KEGG   Mugil cephalus (flathead mullet): 125020973
Entry
125020973         CDS       T08342                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
mcep  Mugil cephalus (flathead mullet)
Pathway
mcep03030  DNA replication
mcep03410  Base excision repair
mcep03420  Nucleotide excision repair
mcep03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mcep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125020973 (rfc3)
   03410 Base excision repair
    125020973 (rfc3)
   03420 Nucleotide excision repair
    125020973 (rfc3)
   03430 Mismatch repair
    125020973 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcep03032]
    125020973 (rfc3)
   03036 Chromosome and associated proteins [BR:mcep03036]
    125020973 (rfc3)
   03400 DNA repair and recombination proteins [BR:mcep03400]
    125020973 (rfc3)
DNA replication proteins [BR:mcep03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    125020973 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    125020973 (rfc3)
Chromosome and associated proteins [BR:mcep03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    125020973 (rfc3)
DNA repair and recombination proteins [BR:mcep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     125020973 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    125020973 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Rad17 AAA AAA_22 nSTAND6 AAA_16 Sigma54_activ_2 AAA_5 ABC_tran
Other DBs
NCBI-GeneID: 125020973
NCBI-ProteinID: XP_047462639
LinkDB
Position
15:complement(13301394..13305186)
AA seq 356 aa
MSLWVDKYRPTSLSKLDYHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKRIEINTIASNYHLEVNPSDAGTQDRVVIQELIKTMAQSQQ
IQTSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILYSTSTSKVIGPIRSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKQISEKSGRNLRKAILMCEACRVQQYPF
SVDQNVPETDWEVYLRETANAIVSQQSPHRLFEVRARVYELMTHCIPPDIIMKGLVKELL
SNCDGQLKTEVAHMAAFYEHRLQQGNKAIYHIEAFIAKFMAIYKKFMEDGLDAMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtctgtgggtggacaaataccgaccgacgtccctctcgaagctcgactatcacaaa
gagcaagcgactcagctgaaaaacctggttcaatgtggcgacttcccacacctgttggtc
tacggcccgtcgggtgcggggaagaagacccgcatcatgtgtctgctgagggagctgtac
ggagctggggtggagaagcttcgcatagagcatcagactattgtggctccctcaaagaag
aggattgagatcaacacaatagccagcaactatcacttggaggtcaacccaagtgacgcg
ggaacccaggaccgtgtggtgattcaggagctgattaaaactatggctcagtcccagcag
atccagacaagcacccagagagagttcaaagtggtgctgctcacagaggtggacagactc
acgaaagacgcccagcacgccttgcgtcgaacgatggagaagtacatgtccacctgtcgt
ctcattctctactccacctccacctctaaagtcattgggccgattcggagccgttgcctg
gctgtgagagttcctctgccgagcacagaagaggtgtgcagcgtcctgacctccgtctgt
aagaaggagggtctgctcctcccacctgagctggccaaacagatcagcgagaagtctggc
cgcaacctccgcaaagccattttgatgtgcgaggcctgcagagtgcagcagtatccgttc
tcggtggaccagaacgtccccgagacggactgggaggtctacctcagagaaacggccaat
gccatcgtcagccagcagagtcctcacaggttgttcgaggttcgagctcgggtgtatgag
ctgatgactcactgcatcccccctgacatcatcatgaagggtctggttaaagaactgctg
agtaactgcgacggccagctgaagacggaggtggcccacatggcggctttctacgaacac
cgactacagcagggcaacaaagccatctaccacatcgaggctttcatcgccaagttcatg
gccatctacaagaagttcatggaggacggcctggatgccatgatgttttga

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