Mugil cephalus (flathead mullet): 125020607
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Entry
125020607 CDS
T08342
Symbol
cicA
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125020607 (cicA)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125020607 (cicA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
125020607
NCBI-ProteinID:
XP_047461999
LinkDB
All DBs
Position
14:20647829..20686567
Genome browser
AA seq
2489 aa
AA seq
DB search
MKPLKKQGRRSPPSTRAKGGKRRGAGDAPEGGEKRDSDENQDRSRSPQSRTPSSFSSNSH
SDSSQVDLMMREREPSEGEGPHREGLSSETTVSLVMDPGKLSTSSSDDRPGRSAAGYGSH
CDSGGSSCSNSSTPSANNSPNPASSRKTATFKARVPKKKYTSEHCSSTTAGNHGNPASCT
PPPLTLCSSVPNQGSTGPGVDVGASHSDGNNQSRVLMEDFHRRTTGKEGPRDSPGPPTLL
LGVEREGPGGGGGGGGGGDGAMDAERVSPSPLPRCSSTDTASEHSADLEVVGDTHPITQM
SSHPRSLPDALSDALAKGLKNQRILARQLRRRSHEDGGVDKRDDGWSSNLVFRAGVVRKV
SGEYGSLEVQLNGEKTLCRYPYRHDSPPGVVDIILDAPPPGVHQIPTGTRVCVPFGNEDG
QEGQWQWYREGVVTRVDTHPAVANCYRVQLSEERSHSVDEEGESRGPPQAVWVSRQTLRL
LVPPWDLDLPSGGGREGDEGDRDKDREQEEREQMEVEQEVCLLNRQMNTGIGSMLGRGMP
YSGIVPVSSTSGHNIPSPVTQPFVPHLAPSREWEIEKDLERERDLQRKQERERERDNSVK
QQQQQQQQQQHHTYMPLTPEEDMEVSHFNMVPMGPIIPGAKPMTMSQHRHIVSKPPPGYL
NPHLSVVRGIGISPAHMPMNAHAPPSPVLLGLDPASAAAAAVGAVITTPQLPPLPPISSS
TTSSSRLEKASGGGSGSGGAGGGGGGGGGSGSGSTSSSSSRSRTPLTAAQQKYKKGDVVC
TPTGIRKKFNGKQWRRLCSREGCSKESQRRGYCSRHLSMRTKEMEASGGGRERGGASSTG
TLTPSDLRLGGGRASSEFDWDETSRESSEASSRGGDSRPRLVLPSLLPQDLSRFDFDECE
AATMLVSLGGSRSGTPSFSPISNQSPFSPTPSPSPSPLFGFRPANFSPITATSSRRHRHL
SGTKMGTPGAERERHLSGIVPTFQTNLTFTVPMSPSKRKLDSHPPPPLPSIQDYQTKPEQ
QQLVGVGGGMVGDPTQAHSPAAFRVLSPQSQPTTPSSLSFPRPRSATSRPPSSAASTPPP
MLVSPTPPSPLPQEPSPRRIVPLRDSPVIVRNPDVPLAKFSDGPLGRRERSRSRDQHQPQ
HAAPPGLQAPVPINGAATNGAVLLRNPTPTLVLVTSSSSLTPATAGHSSLSSPSTPGSMS
TSSGSVLSSSGSGGRERERKPEGHQDASGGPLPQPVACHPTPTALLPLILPAESSHPVPR
KQIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLEPSQSGAAVQPADGQQLVNQSKEPRFGV
ALVSEGRADAPDPDRGSPSCPAPTNDNPPADRGGADSETESDIDDPFSPGGANDAAPSTG
PIKRRTQSLSALPKDGDRKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILG
EWWYALGPNEKQQYHDLAFQVKEAHFRAHPDWKWCNKDRRKSLSEGRGTPKEPRERSMSE
SIDAHTESQVLEGKGGGPGWPGGSERRGGLLVGQHPRPRAFSHSAVHTLEQRERERDLEK
DDGAGLFRSRPPPQSLYQGGASEDVTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKER
VTDSDEDESDGQHGFQAAAAARSSLPSSSSSPPIPHSDSTSSKGNGGGGGGGGGGGAEDG
SEKKRSRGMDGGEEGSDGALKREEIATSGGDGSGGGGGGGVSSLSVAGSVSQAPLTLAQL
GGVRMASTMVTSVVRPIASTPIPIASKPAEGAVTLSSLPQDKKATLLIGGGGGGGPQQLP
IAAGGGYLSSSSSSSSSSSSSSSSSSSSSPGPVSVTPVGGSSLVTSLVLGGSFPAAQPLQ
LLTPQTPLPVLHPAAATSSPPQLTLANGVHSGAGIRVSPGTRVQTPSPVVQGNVLVPMAT
VRTGSTPPHPSISLVAPPLPVQNGPATGNKIIQLAPMPVVQTGVHPGGAAAVHPGSPFPV
SVATVMGPGAAPPHTVLLTSPPTRITYVQSSPGVTTATPQPGPQPPGPTYLAITPAGQTL
VQPIVGPPLSCQSQASPGQTAAASGRQVLTAIYPAPAVPLATGVVSVTAVPSSAAAPAQD
AMNPPSPPATGAQGSSVATPQPGAGLEVTVKSEVDSQADDGGQGLSSCAIGSSFATCASG
