Mugil cephalus (flathead mullet): 125020056
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Entry
125020056 CDS
T08342
Symbol
col1a2
Name
(RefSeq) collagen alpha-2(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04510
Focal adhesion
mcep04512
ECM-receptor interaction
mcep04518
Integrin signaling
mcep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125020056 (col1a2)
04518 Integrin signaling
125020056 (col1a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125020056 (col1a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125020056 (col1a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mcep00536
]
125020056 (col1a2)
Glycosaminoglycan binding proteins [BR:
mcep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125020056 (col1a2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
125020056
NCBI-ProteinID:
XP_047461247
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All DBs
Position
14:complement(10093719..10110326)
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AA seq
1356 aa
AA seq
DB search
MLSFVDTRILLLLAVTSYLASCQYSGRVKGPRGDKGPRGDRGPKGPNGKDGKPGLPGPPG
PPGPPGLGGNFAAQYDGAKAPDPGPGPMGLMGPRGPPGPPGPPGPQGHTGHAGEPGEPGQ
TGPVGARGPPGPPGKSGEDGNNGRPGKPGDRGAPGPQGARGFPGTPGLPGMKGHRGYTGL
DGRKGEPGAAGAKGEPGAHGAAGSPGLAGARGLPGERGRAGPAGPAGARGADGNVGPAGP
AGPLGAAGPPGFPGGPGPKGEIGPAGSTGPSGPQGARGEPGPNGAAGPVGPPGNPGANGL
AGSKGAAGTPGVAGAPGFPGPRGGPGPQGPQGAAGPRGLSGDPGPQGVKGDGGPKGEPGN
AGPQGAPGSQGEEGKRGPSGELGATGPSGARGARGAPGSRGMPGAEGRTGPIGMPGARGS
TGSAGPRGPPGDAGRAGEPGPAGLRGLPGSPGSSGPPGKEGPAGPAGQDGRTGPPGPTGP
RGQPGNIGFPGPKGPAGEPGKPGEKGNTGPTGLRGAPGPDGNNGATGATGPAGGPGEKGE
QGPAGAPGFQGLPGPAGAAGEAGKPGDRGIPGDQGVAGPAGGKGERGNPGAAGAAGAQGP
IGPRGPAGTPGPDGGKGEPGSAGPAGGPGHQGPGGMPGERGAAGGPGGKGEKGEPGHRGP
DGNAGRDGARGLPGPAGPPGPTGANGDKGESGSFGPAGPAGARGAPGERGEVGPAGAPGF
AGPPGADGQPGARGERGPSGGKGEAGPSGPAGPAGQSGPPGASGPAGPAGARGDTGPAGL
TGFPGAAGRVGAAGPAGIVGPPGPSGPAGKDGPRGLRGDPGPAGPSGEQGMVGPPGAPGE
KGPSGESGPPGTPGAPGTSGPLGLQGFVGLPGARGDRGTPGGAGGVGEPGRVGPAGPPGA
RGPPGNIGLPGMTGPQGEAGREGNPGNDGPPGRPGIAGFKGDRGEPGPAGSMGLAGAPGP
AGPTGAAGRPGNRGEAGPSGATGAVGPAGARGSAGPAGSRGEKGVAGDKGERGMKGLRGH
PGLQGMPGPSGPSGDTGPAGANGPAGPRGPAGPHGPPGKDGRAGSHGTIGSPGARGPPGY
SGPVGPPGAPGLPGPPGPAGGGYDVSGYDEYRADQPALRAKDYEVDATIKSLNTQIENLL
TPEGSRKNPARTCRDIKLSHPDWSSGFYWIDPNQGCINDAIKVFCDFTTRETCIYAHPES
IARKNWFRSTEGKKHVWFGETINGGTEFTYNDETLSPQSMATQLAFMRLLSNQASQNITY
HCKNSVAYMDGASGSLKKAVVLQGSNDVELRAEGNSRFTFSVLEDGCTTHTGEWSKTVIE
YRTNKPSRLPILDIAPLDIGGAEQEFGLDIGPVCFK
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacccggattctgttgctgcttgcagtaacttcatacctagca
tcatgtcaatactcgggaagagtcaagggtcccagaggagacaaaggacctcgaggtgac
aggggtcctaagggcccaaatggaaaagatggcaaacccggactccctggaccccctggc
ccccctggtccccctggacttggaggaaactttgctgctcagtatgatggtgccaaagct
cctgatcccggccctggacccatgggtttgatgggtcccagaggacctcccggacctcct
ggcccccctggacctcagggacacaccggacacgctggtgagcccggagagcctggacag
actggtcccgttggagcccgtggtccccctggacctcctggcaaatctggagaggacggt
aacaatggcagacctggcaagcccggagacagaggcgcacctggtcctcagggagctcgt
ggattccccggaacccctggacttccaggaatgaagggacacagaggttacactggtctg
gatggacgcaagggagagcctggtgccgctggtgccaagggtgagcccggtgcacatgga
gctgctggaagtcctggactggctggagctcgtggtttgcctggtgagagaggtcgtgct
ggccctgctggccccgctggtgctcgtggtgctgatggcaatgttggacccgctggacct
gctggtcccctcggcgctgctggtcccccaggtttccccggtggtcccggccccaaggga
gagattggacccgccggatctactggcccaagtggacctcagggagctagaggagagcct
