Mugil cephalus (flathead mullet): 125021472
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Entry
125021472 CDS
T08342
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125021472 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125021472 (nup98)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125021472 (nup98)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125021472 (nup98)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125021472 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
125021472
NCBI-ProteinID:
XP_047463515
LinkDB
All DBs
Position
15:complement(24634697..24658802)
Genome browser
AA seq
1836 aa
AA seq
DB search
MFNKSFGTSFGGGTGGFGTSSTFGQQNAGFGATGGFGTSAFGATNNTGGLFGTTPNKPGG
LFGSSTFNQPATSSTSTGFGFGAASGTTTGLFGNTGTGTSGGLFNQQNNAFGANKPSSFG
SFGTSTSSGGLFGATNTTANPFGGTNSLFGGSGFSAAQQPGTTVKFNPPTGSDTMVKAGV
TSSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPANPMAAPGAGGLFGGATATSSAA
TGLFGSAAPNTSFSFGPNKSTFGAAPAAGFGTTTGGLFSQPTQQAAGSLFKPFGATTTAP
STSFSFGNTNTMGQPNTSGMGLFGNTTPAQSGGLFGATQTSTATGFGNTGLFGQPNAGFG
NVGTQPSLFGNKTAGFGTTTTSAPSFGTGTGLFGNKPTLTLGTGTNTSTFGFGGNPAGGS
LFGNKSTTGGLGTGLGTSFGTAVGAGPTLFGNNQNKLGSALGTMGTFGATGFNSGASTLG
FGAPQQPVALTDPNAAASQQAMLQQQLSVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNP
TAQKALTTPTHYKLTPRPATRVRPKALTSSGASKSQLFDGLDDDEPSLTNGAFIPRKSIK
KLVLKNLNSSQYSSPVSKEADDLASPPEYPQNGNSPVEEDEELREVPGPSGRADDDPEVT
QFYVNPIAKPIPQGRVQTSLQDTISDLNMHKVSRNGLELSSDDVSASLGEESLQEDREEE
QEVQQSPHPAGIVLNRVGYYTIPSMDDLAEMVDENGDCVVENFTVGRKGYGSVFFPGEVN
VSGLNLDEIVHFRRKEVIVYPDDKNKPPEGAGLNRRAEVTLDGVWPNDKTTCTQIRSPER
LGDMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEDEDVPLKTDPKK
LKTAASLPPSQQQVAPQAQSNVVLDVLGGGGGGGGGGGGELDSDMADITQSFPTESMLGG
EEEAEPVLGETDAANRKLGGLTSMDMDGVSASSHMASSLGINPHTLQIMKASLFTEDDDE
CDTFQDQSFMKTSADVSSPRLIIPGAQGRPSVGGLLQARFSSGLFSQMSDSPRPPLPLPS
SSLGVDSSRSSFPWAESVPSSFQLPSRAPEPPIRTVGARRLGGPVPIKESVTQGKGGLLM
DTGLVAVRSFRVGWGPGWTLAHCGGRLSSASSSQPQRHELTAKTDFSFLPKPSRSKPLTE
SPYKVVLEQVVGLELQPLKPSEEEEAEDEEAVLQRPLEISLKHSSVAAVDGSSCPLVRPQ
LGVAALHEYAEWITELKEKQGDADPVLCYWAEVWTLCEALWGKLGPPDQDPDAETPSDYE
QQLERRRTFSAWLSRGAASRVEEEVALAAKGRHTDAIFSYLTGNCISEACRLAQKEGDHR
LSLLLSQATGSQFSRDLLGLQLADWNRMQTDCFLSEERLRIFALLAGKPVWQSSDSVVNV
CSELDWKRCVAVHLWFMLPPTASVADALGKYEDAFQGSCEGGKYAVAPLPPYLEEEQPDL
EEEEEEEEPKRPLYDLCFHLLKLYSDRHYSLQQLLDPLTVTWGRLDYRLSWHLWDVLQAL
HYSHLSASRQGLVHSSYAAQLESAGLWHMAVFILLHIPDHTLRERAVREMLALHCPLQET
EESVRRQRFLTERLLIPEQWIHEAKATRALRHADRPQQALHLYRAGYWNQCHRLLIQHLA
SDCIINDNHDYLLEFLEGLAVPEHSATIQDWDTAGRVYLDYIRVLKSLQDIQQAENAGYQ
LERLYTDVTSLCSRIELLPCSTARDRLAQSEMAKRVANILRVVLRLQQGDAASDSAAVPL
ARLAPHISRLPMPEDYTLEELRGLTQSYLRQLIVSQ
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtctttcggtacttccttcggtggagggacgggggggtttggaacctct
tccaccttcggtcagcaaaatgctggtttcggggcgacgggcggttttgggacgtcagca