GVLTVKKEEDIKEEIVSRDGHGRERQSETDEERERGMRENSEKKRGRETEREDQTGKETG
PRTPPPPPPSSGLDPPPPPPSAERDPPSSSKKTKFRPPPLKKTPDSLEKVLSETYFEERF
AELPEFNPEEVLPSPTLQSLATSPRAILGSYRKKRRNSTELEPTAEEPSSPRRKTRRLSS
CSSEPNTPKSAAKCEGDIFTFDRAGPEAELPLGDLDRVPFSSLRRTLDQRRALVMQLFQE
HGFFPSAQATAAFQARYSDTFPNKVCLQLKIREVRQKIMQTATSGTLEAEASPAPSHSSS
FNQSAREDGGAEQQGDKGRSPEEPRSDGS
NT seq
7470 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgttaaaaaagcagggccggcgctcccctccctccacccgggccaaagggggg
aagcgtcgcggagcgggcgatgccccggaaggaggagagaagagagactctgacgagaac
caagacagaagcagatcccctcaaagccgaactccctcttctttttcctccaactcgcac
tcggactcgtctcaggtggatctgatgatgagggagagggagccgtccgagggcgagggg
ccgcaccgagaagggctgtcgtcggagacgacggtgtcgctcgtgatggatcccgggaag
ctgtcgacgtcctcctccgacgacaggccggggaggtcggcggcgggctacggcagccac
tgtgacagcggcgggagcagttgtagcaacagcagcacgccgagcgccaacaacagcccc
aaccccgcctccagccgaaagaccgccaccttcaaggcccgcgttcccaagaagaagtac
acctccgaacactgctcgtctactactgctggtaaccatggcaaccccgcatcctgcacg
cctcctcctcttactctgtgcagtagtgtccccaaccagggttcaacgggtccgggagtc
gacgtcggcgcctcgcactctgacggcaacaaccagagcagggttctgatggaggacttc
cacagaaggacgaccggcaaagaggggcctcgggactctccgggaccccctaccttgttg
cttggagtggagagggaaggacctggaggaggaggaggaggaggtggaggtggtgatggg
gcgatggatgcagagagagtgtcgcccagccccctgccacgctgttcctcaacagacacc
gccagcgaacactccgccgacctggaggtcgttggcgacacgcatcccatcacgcagatg
tcctcacatccacgcagcctccccgatgcactgtccgacgccctggccaaaggattgaag
aatcaacgcatcctcgcccgccagctcaggagaagaagccacgaggacggaggagtcgac
aagagggacgacgggtggagttcaaacttggtgttccgggccggcgtcgtccgtaaggtc
agcggcgaatacggaagcctggaggtacagctgaacggggagaagacactgtgtcgctat
ccgtatcgacacgacagccctccaggggtggtggacattatcctagatgcccccccacct
ggtgttcatcagatacccactggcactcgtgtctgtgtgccgtttggcaatgaagatggc
caggagggccagtggcagtggtaccgagaaggtgtggtgacccgggtagacacacaccct
gcggtggccaactgctaccgagtccagctctccgaggaaagatctcattctgtcgacgag
gaaggagagagcagaggtcccccccaggcggtgtgggtttcccgacaaacactccggctt
ctggtgccaccgtgggacctggatttaccatctggcggaggacgcgagggggacgaaggg
gaccgagacaaggaccgagagcaggaggaaagggaacagatggaggtggagcaggaggtg
tgtctcctgaaccggcaaatgaacactggcatagggtctatgttggggagagggatgccc
tactcaggaattgtccccgtttcctccacttcgggccacaacattccctcccccgtaact
caaccgttcgtcccgcacctggcccccagccgagagtgggaaattgagaaagacctggag
agggagagggacctccagaggaaacaggaaagagagcgcgaaagggacaacagcgtaaaa
cagcagcagcagcagcaacaacagcagcaacaccacacgtacatgccactcacccctgaa
gaagacatggaggtgtcccacttcaacatggttccaatggggccaatcatacccggggcc
aaaccgatgacaatgtcccaacaccgccacattgtctccaagcccccgcctggctacctc
aatccccacctgtccgtggtgcggggcatcgggatttcccccgcccacatgcccatgaac
gcccacgcccctccttcacctgtcctgttaggccttgacccagcatctgcagcagctgca
gcagttggtgctgtcattaccaccccccagctccctcccctgcctcccatctcctcctcc
actacatcctcatccagactagagaaggcctcagggggaggttctggcagcggcggagca