ggtcccaatggtgctgctggccccgttggtccccctggtaaccctggtgctaatggtttg
gctggctccaagggagccgctggtacccctggtgttgctggagctcctggcttccctgga
ccaagaggaggacccggaccccaaggacctcagggtgctgccggacccagaggcctgtct
ggagaccctggacctcagggagttaagggagatggcggtcccaaaggagagcctggtaat
gctggaccccaaggagcccctggatctcagggagaggagggaaagagaggaccttctggt
gagcttggtgctactggcccctctggtgcccgtggagctagaggcgcccctggcagccgt
ggcatgcctggtgctgagggaagaactggccccattggtatgcctggtgctcgtggatct
actggcagcgctggacctcgtggaccccctggagatgctggtcgtgctggtgagcccggc
ccagctggtctcaggggtctcccaggaagccctggcagctctggacccccaggaaaggag
ggaccagctggtcctgctggacaagatggccgcaccggacctcctggcccaactggacct
agaggccagcccggaaacatcggtttccctggacccaaaggacctgctggtgagcctggc
aagcccggagagaagggaaacactggcccaactggactgagaggagcccccggccctgat
ggtaacaatggagccactggcgctactggacctgctggcggtcctggtgagaagggagag
cagggacctgctggagctcctggcttccagggtctgcccggacctgctggagcagctgga
gaggctggcaagcctggagacagaggtatcccaggagaccagggagttgctggacctgct
ggtggcaagggagagcgtggtaatcctggtgctgctggagccgctggagctcagggacca
attggaccccgtggacccgctggaacccccggacccgatggtggcaagggagagcccggt
tctgccggacctgctggtggccctggacatcagggacctggtggcatgcctggtgagcgc
ggagctgctggtggccccggaggcaagggagagaagggagagcctggacacagaggcccc
gacggcaatgctggtagagatggtgcccgtggtctgcctggacccgctggacctcctgga
cccaccggagccaatggtgataagggtgagagtggttcctttggacctgctggccccgct
ggagctcgtggagcccctggcgagcgtggagaggttggacctgctggagctcccggattc
gctggaccccctggcgctgacggtcagcccggagcaagaggagagcgcggaccttctgga
ggaaagggagaggccggcccctctggccctgccggacccgctggacagtctggaccccct
ggtgcttctggacctgctggacctgctggtgctcgtggagacactggacctgctggtctg
accggtttccctggtgctgctggcagagttggtgccgctggccccgctggtattgttgga
ccccctggcccctctggcccagccggtaaggatggacctcgtggtctccgtggtgatcct
ggtcccgctggtccttctggagagcagggaatggttggaccacctggtgctcctggagag
aagggaccctctggagagtctggcccccctggtactcctggtgctcctggtacttctggt
cctcttggacttcagggattcgtcggtctgcctggtgctagaggagatcgtggtacccct
ggtggtgctggtggtgtgggagagcctggtagagttggacccgctggtccccctggagcc
cgtggcccccctggcaacattggcctgcctggtatgaccggaccccaaggagaggctgga
cgtgagggtaaccctggtaacgatggacctccaggccgccctggtattgctggattcaag
ggagaccgtggtgagcctggacctgctggttccatgggacttgctggtgcccctggacct
gctggacccactggagccgctggcagacctggaaaccgtggagaggctggcccgtcaggt
gcaactggcgctgttggccccgctggagcaagaggctccgctggacccgctggatctcgt
ggtgagaagggagttgctggagacaagggagagagaggcatgaagggtctgcgtggacac
cctggtcttcagggaatgcctggaccttccggaccctccggtgacactggacctgctgga
gccaacggacccgctggacccagaggacctgctggaccccacggaccccctggaaaggat
ggcagagctggctcacatggtactattggttctcctggtgcccgtggacctcctggatac
tctggacctgttggtcctcctggtgcccctggtctgcctggacctcccggccctgctggt
ggtggatacgacgtctctggatacgatgagtacagagctgatcagcccgctctgagagct
aaggattacgaggttgatgccacaatcaagtcactcaacacccagattgagaacctgctc
acccctgagggatccaggaagaaccctgcccgcacctgccgtgacatcaagctcagccac
cccgactggagcagcggattctactggattgaccccaaccagggctgcatcaacgacgcc
atcaaggtcttctgcgacttcaccactcgcgagacctgcatctatgcccaccctgagagc
atcgcccgcaagaactggttcagaagcaccgagggcaagaagcacgtctggttcggagag
accatcaacggtggtactgagttcacctacaacgatgagaccctcagcccccagagcatg
gctacccagctggctttcatgcgcctcctgtccaaccaggctagccagaacatcacctac
cactgcaagaacagcgttgcctacatggacggtgctagcggcagcctgaagaaggctgtg
gtgctccagggctccaacgatgttgagctcagggccgagggcaacagccgcttcaccttc
tccgtgctggaggacggctgcactacacacactggtgaatggagcaagacagtgattgag
tacagaacaaataaaccatctcgcctgcccatcctcgacattgcacctttggacattggt
ggagctgaacaggagtttggtttggacattggcccagtctgtttcaaataa
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