Mugil cephalus (flathead mullet): 125021981
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Entry
125021981 CDS
T08342
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03420
Nucleotide excision repair
mcep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
125021981 (ercc4)
03460 Fanconi anemia pathway
125021981 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcep03032
]
125021981 (ercc4)
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125021981 (ercc4)
DNA replication proteins [BR:
mcep03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125021981 (ercc4)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125021981 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
125021981
NCBI-ProteinID:
XP_047464164
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All DBs
Position
16:complement(15970128..15976493)
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AA seq
896 aa
AA seq
DB search
MARPLLEFETEMFLSLFGCDGLLVVAEGMGIDRILLQFMRVYSEQGSLVLLLNTTAPEQE
YFTEQLRVEGVTHLPRTVTSDVQSTERYNVYTEGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKKL
YLWPRFQASVNTALDRHKPDVVELHVSLTPAMRAIQSSILDIMSACLKELKRYNPTLEAE
DLSLENTLGNAFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNLL
ESLRSSQKNFGSNSGWLFLDSSTSMFMNARSRVYRIPESKKKLKVGAEAEKQKISSASEV
KRELVLEKSPKWEALTEVLEEIEKENKSTQHEPGRVLICASDDRTCAQLQQYIRHGSDRL
LNRLYARTIGKRDASAAAAFELDSNKKGKDWVKRGAKGKEPAQKKKAAKGKSRPSLTLTQ
MVGKEETGEAAVTGSGDEDELAEDDDGEEEQLSLDLSSDDYYGVLKEPLTVIHPLKGCTD
PHSLTRVLHEVEPSFVVLYDAELSFVRQLEIYKANRPGKALRVYFLIYGGSTEEQKYLTG
LSKEKKAFEHLIREKATMVIPEEREGREDTNLDLARNLEPANATTNSRKAGGQDQPKEPS
RVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTPETCVERKSVSDLIGSLQSGRLY
TQCLSMTRYYRKPVLLIEFDPAKPFSLTARSDFRHEISSNDVSSKLTLLTLHFPRLRILW
CPSPHATAELFLELKQGRLEPDAAAAQAVTAESDTVAESADLYNPGPYDFLLKMPGVNTK
NYRALIKNADSIADLVKLSQDKLAEILGNSNNAKVLYEFLHNVADVPAPVQKTKPT
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcccgctactggagtttgagacagagatgtttctcagtctcttcggctgtgac
ggtttgctggtggtggctgagggaatgggaatagaccgcatcctgctgcagtttatgcgg
gtttactcggagcagggcagcctggtccttctgctcaacacaactgcacctgaacaggag
tatttcacagagcagttgcgtgtggagggtgtgacccaccttcccagaactgtgaccagc
gatgtccagagcactgagcgctataatgtttacactgagggaggggtgctgtttgtcacc
agcaggatcctggtggtggacttcctcactgaccgcatccctgctcatctcatatcaggt
atcctggtgtatcgcgcccataaaatcatcgagtcgtgccaggaggccttcatcctgcgt
ttgttcagacagaagaacaagacaggcttcattaaggctttcactgacaaggccacagct
ttctcctcaggattctgccaagtggagcgcgtgatgagaaacctttttgtcaagaagctt
tacctgtggcccaggtttcaagcatcagtgaacacagcactggacaggcacaagccagac
gttgtggagcttcatgtgtcgttgacgccagctatgagggccatccagagctccatcctg
gacatcatgagcgcctgcctgaaggagctgaagcgctacaaccccaccctagaggctgag
gacctgtcactggaaaacacgctaggaaatgcttttgaaaagactatccgccactacttg
gaccccctgtggcatcagttgggagcaaagacaaaggccctggttcaggacctcaaggtg
ctgagggtcctcctgctctacctcacccagtacgactgtgtcaccttcctcaatctgctt
gagtcactgcgttccagccagaagaactttggctccaattcaggttggctgttcttggac
tccagtacctccatgtttatgaatgccaggagcagagtgtaccgcattcctgaaagcaaa
aagaaactcaaagtgggagcagaagcagagaaacagaagatatcctctgcttcagaggtg
aagcgggagctggtgctggagaagagcccgaagtgggaggcactgaccgaggtgctggag
gagattgagaaggagaacaagagcactcaacatgaaccaggccgcgtgttgatttgtgcc
agcgacgaccggacatgtgcccagctgcagcagtacatccggcacggctccgaccggctg
ctcaaccggctgtacgcccgcacgatcggcaaacgggacgcttcggctgctgccgccttt
gagctggactcgaacaaaaagggaaaagactgggtcaagagaggagccaagggaaaggaa
cccgctcagaaaaaaaaggccgcaaagggcaaaagccggccatcgctcaccctgacgcag
atggtggggaaagaggagacgggtgaagcggccgtgacgggcagcggagacgaggacgag
ctggcggaggacgacgacggagaagaggaacagctcagtttagatttgtcatcagatgac
tattatggagtcctgaaggagccgctgaccgtcatccacccgcttaaaggctgcactgac
ccccacagcctgaccagggtgctgcacgaggtggagcccagctttgtggtgctgtatgat
gccgagctgagttttgtccgccagctcgagatctacaaagctaaccggcctggaaaggcg
ctcagggtgtatttcctcatctatggaggctccaccgaagaacagaagtacctcactgga
ctgtctaaagaaaagaaagcgtttgaacatctcatcagggaaaaggctactatggtcatc
ccagaggagagggaggggcgagaggacaccaacctcgacctcgctagaaatttagaacct
gcaaatgccaccaccaacagccgcaaagcaggaggtcaagatcagcccaaagagccctcg
cgagtcatcgtggacatgcgtgagttccgcagtgagttgccttccttgctccaccgccgc
gggctggacatcgagcccgtcaccctcgaagtcggcgactacatcctgaccccggaaacg
tgcgtcgagcgcaagagcgtcagcgacctgatcggctcgttgcagagcggccgcctctac
acgcagtgcctctccatgacccgctactacaggaaaccggtgctgctcatcgagtttgac
ccagccaaaccgttttccttaacggcccggtcagatttccgtcacgagatttcctcaaac
gacgtctcctcgaagctcaccttgctcacgttgcacttcccgcggcttcgtatactgtgg
tgcccctccccgcacgccacggccgagctcttcctggagctgaagcagggccggctcgag
cccgatgctgcagcagctcaggcggtcacggctgagtcggacacagtggctgaatctgca
gacctctacaacccaggaccctatgacttcctgttgaaaatgcccggggtcaatacgaaa
aactacagggctcttataaaaaacgcagacagcatcgcagacctcgtcaaactgagtcag
gacaagctcgcagaaatactcgggaatagtaacaatgccaaggtgctgtacgagtttctg
cacaacgttgctgatgttccagctcctgtacagaaaaccaaaccgacatga
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