Mugil cephalus (flathead mullet): 125021355
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Entry
125021355 CDS
T08342
Symbol
hmgb1a
Name
(RefSeq) high mobility group protein B1a
KO
K10802
high mobility group protein B1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03410
Base excision repair
mcep04140
Autophagy - animal
mcep04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125021355 (hmgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125021355 (hmgb1a)
09143 Cell growth and death
04217 Necroptosis
125021355 (hmgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcep03036
]
125021355 (hmgb1a)
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125021355 (hmgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcep04147
]
125021355 (hmgb1a)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
125021355 (hmgb1a)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
125021355 (hmgb1a)
MMR (mismatch excision repair)
Other MMR factors
125021355 (hmgb1a)
Exosome [BR:
mcep04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125021355 (hmgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
125021355
NCBI-ProteinID:
XP_047463338
LinkDB
All DBs
Position
15:complement(13047525..13051451)
Genome browser
AA seq
206 aa
AA seq
DB search
MGKDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSAKEKGKFE
DLARQDKARYEREMMSYVPARGGKKKKYKDPNAPKRPPSAFFIFCSEFRPKVKGESPGLT
IGDVAKRLGEMWNSTAAEDKQPYEKKAAKLKEKYEKDVAAYRAKGKTGGGAPGKAPAKAE
KKDDDDDDDDDEDEEEEDDDDDDDDE
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggatccgaccaagccgcgggggaagatgtcctcctatgcgtattttgtccag
acctgtcgggaggagcacaagaagaaacaccccgaagcttcggttaactttgcagaattc
tccaagaagtgctccgagcgatggaagacaatgtctgccaaggagaaaggtaaatttgag
gacctggccaggcaggacaaggctcgctacgaaagggagatgatgagctatgttccagcc
aggggaggcaagaagaagaagtacaaggaccccaatgcccccaagagacccccatccgcc
ttcttcatcttctgctcggagttccgccctaaggtgaaaggcgagagccccgggctgacg
atcggagacgtcgccaagaggctgggcgagatgtggaacagcaccgctgcggaggacaag
cagccctatgagaagaaggcagctaaactgaaggagaagtatgagaaggacgtcgccgcg
taccgcgctaagggcaagacaggcggcggagcacccggaaaagcccccgccaaggcagag
aagaaggacgatgacgacgacgatgatgatgatgaagacgaggaggaggaggatgacgac
gacgatgatgatgatgagtag
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integrated database retrieval system
