Mugil cephalus (flathead mullet): 125022046
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Entry
125022046 CDS
T08342
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125022046 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcep03041
]
125022046 (dhx15)
03009 Ribosome biogenesis [BR:
mcep03009
]
125022046 (dhx15)
Enzymes [BR:
mcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125022046 (dhx15)
Spliceosome [BR:
mcep03041
]
Complex A
U2 snRNP components
U2 related factors
125022046 (dhx15)
Complex B
125022046 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
125022046 (dhx15)
Ribosome biogenesis [BR:
mcep03009
]
Eukaryotic type
90S particles
Helicases
125022046 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Flavi_DEAD
SRP54
nSTAND3
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
125022046
NCBI-ProteinID:
XP_047464287
EnsemblRapid:
ENSMGCG00000004439
LinkDB
All DBs
Position
1:41311348..41339086
Genome browser
AA seq
759 aa
AA seq
DB search
MSKRHRLDLGDDYSPGRKRSSDGRDRDRDERSRDRGRDRDRDRDVRPSSGMPGVPAAGGL
GFLKQPPMQQQQQQQQQQLNPFTSLPHTPRYYEILKKRLQLPVWEYKERFTDILRRNQSF
VLVGETGSGKTTQIPQWCVDMVRSVPGQRRAVACTQPRRVAAMSVAQRVADEMDVMLGQE
VGYSIRFEDCSSAKTVLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVL
KEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAAI
RTVIQIHMCEVDEGDVLLFLTGQEEIDEACKRIKREVDDLGPDVGDIKIIPLYSTLPPQQ
QQRIFEPPPPNKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESL
LVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKK
LGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI
ASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFKQ
NHESTQWSYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFSSRDYYVNIRRALATG
FFMQIAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDVKPE
WLVKIAPQYYEMSNFPQCEAKRQLERIIAKLSSKEYTQY
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcatcgtttagatttgggtgacgattattcgccagggagaaagaggtcc
tctgatgggcgcgacagagaccgcgatgaacgttcgagagacagaggccgagaccgcgac
agggaccgagatgtgaggccttcgtccgggatgcccggcgtcccagctgcaggcggcttg
ggcttccttaaacagccgcccatgcagcagcagcagcagcagcagcagcagcagctcaac
cctttcaccagcctgccccacacgcctcgctactatgagatcctcaagaagcggctgcag
ctgccggtctgggagtacaaggagaggttcaccgacatcctgaggcggaaccagtctttt
gtgctggtgggagagacgggctctggaaagaccacgcagatccctcagtggtgtgtggac
atggttcggtcagtgccggggcagcggagagcggtggcctgcacccagcccaggagggtg
gcggccatgagcgtcgcccagagggtcgctgacgagatggatgtcatgctgggccaagag
gtgggctactccatcaggtttgaggactgcagctctgccaagactgtgctcaagtacatg
acagatgggatgctgctgcgggaggccatgaacgaccccctgctggagcgctatggcgtc
atcattctggacgaggcccacgaacgcacattggctacagacatactcatgggagtcctt
aaggaggtggtccgccagaggtctgacctgaaggtcattgtcatgagtgcgacgctcgat
gccggtaaattccaggtgtacttcgacagctgcccgctcctaactatacccggacgcacg
caccccgtggagatattctacacgccggagccggagcgcgactacctggaggctgccatc
cgcactgtgatccagatccacatgtgcgaggtggacgagggggacgtgttgctcttcctc
accggacaagaggaaattgacgaggcctgcaagcggatcaagagggaggtcgacgatctg
gggccggacgtcggcgatatcaagatcatcccgctgtactccacgctgcccccgcagcag
cagcagaggatcttcgagccgcccccgcccaataaaccgaacggcgccatcggaaggaag
gtcgtcgtgtcaacaaacatcgccgagacgtccctgaccatcgatggcgtggtgtttgta
attgatccgggatttgccaagcaaaaggtttacaaccctcgtatccgagtggaatccctt
ttggttacagccatcagcaaagcctcggcccagcagagggcaggtcgagctggacgaaca
cgccccggaaaatgtttccgcctctacacggagaaagcgtataagaccgaaatgcaagac
aacacgtatccagaaatcctcaggtctaatctgggctccgtggtgctgcagctgaagaaa
ctgggcatcgatgacctggtgcactttgacttcatggacccgccagccccggagaccctg
atgcgagccctggagctgctgaactacctggcggcgctcaacgacgacggcgacctgacg
gagctgggctccatgatggcagagttccccctggacccccagctggccaagatggtcatc
gccagctgtgaattcaactgctccaacgagatcctctccatcaccgccatgttgtcagtc
ccgcagtgcttcgtccgacccacggaggccaagaaggcggctgacgagtccaagatgcgc
ttcgcccacatcgacggagaccacctgacgctgctcaacgtctaccacgccttcaagcaa
aaccacgagtccacccagtggagctacgacaactttgtcaactaccgctcgctgatgtcg
gccgacaacgttcggcagcagctgtccaggatcatggaccgtttcagcctgccgcggcgg
agcaccgagttcagcagcagagactactacgtcaacatccgccgagcgctggccacgggc
ttcttcatgcagatcgctcacctggagcgaacaggccattacctgacggtgaaggacaac
caagtcgtgcagctgcacccctccacggtgctggaccacaagcccgagtgggtgctctac
aacgagttcgtgctcaccaccaagaactacatccgcacgtgcacggacgtcaagccagag
tggctggtgaagattgccccgcagtactacgagatgagcaacttccctcagtgcgaggcg
aagagacagttggagcgcatcattgctaagctctcgtccaaggaatacactcagtactga
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