Mugil cephalus (flathead mullet): 125020803
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Entry
125020803 CDS
T08342
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125020803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125020803
03036 Chromosome and associated proteins [BR:
mcep03036
]
125020803
Transcription factors [BR:
mcep03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
125020803
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125020803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125020803
NCBI-ProteinID:
XP_047462263
LinkDB
All DBs
Position
15:complement(3482180..3506488)
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AA seq
1903 aa
AA seq
DB search
MSAAMLSTSTSKLNVLVNKLHEYLANSAVEGSNGTPTSEDADGLTDMTRLMGKSAHHALT
EAGADSRFSRRKPSVVTKHSGLDESGDSNASEDLDLPASANGHFDITRLPKGTVLVRPEA
VDLGRDDFRGPEFRKSNVLRKDFSRRRGGVEPMPIVSCTACGRQVNNFRKDSLYRHPVLK
VLICKSCYNYYSSDDISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILRNLGRKEL
SSILESKWYCYVCSPEPLFDLVMACDSVLDMERLWRRQRKKNRVGPEKSELYDMLSNSSQ
NLPLDKWDHSGMDGNVVFNYNTLQISKDITKKAKHLVDSANALNQTFVSFLHTVTTNKQT
PGVRNLYLNSFLAVVKGLRKSLALLEESLKEEFSDLDVLSTWEKFLSNDALVTEADAEVD
ISDEKCLSKLQKLAGEHLDENDSDSKGFVDGRNPLKCPRKDMDSLEASQGEQKSGLKSAE
RRVDMSKKLVVQLTPVALKQGQSSDPPMMEVDLHKKDRKSKEKHAPEDVETGDVGTKADS
KLSNNNSSVSLFHEDEKGHRRSPRVKTTPLRRPSDVTTKTSLSAEHSDSDSDPEETSNTA
PAKNTEEEGMSRARDDSDSDEVPAALLERAAITQSSDEAQSDEDTGKVSPAKVAKKCLFW
LTKNTPMSPDKIRRKRKILERSSDSDLSNRRVKARQESGTDSSSDEQDSQKEIKHLNTLR
TIGKPHLAKREEEGVARKKGRMQAGKSTTKSCHAPMDSSSSTSSSEDEHNDDSGSDGSDQ
KMKPITEDVTLLGAAAFHQSSGDEEQSGPSWAAEDDDDPENRIAKKMLLAQIKANYSSGD
DISSDEESREEDSEAEFSKEVKEGNADNGTDENGADLSSESSDATASRPVASHYLLRHKL
TLDNQTSGDTPKSEQEQKRASRECKTSDSDSTNLSNEFGDDGEDGMMEVLSLSEDEASED
DFKSTRKAKDADRSEKKTSVTCIWLSDSSDEKQSDQEDADKEASDSKGTPKGRRKIRKII
GDESLRAETQEALREEEERCKRLANRDQQMEDRREIIVIQDELSQVVCPVTTKLILDQDE
ETKMPLVQVHRNLVTKLKPHQVDGVQFIWDSCCESVKKANSSPGSGCILAHCMGLGKTLQ
VVAFLHTVLLSTNLRFKTALVVCPLNTILNWLSEFKKWQSSMGEDKVMVTELTSIRHPHE
RLRALQRWQKFGGVMLMGYEMYRILSQCHKIKDEVSKEEFKRALVDPGPDFVVCDEGHIL
RNEASNVSKALNGIKTQRRVVLTGTPLQNNLVEYHCMVNFIKKSLLGSLGEFRNRFINPI
QNGQCADSTPKDVRVMKKRAHILYSVLGGCVQRRDYSELTQFLPPKHEYVLAVRISPLQY
KLYQYYLNHITGVSSITYRLKRAGANLFKDFQVLSRIWTHPWCLQLSYMSKDKKGCFEKK
NTSKTADLFRNAETAVAESELKENEGNNNDNSAMIADAAKVFPAVEGENADVSLRSQIDE
GWYKNLLSDSDAKILEHSGKMVLLFEILRMAEDLQDKVLVFSQSLISLNLIEDFLKASHH
ARDQSFKAGSWIKNVDYYRLDGSTSAALRKKWADQFNNKANVRGRLFLISTRAGSLGINL
VAANRVIIFDASWNPSYDIQSIYRVYRFGQLKQVFVYRFLAQGTMEEKIYDRQVTKQSLS
FRVVDQQQIERHFTLSELTELYIFEPDLLDEPNSKKSKRLASLLPKDDVLAQLLETCKNQ
IVSYHEHESLLDHKQEEELSEAERKDAWAEYEAESHSASVPVGSIQKTLYTKTNEELIEM
LNQTRKNVSVAFMDLQKIKFYPLEAYVLQVRQQYPDLSEELVKSKAEDWKQYDEKRKGHS
QLVYRDTLTKQQTLTLSIQAILNSRRSQENQMAATAVNQAGQI
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcgatgctgagcacctcgaccagcaagctgaatgtattggtcaacaagctt
catgaatacttggctaattcagctgttgagggcagcaatggcacaccaacatccgaggat
