Mugil cephalus (flathead mullet): 125020973
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Entry
125020973 CDS
T08342
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03030
DNA replication
mcep03410
Base excision repair
mcep03420
Nucleotide excision repair
mcep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125020973 (rfc3)
03410 Base excision repair
125020973 (rfc3)
03420 Nucleotide excision repair
125020973 (rfc3)
03430 Mismatch repair
125020973 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcep03032
]
125020973 (rfc3)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125020973 (rfc3)
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125020973 (rfc3)
DNA replication proteins [BR:
mcep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125020973 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
125020973 (rfc3)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125020973 (rfc3)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125020973 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
125020973 (rfc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA
AAA_22
nSTAND6
AAA_16
Sigma54_activ_2
AAA_5
ABC_tran
Motif
Other DBs
NCBI-GeneID:
125020973
NCBI-ProteinID:
XP_047462639
LinkDB
All DBs
Position
15:complement(13301394..13305186)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLSKLDYHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKRIEINTIASNYHLEVNPSDAGTQDRVVIQELIKTMAQSQQ
IQTSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILYSTSTSKVIGPIRSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKQISEKSGRNLRKAILMCEACRVQQYPF
SVDQNVPETDWEVYLRETANAIVSQQSPHRLFEVRARVYELMTHCIPPDIIMKGLVKELL
SNCDGQLKTEVAHMAAFYEHRLQQGNKAIYHIEAFIAKFMAIYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtgggtggacaaataccgaccgacgtccctctcgaagctcgactatcacaaa
gagcaagcgactcagctgaaaaacctggttcaatgtggcgacttcccacacctgttggtc
tacggcccgtcgggtgcggggaagaagacccgcatcatgtgtctgctgagggagctgtac
ggagctggggtggagaagcttcgcatagagcatcagactattgtggctccctcaaagaag
aggattgagatcaacacaatagccagcaactatcacttggaggtcaacccaagtgacgcg
ggaacccaggaccgtgtggtgattcaggagctgattaaaactatggctcagtcccagcag
atccagacaagcacccagagagagttcaaagtggtgctgctcacagaggtggacagactc
acgaaagacgcccagcacgccttgcgtcgaacgatggagaagtacatgtccacctgtcgt
ctcattctctactccacctccacctctaaagtcattgggccgattcggagccgttgcctg
gctgtgagagttcctctgccgagcacagaagaggtgtgcagcgtcctgacctccgtctgt
aagaaggagggtctgctcctcccacctgagctggccaaacagatcagcgagaagtctggc
cgcaacctccgcaaagccattttgatgtgcgaggcctgcagagtgcagcagtatccgttc
tcggtggaccagaacgtccccgagacggactgggaggtctacctcagagaaacggccaat
gccatcgtcagccagcagagtcctcacaggttgttcgaggttcgagctcgggtgtatgag
ctgatgactcactgcatcccccctgacatcatcatgaagggtctggttaaagaactgctg
agtaactgcgacggccagctgaagacggaggtggcccacatggcggctttctacgaacac
cgactacagcagggcaacaaagccatctaccacatcgaggctttcatcgccaagttcatg
gccatctacaagaagttcatggaggacggcctggatgccatgatgttttga
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