Mugil cephalus (flathead mullet): 125021741
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Entry
125021741 CDS
T08342
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125021741 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125021741 (taf6)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125021741 (taf6)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125021741 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
125021741 (taf6)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125021741 (taf6)
STAGA complex
125021741 (taf6)
TFTC complex
125021741 (taf6)
SAGA complex
125021741 (taf6)
SLIK complex
125021741 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
CBFD_NFYB_HMF
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
125021741
NCBI-ProteinID:
XP_047463861
LinkDB
All DBs
Position
15:2644401..2650969
Genome browser
AA seq
638 aa
AA seq
DB search
MAEERRQKQCSVSLPTESMKAMAESVGVGQLQEESCVALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPSIPENPPPAPKEQQKAESTEPLKVVKPGQEEDGSIRG
KGQSATTPDGKGKEKGLIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAV
VTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDDKT
QWTTRYGCIAGLAELGPDVIKTLILPRLTVEGARIKAVTEGPVVSNIDKIGADHVQSLLL
KHCASVIAKIRPQPDIVEQYRTDYGYLGPMLCSHVMKARTQAALQAQQVNRTTLTITQPR
PTLSVSQSGLSGSTGPRTPSIIKVPSSLTLMSPRPGTPSQPSPPATKYIVMATSAGAAST
QQVITLSSSQSASPVTSTVPSATSTLQPLVKLESGSGPGLTASRPLQKYIVVSLPSSASS
SLESKGSVLPTSISSTPLDAGMKLERSESPGVTTNSPN
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaacgtcggcagaagcagtgttcagtcagcctgcccacagagtcaatgaag
gccatggcagagtctgtgggagtggggcagttacaagaggaaagctgtgtagctctaagt
gaagaagtcagctacagaataaaagaaattgcacaggatgctctgaaattcatgcatcat
gggaagagacgtaaattaaccaccagtgacatagataatgctctgaaattaaaaaatgtg
gagcccctgtatgggttccagtcacaagagtttatcccttttcgctttgcgagtggtggt
ggaagagagcttcatttctatgaggaaaaggaagtcgacctcagtgatattattaacaca
ccactccccagagtaccgctagatgtgtctctcaaagctcactggttaagtattgaaggg
gtgcagccgtctattccagaaaatccaccaccagcaccaaaagagcagcaaaaggcagaa
tccacagaacccctcaaagttgtcaaacctggtcaggaggaggatggttctattcgaggc
aagggtcagagtgcaacaactccagatggcaaaggaaaagaaaagggtctaattaggttg
aaaccacgcagcacccatgagctgtctgtagaacagcaactatactacaaggagatcaca
gaagcgtgcgttggctcctgtgaagctaagagagcagaggctttgcagagtattgctact
gatccaggactgtaccagatgcttccaagattcagcacattcatttctgagggggttcgt
gtgaatgtggtgcaaaacaatttggctctactgatttatctaatgcggatggtcaaagct
ctgatggacaatcccaccctttacttggagaaatacttgcatgagctcatcccagctgtg
gtcacctgtatagtaagtaagcagctctgcttacgcccagacgttgacaaccactgggct
ttacgagactttgctgcacgccttatggctcagagttgtaaaaccttcagtactacaacc
aacaacatccagtcccgtatcaccaagacttttactaagagttggttggatgacaaaaca
cagtggacgacacgatacggctgcatcgcgggtcttgctgaactgggaccggatgtgatt
aagacgttgatccttcctcggcttactgtagagggtgctcgcatcaaagcagtgacggaa
ggacccgtggtctccaatattgataagataggagctgaccatgttcagagcctcttactg
aaacattgtgccagtgttattgccaagatacgacctcagcctgacattgtggagcagtat
cggacagattatggttaccttggacccatgctctgctcccatgtgatgaaggcaaggact
caagcagcactgcaagctcagcaagtcaacagaaccacattaacaatcacgcagcctcgt
cccacgctctcagtttcacaaagtgggttaagtgggtcgacagggcctcgcactcccagt
atcattaaggttccgagctccctcacactgatgtccccccggcctggtaccccatcacag
ccatctccacccgcaacaaagtatattgttatggcaaccagcgcgggagcggcctcaact
cagcaggtaatcactctcagctcctcccagtccgcttcaccagtaactagcaccgttccc
agcgctacctccaccttgcagccattggtgaagctggagtctggcagtgggcctggactg
acggcttcacgacctctacagaagtacatagttgtatctctgccctcatctgcctcttct
tctttggagtctaagggctctgtgcttcccacctcaatttcctcaactccactagatgca
ggcatgaagttggagcggtccgagtctccaggagtgaccacaaactcgccaaattga
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