ggtggtggcggtggtggtggcggtggatccggctcgggttcgacctcctcctcctcgtcg
cgctcccgcactccgctgacggccgcccagcagaagtacaagaagggagacgtggtgtgc
acgccgacgggaatccgcaagaagttcaacgggaagcagtggaggaggctgtgctccagg
gagggctgctccaaggagtcccagcgacgaggatactgctccaggcacctctcaatgagg
accaaggagatggaagccagcggcggcggccgggaacggggcggagccagcagcacgggg
accctgacgccgtccgacctccggctgggcgggggtcgagccagctcggagttcgactgg
gacgagacgtcgcgggaaagcagcgaagccagcagccgcggaggagactcccgcccccgc
ctggtcctcccttcgctgctgccccaggacctctctcgatttgactttgacgagtgcgag
gcggcgaccatgctggtctctctgggcggctcccgctctgggacgccctcgttctccccc
atctccaatcagtcacccttctcccccaccccgtcgccctccccgtcgcctctcttcggc
ttccgccccgccaacttcagccccatcaccgcgacttcctcgcgccgccatcgtcacctt
agtggtactaagatgggtacgcccggtgctgagagagagcgccacctgtcagggatcgtg
cctacgtttcagaccaacctcacttttactgtcccgatgagccccagcaagaggaagctc
gactcccacccgcctcccccactgccttcgatccaggactaccagaccaaacctgagcag
cagcaactagtgggagtagggggtgggatggtgggagacccgacccaggctcacagcccc
gccgccttcagagtcctctccccgcagagtcaacccacaaccccctcctcgctctctttc
ccccgtccccgaagcgctaccagcaggccgccgtcctccgcggcctccacgccgccgccc
atgctcgtgtccccgactcctccctccccgctgccccaggaaccctcgccacgccgcatc
gtgcccctccgggactccccagtcatcgtccgcaacccggacgtcccgctggccaagttc
tccgacggccccctgggaaggagagagagaagcaggtcgagggatcaacaccagccccag
cacgcggctcctccgggcctccaggctcccgtccccatcaacggtgctgccaccaacggc
gccgtgctcctgcgcaaccccacacccacattggtcctggtcacctccagttcatccttg
actccagccacagccggccactcttccctctccagcccgtctacgcccgggtccatgtcg
acctcgtcgggctcagtcctgtcctcctccggttctggaggcagggagcgggagaggaaa
cccgagggacaccaggatgcctctggcgggccgctgccacagccggtggcctgccacccc
acgccgacggcgctgctgccgctcatactgccagctgagtcgtctcaccccgttccacgc
aagcagatcatcatgggacgcccaggcaccgtttggaccaacgtggagcctcgctcggtg
ccagtgttcccttggcactcgctcgtccctttcctggagcccagccaatcaggagcggct
gtgcagcctgccgacggccaacagcttgtcaatcagagcaaagagcctcgcttcggagtg
gccctggtgagcgaggggcgggcggacgctccagacccggacagaggatcgccgtcgtgc
cccgccccgaccaatgacaatcctcccgcagacaggggcggggccgacagcgagacggag
agcgacatagacgacccgttttccccgggtggggccaacgatgcagcgccttccactgga
cccataaagagacgcacacagtccctcagcgccctgcccaaggacggagacaggaagagg
gagaaggaccacatccgccgacccatgaacgcgttcatgatcttcagcaaacgccaccgg
gccctggtgcaccagcgacatcccaaccaggacaaccggacagtcagcaagatcctgggg
gagtggtggtacgctctgggtcccaacgagaagcagcagtaccacgatctggcctttcag
gtgaaggaggcccatttcagagcgcaccccgactggaaatggtgcaacaaggatcgccga
aagtctctttccgagggccgcgggaccccgaaggagccgcgagagaggagcatgtctgag
agcatagatgcccatacagagtcccaggtgctagaagggaaggggggaggcccgggctgg
ccggggggctcggagcgtcggggagggctcctcgtggggcagcacccccgtcccagagcc
ttttcccacagcgccgtgcacaccctggagcagagggagagggagcgagacctggagaag
gatgacggagccggtttgttccgcagccgtccgcctcctcagtccctgtatcagggcggc
gccagcgaggacgtgaccagcgacgaagagcgcatggtcatctgcgaggaagagggcgac
gatgatgtcatggaggattcgtgtcccgaaggctccatcgacctcaaatgtaaagagaga