ttcggagcgaccaacaacacaggaggattgtttggaaccacccccaataaaccaggaggc
ctgtttgggtccagtaccttcaaccagccggcgacgtcctccaccagcaccggcttcggc
ttcggagccgccagtggtacgaccaccggcctgttcggaaacacggggaccggcaccagc
ggaggactcttcaaccaacagaacaacgcattcggcgccaacaaaccgtcgtcctttgga
agctttgggacgagcaccagcagcggtggactctttggagccaccaacaccaccgccaac
cccttcggtggaaccaactccctgtttggaggctccgggttctcggccgctcagcagccg
ggaaccaccgtgaagttcaaccctccgacgggaagtgacaccatggtgaaggccggcgtg
acctccagcatcaacaccaagcaccagtgcatcacggccatgaaggagtacgagaacaag
tccctggaggagttgaggctggaggactaccaggcgggcaggaagggccccgccaacccg
atggcggctccaggggccgggggtctttttggtggagccacggccacgtccagcgccgcc
accggcctcttcggctccgccgcccccaacaccagtttctcctttgggccgaataagagc
acgttcggagcagctccagccgccggcttcggtacgaccacgggcggcctgttcagccag
cccacccagcaggcggccgggagcctcttcaagcccttcggcgccaccaccaccgccccc
agcaccagcttctccttcggcaacaccaacacgatggggcagcccaacaccagcggcatg
ggtttgttcgggaacacgacgccggctcagtccggcggtttgtttggagccactcagacc
agcacggccaccggctttggaaacactggcttgttcgggcagcccaacgctgggtttggg
aacgtcggcacgcagccaagtttattcggtaacaagacggccgggttcggaaccaccacc
accagcgccccgtcctttgggaccggcaccgggctctttgggaacaagccgaccctcaca
ctgggaaccgggaccaacacgtccaccttcggttttggtgggaacccggctggagggagt
ctgtttggaaacaagtcgaccaccggaggactcggcaccggactgggaaccagctttggg
acagcagtgggagcgggaccgaccctgttcgggaacaaccagaacaaactgggctccgct
ctgggaacgatgggaacgtttggagcgaccggattcaacagcggcgcgagtaccctgggc
tttggagctccacagcaacccgtcgcgctgacggatccgaacgccgccgcctcccagcag
gcgatgctccagcagcagctcagcgtcctggcgtattccccctacggagactcgccgctg
ttcaggaacccgctgtcagaccccaagaagaaggaggagcgtctgaaaccgaccaatccg
acggcccagaaggctctgaccacgcccacccactacaagctgaccccgcgcccggcgacc
cgagtccggcccaaagcgctgacgtcgtccggggcctcgaagtcgcagctcttcgacggg
ctggacgacgacgagccctcgctcaccaacggagccttcatcccgaggaagagcatcaag
aagctcgttctgaagaacctgaacagcagccagtacagcagcccagtcagcaaggaggcc
gacgacctggcgtcaccaccggagtatccacagaacggaaacagcccggtggaggaggac
gaggagctgagggaggtgccgggtcccagcggccgagcggacgacgaccccgaggtgacc
cagttctacgtgaaccccatcgctaagccgatcccacagggccgagtccagaccagcctg
caggacaccatcagcgacctcaacatgcacaaagtgtccaggaacggcctggagctgagc
agcgacgacgtctcggcttctctgggggaggagtcactgcaggaggacagggaggaggag
caggaggtgcagcagtctcctcatcctgcaggcatcgtcctgaaccgtgtgggttattac
accatcccgtccatggacgacctggctgagatggtggacgaaaacggagactgtgtcgtg
gagaatttcaccgtcggacgcaaaggttacggctccgtcttcttccccggtgaggtcaac
gtgtcgggactgaacctcgatgaaatcgtccacttcaggcgtaaggaggtcatcgtgtac
ccggacgacaagaacaagccgccggagggggcgggtcttaacaggagggcggaggtgact
ctggacggggtttggcccaacgataagacgacctgcactcagatccggagccccgagcgt
ctgggcgacatgaactacgagggccggctggagaaggcctcacggaaacagggagctcgc
ttcctggagtaccggcccgagaccgggtcctgggtgttcgaggtcgcccacttttccaaa
tacggcctccaggactctgacgaggacgaggacgtcccgctgaagaccgaccccaagaag
ctgaagacggcggcgtctcttcctccctcccagcagcaggtggcgccacaggctcagtcc
aacgtcgtcctggacgtcctgggaggaggaggaggaggaggaggaggaggaggaggggag
