Mugil cephalus (flathead mullet): 125020472
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Entry
125020472 CDS
T08342
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125020472 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125020472 (cnot3b)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125020472 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125020472 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
125020472
NCBI-ProteinID:
XP_047461778
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All DBs
Position
14:22074900..22099454
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AA seq
983 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRYHI
RMLETILRMLDNDSVQVDSVRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDIPQSLVA
PSPPGHSHLEDEIFQPSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSSSSSSSSSSSSSSSVSGLTSSSLVSMATISVGGGGSGGGGGGS
GAGGGSGGNGHHGNSGNLLLSNTSAGSYSNATQQQLHPQQQQQQQQAKNSASSSSSSSSS
SSSSASSAPISIPSSSTNSHPFSSSSASSPPNVSAQGLFTSSSQPPPPTPPPPSGPASSS
NSLGLSLGLSLGGKGGVSGSIATSPISGSLGLSGMPASLGAMASLLSGSTPAPYAQAAAS
GAVGSGLPGSLGGVSTSSSSTSSSSFVGSIGGGSIAVGGPTSSTGGLLGTAPGGGGGVGS
IGSGILGLGSGQSGLQGSSLVSSSPVGSLAPGGGGGGVGVIGSNGGSSGSAGSGVVGGNS
ALSVRPPSRQKQNGSTSYSAVVADSTTDSALNSASQSQSSQPSSLTSTANQPKDTGSSLL
GSLSLSSSSPSPASYSEAKAVSGGGGGGGLLNGPMSYSQSSDSIKPQEPLSSLKSMAERA
ALSSGIEGDMSSLHLSQDIFPTSTTTPSGPPSAPQPSLSEVSIPPSLGVCPLGPVPLSKD
QLYQQAMEEAAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHSDTVEFYQRLSTET
LFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYE
KWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggagaaatagatcgatgtctgaaaaaagtagcggag
ggagtagaacagtttgaagacatttggcaaaagcttcataacgcagccaacgccaaccag
aaggagaaatatgaagcagacctcaagaaagagattaaaaagctccagcgtcttcgagac
cagatcaagacgtgggtggcatccaacgagatcaaagacaaacggcagctagtagagaac
cgcaaactcatagagacgcaaatggagcggttcaagatcgtggaaagagaaacgaagacg
aaggcgtactctaaagaagggctgggtctggcccagaaggtggatccggcccagaaggag
aaggaggaggtcggcacgtggctcacgaacacgatcgacacgttgaacatgcaggtcgac
cagtttgagagtgaagtggagtctctgtcggttcagaccaggaaaaagaaaggagacaag
gagaagcaggaccggattgaggagctgaagaagttcatcgagaagcatcggtaccacatc
cggatgctggagaccatcctccggatgctggacaacgactcggtgcaggtggactcggtc
aggaagatcaaggacgacgtggagtattacctggactcgtctcaggatccggactttgag
gagaacgagttcctctacgacgacctggacctggaagacattcctcagtcgctcgtggcc
ccgtctccaccgggacactcgcacctggaggacgagatcttccagccgtccagcagcacc
cccacctccaccacctcgtcctcacccattcccccgtcacccgccacttgcactacagag
aactcagaggacgacaagaagaggggacgttcaacagatagtgaagttagccagtcacct
gttaagaatggaaacccctcctcctcgttatcctcctcttcctcctcctcctcgtcctcc
tcctcctcatcgtcctcctcctcttcttcctccgtctcgggactgacctcatcctcactg
gtctctatggcgaccatctctgtggggggaggaggaagcggcggcggcggcggtgggagc
ggggccggcggcggctccgggggcaacgggcatcacggcaactctgggaacctcctcctc
tccaacacttccgccggcagctacagcaacgccacccagcagcagctccacccccagcag
cagcagcagcagcagcaggccaaaaactcagcgagctcctcctcttcctcctcctcctcc
tcctcctcctccgcctcctccgcccccatctccatccccagctcctccaccaacagccac
cccttctcctcgtcctcggcctcctcgccgcccaacgtcagcgcgcaggggctgttcacg
tccagctcccagccgccgccgccgacgccgccgccgccgtcgggtcccgcgtcctcctcc
aacagcctgggcctcagcctgggtctgtccctgggggggaaagggggcgtgtccggctcc
atcgccaccagccccatatccgggagcctgggcctgtcggggatgccggcgtccctgggc
gccatggcgagcctcctgtcgggctccaccccagcgccgtacgcgcaggcggccgcctcc
ggcgccgtgggctcggggttgccgggctccctggggggcgtcagcacctcctcctcctcc
accagcagcagcagcttcgtgggctccatcggcggcgggagcatcgcggtcggcggcccg
acgtcctccacgggggggctgctcgggacggcgccgggcggcggcggcggcgtgggcagc
atcggctccgggatcctcggcctgggctccggtcagtccgggctgcagggatcctctctg
gtctcgtcgagccccgtggggagtttagcgccgggcggcggcggcggcggcgtgggagtc
atcgggagcaacggaggcagctcaggatcagcggggagcggagtggtgggcgggaactcg
gcgctgtcggtccgaccgccgagcagacagaagcagaacggtagcactagttacagcgct
gtagtagcagacagcacgacagactccgccctcaacagtgccagccaatcacaaagcagc
caaccctcgtctttgacctccacagccaatcagcctaaagacactggttccagtttactc
ggctctctgagtttgtcgtccagttccccgtctccggcctcctacagcgaggccaaggcg
gtgagcggcggcggcggcggcggcggcctcctcaacggaccgatgtcctactctcagtcc
tccgacagcatcaagccccaagagcctctgagcagcctcaagtccatggccgagagagcg
gccctcagctcagggatagagggggacatgtcctccctgcacctcagccaagacatcttc
cccaccagcactactactccatcgggccccccctctgcaccccagccttcgttgtcagag
gtcagcatccccccgtcgttgggggtgtgtccgctgggaccggtccctctgtccaaagac
cagctctaccaacaggccatggaggaggcggcgtggacgcacatgccgcacccgtccgac
tccgagaggatcaggcagtacctgatgaggaacccctgccccaccctgcctttccaccac
caggtgccaccgcctcactccgacaccgtggagttctaccagaggctttccacagaaacc
ctcttcttcatcttctactacctggagggcactaaggcccagtatctggcagccaaagcc
ctgaagaagcagtcgtggaggttccacacaaaatacatgatgtggtttcagaggcacgaa
gagcccaagaccatcactgatgagtttgagcagggaacatatatttactttgactatgag
aaatggggccagcggaagaaggagggattcacgttcgagtaccggtacctcgaagaccga
gacctccagtga
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