gctgatggtctgacagatatgacccgtttgatgggaaaatctgcgcatcatgctttgaca
gaggctggtgctgatagcagattctcaaggagaaaaccttcagttgtcacaaagcactcc
ggactggatgaatctggggactcaaatgcaagtgaggacttggatttaccagccagtgca
aatggtcactttgatatcacaagattgcctaaaggcactgtgctggtcaggcctgaagca
gttgaccttggaagagatgatttcaggggtccggagttccgcaagtccaatgtactgcgg
aaagacttttcaagaagacgtggaggagttgaacccatgccaattgtaagttgcactgct
tgtggccgacaagttaacaacttccggaaggactccttatatcgacatccagttctgaaa
gtacttatttgcaagtcttgctataactattattcaagtgatgacatcagtaaggatgga
gacgggatggacgagcagtgccggtggtgtgccgaaggaggcaacctgatctgttgtgac
ttctgtagtaacgctttctgcaagaaatgtattctgaggaatcttggaaggaaggaactg
tccagcatcttggagagcaaatggtattgctacgtgtgtagtccagaacccctttttgac
ctggtgatggcttgcgacagtgtcctggacatggagcgcctgtggcgtcggcagcgcaag
aagaatcgagtagggccagagaaatcggaactttacgacatgttgtcaaactcctcacaa
aacctacctttggacaaatgggatcacagtggtatggatggaaatgtagtgttcaactat
aacacactgcagatttccaaggacattaccaagaaggccaaacatttagtggactcagct
aacgccttaaaccaaacttttgtcagttttcttcatactgtgacaacaaacaaacaaaca
cctggtgttcgtaatctttatctgaactcttttttggctgtagttaaaggcttacgaaaa
tctctggcattactggaggaaagccttaaggaagaattcagtgacttggatgtgttgagc
acttgggagaagttcttaagcaatgacgcacttgtgacagaagcagatgcggaagtggat
atctctgatgaaaaatgcttgagcaaattgcagaagttggcaggtgaacatctggatgaa
aacgattcggactccaaggggtttgtagatgggagaaatccactcaagtgccccaggaag
gacatggattcccttgaagcaagtcagggagagcaaaaaagtggccttaagtctgctgaa
agaagggttgacatgtctaaaaagctagtggtacagcttacacctgtagctttgaaacag
ggacaatcatctgatccccccatgatggaggtagacctccacaagaaagataggaaatca
aaagaaaaacatgcacctgaagatgtagaaacaggtgatgtaggcacgaaagctgacagc
aagctgagcaataacaactcaagtgtgtcactatttcatgaagatgaaaaaggccataga
cggtctcctcgtgtgaagacgactcctttgcgtcgaccaagtgatgttaccactaaaacg
tccctttctgcagaacacagtgacagtgactctgaccctgaggaaacatccaacactgcg
cctgccaaaaacactgaagaagaaggtatgagcagagcgagggatgactccgactcagat
gaagtccccgctgcgctgctggagcgagcagcaataacacaaagctcagatgaagcccag
agtgacgaggacactggtaaagtgtcaccggctaaagtggccaagaaatgtctcttttgg
ctcactaagaacaccccaatgtcaccggacaagatccgccgaaaacgcaagatactggag
cgctctagcgactcagacttgagcaacagaagggtaaaagccagacaggaaagtgggaca
gattcttctagtgacgaacaagactcacaaaaggaaataaaacacttaaatacgttacgg
acaatagggaagcctcacctggccaaaagagaggaggaaggcgtggctagaaagaagggt
aggatgcaagctgggaagtctacgactaaatcttgtcatgcaccaatggactcttcatcg
tcgacgtcatcaagtgaagatgaacacaatgatgactctgggagtgacggaagtgatcaa
aagatgaagccaatcacagaagacgtgaccttactaggagctgcagcattccaccaatca
tcgggagatgaggagcagtctgggccctcgtgggcagcagaagacgacgacgatccagaa
aatagaatcgctaagaaaatgcttttggcccaaattaaagccaactactcctcgggtgac
gatatctcttcggatgaggaatcacgggaggaagactctgaggcggagttcagcaaggag
gtcaaagaaggcaacgcggataatggaacagatgaaaacggggcagatttgtcttcagaa
tcatccgacgccacggctagtcggcccgtcgccagccattatcttctccgccacaaactc
actttagataatcagacatccggagacacacctaagagcgaacaagagcaaaaacgagcc
agcagagaatgcaagaccagtgatagtgacagtactaacctcagtaatgagtttggtgac
gatggtgaagatgggatgatggaggtgctgagtctgtcggaggatgaagctagtgaagac
gactttaaaagcaccagaaaggcaaaggatgcagatcgttctgaaaagaagacatcggtc