gtgacggacagcgacgaggacgaatcagacggacagcatggcttccaggcggcggcggcg
gctcgctcttctctcccctcctcctcctcctctcccccgatccctcactccgactccacc
tcatctaaagggaacggaggaggcggaggaggaggtggaggaggaggtgccgaagatgga
tctgagaagaagagaagcagaggcatggacggaggagaagaagggagcgatggagctctt
aagagagaggagatagcaacaagtggaggagatgggagtggaggaggaggaggaggagga
gtctcctctttgtccgtcgcaggctcagtgtcccaggctcctctgactctggctcagctc
ggaggcgtccgcatggcgtccaccatggtgaccagcgtggtccggcccatcgccagcacg
cccatccccatcgccagcaaacccgcggagggagccgtcaccctcagctccctcccgcag
gacaagaaagccactctcctgattggaggaggaggcggaggcggacctcagcagctgccg
atcgccgcagggggtgggtacctctcatcctcctcctcctcctcttcctcctcctcctcc
tcctcgtcctcctcctcctcctcctcccccggtccagtcagtgttaccccggtgggaggc
agcagcctggtcactagcctagtcctgggagggtccttccccgctgcccaaccgttgcag
ctcctcaccccgcagacccccctacctgtcctccaccccgccgcggccacctcctcgccc
cctcagctcaccctggccaatggtgtgcactcgggggcgggaatcagagtcagccccggg
actagagtccaaaccccgtcgccggtcgtgcagggcaatgtgctggttcccatggcaaca
gtgagaaccgggtctactcctcctcatccttccatctccctggtggcccctcctcttccc
gtgcagaacggcccggcgacgggaaacaagatcatccagctcgctcccatgcccgtggtg
cagaccggcgttcaccccggcggcgccgcagccgtgcatcccgggagccccttccccgtt
tccgtggcaaccgtgatgggtcccggcgccgcgcccccacacaccgttctcctgacctcc
ccacccaccaggataacctatgtccagtctagcccgggagtcaccacggcaacgccccaa
ccgggcccccagcctccgggcccgacgtacctcgccatcacccccgctggccagaccctg
gtccagcccatcgtcggcccccccctcagctgtcagtcgcaggcttccccgggacagacg
gcggccgcctctggtcgtcaggtacttactgccatctaccctgcaccagccgtccctctg
gccaccggcgtggtctccgtgacagccgtgccgtcctcagcggcggctccagcccaggac
gcgatgaacccgccgtctccgccggcgacgggggcgcagggctcgtcggtggcgacgcct
cagcccggcgccgggctggaggtgacggtgaagagcgaggtggactctcaggctgacgat
ggaggtcaggggttgtcgagctgtgccatcggctcctcgtttgccacctgtgcgagcggc
ggcgtcctgacagtgaaaaaagaggaggacatcaaggaggaaattgtgagtcgggacgga
cacggccgagagagacagagtgagacggacgaagagcgagagcgagggatgagagagaac
agtgaaaagaagagaggcagagagacggagagggaggaccagacaggcaaagagaccgga
cctcgtactcctcctcctccgcctccatcctcaggtctggaccctcctcctccgcctccc
tctgcagagagggatcccccctcctcctccaagaagaccaagtttcgacccccgccgctc
aaaaagacgccggactctcttgaaaaggtattatcggagacgtacttcgaggagcgtttt
gctgagcttccagagtttaacccggaggaggtccttccctcgcccactctgcagagtctg
gccacttcgcccagagccatcctgggaagctaccggaagaagagacgcaactccacagag
ctcgagccgacagcagaggagcccagctccccgaggagaaagactcgccgcctgtccagc
tgcagctcggagcccaacaccccgaagagcgcggccaagtgcgagggagacatcttcacc
ttcgacagagcgggtccggaggccgagcttcctctgggagacttggacagggtccccttc
tcgtctctacgcaggacgctggaccagcgcagggccctggtcatgcagctctttcaggag
cacggcttctttccctcagctcaggccacggccgccttccaggcgcgctactccgacacc
ttccccaacaaggtgtgcctgcagctgaagatccgcgaggtccgtcagaagatcatgcag
acggccacgtccgggaccctcgaggccgaggccagccccgccccgtcccacagctcctct
ttcaatcaatcagcccgggaggacggaggggcggagcagcagggagacaaaggccggagc
cccgaggagccgaggagcgacggatcgtga
DBGET
integrated database retrieval system
