NHL
zf-C3HC4
zf-RING_5
zf-RING_2
zf_RING_Vps8_fungal
Ig_GEX2_N
Fungus-induced
Motif
Other DBs
NCBI-GeneID:
125020025
NCBI-ProteinID:
XP_047461180
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Position
14:complement(1622372..1651447)
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AA seq
832 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSTQTTKRLHVLPCLHAFCR
QCLEGHRSPGDPLKLRCPTCDQKVSISEAGVDSLPSSTFLFSNLLDVVVSSEEQIQNKNG
HHHHHRGGLGGGSSGFRHPHGGLLHTHHLGEPQCSSCDEENPATSHCLDCQEYLCDNCVR
AHQRVRLTKDHFIERLGENLHLSRVNANSNSGQSGVSVSLAQSLQNNFALLSLFQDRMNF
CQHHDNEVFLFFCETCSVPICRECSVGRHMGHTFVYLQDAVQDCRAITIQLLADAQQGRQ
AVQLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVKAKSL
YLQVEKLHQSLTKLDSTIAAVSQVLDEGHHLDVLLARERMLTQIHELKALRGLLQPQEDD
RFMFTPPDQALYIAIQSMGLISSGAFAPVTKAHGEGLKGALRGKPASFTVIGYDHDGEPR
LSGGDSMSAVVMSVTDGNLSAAEITDHQNGSYTVGYLPKCEGEHLVSVLVCNQHIQGSPF
KVMVKSGRSYGCLGSQVSSFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIFKPC
GAFHHKFGSLGSRPGQFDRPAGVACDSQRRIVVADKDNHRVQVFTFEGQFLLKFGEKGTK
NGQFNYPWDVAVNSEGKILVSDTRNHRVQLFGPDGSFLNKYGFEGALWKHFDSPRGVAFN
HEDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRNH
RVQVFEPNGNFLCKFGTQGSGFGQMDRPSGVAVTPDGVIVIVDFGNNRILKF
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctttccagactcagacctgcagacatgcccgctctgcaaggagttgtgcggc
tcctctgcacccatctcctccagctcttctacctcatcatcttcgtcgcatacctcatcc
tcctccacccaaacaaccaagaggctccacgtcctgccttgcctgcatgccttttgcagg
cagtgcctggagggacatcgcagtcctggggatcctctgaagctgcggtgccccacctgt
gaccagaaggtgtccatctctgaggctggggtggactccctgccttcctccaccttcctc
ttcagcaacctgctggatgtggtagtgagctcagaggagcagatccagaacaaaaatggg
caccatcaccaccaccggggaggattgggaggaggctcctctggcttccgtcatccccat
ggagggctgttacacacacatcacctgggagagccccagtgcagctcctgtgatgaggag
aacccagccacatcccactgccttgactgccaggagtacctctgtgacaactgtgtgcgg
gcacaccagcgggtgcggctgaccaaagaccacttcatcgaacgcctgggagagaacctc
cacctcagtcgggtcaatgccaacagcaactctggacagtcaggggtgtctgtgtccctc
gcccagtccctgcagaacaactttgccttgctgtccctgtttcaggatcgcatgaacttc
tgccagcaccatgacaacgaggtgtttctgttcttctgtgaaacctgctctgtgcctatc
tgcagggagtgtagcgtgggccgtcacatgggccacacctttgtttacctgcaagacgcc
gtgcaggattgcagggccatcaccattcagctgctagcagatgcgcagcagggacgacag
gctgtgcagctaagcatggagaaagtccaggccatggcagagcaggtggagatcaaagct
aaggtggtgcagactgaagtgaaggcccttgtcctaagacacaagaaagctctggaggag
agggagtgtgaacttttgtggaaggtggagaagatccgtcaggtgaaagccaagtctctg
tatcttcaggtggagaaactacaccagagtctgaccaagttggacagcaccatcgctgca
gtcagccaggtgctggatgagggacaccaccttgacgtgctgctggccagggagcgaatg
ctcacccagatacatgaactcaaggctctaaggggcctgctgcagccacaagaggatgac
cgcttcatgttcactcctccagaccaggctttatacatagccatccagtccatgggtctg
attagcagtggagcctttgctcctgtcaccaaagcccatggtgagggtctgaaaggtgct
ctccgaggcaagcctgcctcctttactgtaattggatacgatcatgatggcgagccccgt
ctttctggtggggacagcatgtctgcagtagtcatgtcagtcacagatggaaacctgtct
gcagcggagataacagatcaccagaatggctcgtacactgtcggctacctgcccaaatgt
gagggggagcatcttgtgtctgtgctggtgtgtaaccagcacatccagggcagtcccttc
aaggtgatggtgaagtcaggacggagctacgggtgccttggctcccaagtgtcatccttt
ggatgtgagggggagggagatggtcagttgtgtcgtccctggggtatcagcgttgacaag
gagggatacgtggtggtggctgatcgcagcaacaaccgcatacagatattcaagccttgt
ggggccttccaccataagtttggctctttgggttctcggcctggtcagtttgatcgtcca
gctggggttgcatgtgacagtcagagacgaatcgttgttgctgataaggacaatcaccgt
gtacaggtgtttacttttgagggccagttcctgctgaagtttggggaaaagggtaccaag
aatgggcagttcaactatccttgggatgttgcagtcaactctgagggtaagatcttggtc
tcagataccaggaaccaccgtgtgcagctctttggtccagatggctctttcctcaacaag
tatggctttgaaggggccctgtggaaacactttgactctcccagaggagtagcctttaat
catgaagaccacctggtggtgaccgatttcaacaaccaccggctcctggttatccggcca
gactgccagtccgctcgctttctgggttccgagggtactgggaatgggcagtttctgaga
cctcaaggcgtcgctgtggaccaagagaaccgcatcatcgtagctgactcccgtaaccat
agagttcaagtatttgagcccaatggaaacttcttatgcaaatttggcacacagggaagt
gggtttgggcagatggatcggccctctggtgtggctgtgacacctgatggagtcattgtg
attgttgactttggaaataatcgcatcctcaagttctaa
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