ctggacagcgacatggccgacatcactcagagcttccccacagagagcatgctgggagga
gaggaggaggcggagccagtcctgggggagacggacgccgccaacaggaagctgggaggt
ttgacgtccatggacatggacggtgtctcagcgtccagccacatggcctcgtccctgggg
atcaacccccacaccttacagatcatgaaagcttctctcttcactgaggacgacgatgaa
tgtgacacgttccaggaccagagcttcatgaaaacctccgctgacgtttcgtctcctcgg
ctcatcatccctggagctcagggccggccctcagtcggtggtctcctccaggctcggttc
tcctcaggcctcttctctcagatgtcagactccccccgtcctcctcttcctcttccttcg
tcgtcgctgggggtcgactcctcccgctcctccttcccgtgggccgagtcggtgccgtcc
tccttccagctgccctcccgagctccggagccgcccatcaggacggtgggggcccggcgt
ctgggggggcccgtccccatcaaggagtctgtgacccaggggaagggaggcctgttgatg
gacaccggcctggtggcggtgcgctccttcagggtgggctggggccccggctggaccttg
gcccactgtggcggccggctgagctccgcctcctccagccagccgcaacgccacgaactc
acggccaagacggacttcagcttcctgcccaaaccctccaggagcaaaccactgaccgag
agcccgtataaagtggtgctggagcaggtggtgggtctggagctgcagccgctgaagccc
agtgaggaggaggaggctgaggatgaggaggccgtgctgcagcgccccctggagatcagc
ctgaagcacagcagcgtcgccgcggtggacggctcgtcctgtcccctggttcgtcctcag
ctcggcgtcgccgcgctgcacgaatacgccgagtggatcacagagctgaaggagaagcag
ggagacgccgaccctgttctgtgttactgggccgaggtctggacgctgtgtgaggccctg
tggggaaagctgggccccccggaccaggacccggacgccgagacgcccagcgactacgag
cagcagctggagcggaggcggacgttttcggcctggctgtcccgaggcgccgccagccgg
gtggaggaggaggtggccctggcggcgaaggggcgacacaccgacgccatcttcagttac
ctgacgggaaactgtatcagcgaagcgtgtcgtctggctcagaaggaaggagaccaccgt
ctgtccctgctgctgtcccaggccacggggtcccagttctcccgggacctgctgggcctg
cagctcgccgactggaaccgcatgcagaccgactgcttcctgtccgaggagcggctccgc
atcttcgcgctgctcgccgggaagcccgtgtggcagtcgtcggactcggtggtgaacgtc
tgctccgagctggactggaagcgctgcgtggccgtccacctctggttcatgctgccgccc
accgcctccgtggccgacgccctcggcaagtacgaggacgccttccagggctcctgtgag
ggggggaaatacgccgtcgcccccctgcctccgtacctggaggaggagcagccggacctg
gaggaggaggaggaggaggaggagcccaagcggccgctgtatgacctctgcttccacctg
ctcaagctctacagcgacagacactacagcctgcagcagctgctggaccctctgaccgtg
acctgggggcgtctggactaccggctcagctggcacctgtgggacgtcctgcaggcgctg
cactacagccacctgagcgcctcgcgccaggggctggtccacagcagctacgccgctcag
ctggagagcgccggcctctggcacatggccgtgttcatcctgctgcacatccccgaccac
actctgcgggaacgagccgtgagggagatgctggcgctgcactgccccctgcaggagacg
gaggagtcggtccggaggcagcgcttcctgaccgagcggctcctgatcccggagcagtgg
atccacgaggccaaagccacccgggccctgcgccacgccgacagaccccagcaggccctg
cacctgtaccgggccgggtactggaaccagtgccaccggctcctgatccagcacctggcc
tcagactgcatcatcaacgacaaccacgactacctgctggagttcctggaggggctggcg
gtccctgaacacagcgccaccatccaggactgggacacggcggggcgggtctacctggac
tacatccgggtcctcaagtctctgcaggacatccagcaggcggagaacgccggctaccag
ctggagcgtctctacaccgacgtcacgtctctgtgcagccggatcgagctcctgccctgc
agcaccgccagagaccggctggcccagtcagaaatggcgaagcgtgtcgctaacatcctg
cgggtggtgctgaggctgcaacagggcgacgcagcgtccgactccgccgccgttcctctc
gctcggctggcgccgcacatcagccgcctcccgatgccggaggactacaccctggaggag
ctgagaggcctcacgcagtcgtacctgcgccagctcatcgtcagccaatga
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