acctgcatttggttgtctgactccagcgatgaaaagcagagcgatcaagaggatgcggat
aaggaggccagcgacagtaaaggaacacccaagggacgcagaaagatccgaaaaatcatt
ggcgatgaaagcctccgtgctgagacccaggaagccctcagggaggaggaggagaggtgc
aaacgtttggcaaatagggatcaacagatggaggatagaagagagataattgtgatacaa
gatgagctgtctcaagtggtgtgtcccgtcacaaccaagctgatcctggatcaggacgag
gagaccaagatgcctcttgttcaggtgcacaggaacctggtgacgaaactaaagcctcac
caagtggatggcgtccagtttatttgggactcttgctgtgagtctgtgaagaaggccaac
tcttctccaggatcaggctgtatactggcacactgcatggggttaggaaagactctgcag
gtagttgcgttcctccacactgtgttgctgtcaacaaatctgaggttcaaaaccgccttg
gtcgtgtgtccactgaatacgatccttaactggctcagtgagttcaagaaatggcaaagc
agcatgggagaagataaagtgatggttacagaactgacttcaataaggcatccccatgaa
cgacttagagctctgcagaggtggcagaaattcggaggcgtcatgttaatgggttacgag
atgtaccgcatcctgtcacagtgccacaaaatcaaggacgaggtgtcaaaggaagagttc
aagagagcactggtggatccaggtccagactttgtggtttgtgatgaggggcacatcctt
cgcaatgaggcttccaatgtctccaaagctttgaacggcatcaagacgcaaagaagagtg
gtgctaactggaacaccgctacaaaacaaccttgttgagtaccactgcatggtcaatttc
ataaagaagagtcttctgggctcactgggcgaattccgaaaccgctttataaaccccata
cagaacggccagtgtgctgactccacacctaaagacgtcagagtcatgaaaaagcgagct
cacattctttattcggtgttggggggatgcgtgcagagaagagattactctgagttgaca
cagtttcttcctcccaaacacgagtatgtgctggcagttaggatttcaccgcttcagtac
aagttataccagtactacctcaaccatatcacaggtgtgagctccataacttacagatta
aagagggctggagcaaacctgttcaaggactttcaagtgctcagccgaatttggactcat
ccatggtgccttcagctcagctacatgagcaaagacaagaagggatgttttgaaaagaaa
aatacatctaaaacagcagatttgttcagaaatgcagaaaccgctgtggctgagagtgaa
ctgaaagagaacgaagggaataacaatgacaacagtgccatgattgctgatgcagccaaa
gttttccctgcagtggaaggagagaacgcagatgtcagcttgaggtctcagattgatgag
ggctggtacaagaatcttctgtccgacagtgacgccaaaatcctggagcactcggggaag
atggtgctcttgtttgagatcctcaggatggctgaagacctgcaagataaagtgcttgtg
ttcagtcagtccttgatctcattaaacctgatcgaggatttcttgaaggcatctcaccat
gccagggaccaatcatttaaagcgggcagctggatcaaaaatgttgattactatcgtctg
gatggttccaccagcgctgcgttaaggaagaaatgggctgatcagttcaataataaagcc
aatgtccgtggccgattgtttctcatctcaacgagagcaggctcacttggtatcaacctc
gtggctgcaaacagagtcatcatctttgacgcttcatggaatccctcatatgacatacag
agcatctacagagtgtaccgctttgggcagctcaaacaagtgtttgtgtaccgattcttg
gctcagggcaccatggaggagaagatctatgaccgtcaggtgaccaagcagtctttgtcc
ttccgagtggtggatcagcagcagattgagagacatttcaccctttctgaactcactgaa
ctctacatatttgagccagatctgcttgacgaaccaaactccaagaaaagcaagagactc
gcctctcttttgccaaaggatgatgtcctagcacagctattagaaacctgtaaaaaccag
atagtgtcataccatgagcatgaatccctgctggaccacaaacaagaggaagaactcagt
gaggcagaacgcaaagatgcttgggctgagtatgaagctgagtcacactcagccagcgtt
ccagttggctccatccagaagaccttgtatacaaagaccaacgaagagctaatcgagatg
cttaaccaaaccagaaaaaatgtgtccgtggctttcatggatctgcagaaaattaagttt
taccctctcgaggcctacgtgttgcaagtgcgtcaacagtatcctgatctgtctgaggag
ctggtaaaaagcaaagctgaggactggaaacaatatgatgagaagaggaagggacactca
cagcttgtttacagagacactcttacaaagcagcaaacactcaccctcagcattcaggcc
atactgaacagccgaagaagtcaagagaatcagatggctgccactgctgtgaaccaggct
ggacagatttga
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