Mugil cephalus (flathead mullet): 125022225
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Entry
125022225 CDS
T08342
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b isoform X1
KO
K16498
protocadherin delta 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125022225 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcep01009
]
125022225 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcep04515
]
125022225 (pcdh7b)
Protein phosphatases and associated proteins [BR:
mcep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125022225 (pcdh7b)
Cell adhesion molecules [BR:
mcep04515
]
Cadherins
Protocadherins
125022225 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
LYRIC
Gp80
Adeno_E3_CR2
DUF1180
Motif
Other DBs
NCBI-GeneID:
125022225
NCBI-ProteinID:
XP_047464638
LinkDB
All DBs
Position
1:complement(45575146..45678029)
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AA seq
1253 aa
AA seq
DB search
MRTTGAVDYLYYCMLILQFVHQPAAKQVLRYRLAEEGPADVRVGNVATDLGIVAGSGEVT
FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGENSRRLGSAGDSYSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPENNAPGERVTTVAAIDADSGKNAEIAYS
LDSSVNGIFSIDADSGDVRVNTILDREQTERYEFKVIAKDKGINTLQGSATVVVLVSDKN
DNEPKFMQDVFTFYVKENLDPNSAVGMVTVIDADKGQNAQMGLFIEEEEEIFSIENETGT
IFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLL
PPSSNIRTVVRTVLATDTDTGINADLNYSIIGGNPFKLFEIDGATGVISLMAKLEQKHYG
LHRLVVQVNDSGQPSQSTTTLVHVYVNETLSNSTIVEAQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTIN
KYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPEDS
YERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPERRPSKS
TTIPQQPKLSTFMSGSGSSSTEQPGSQETLAMAAMANGDPTAAHMMGDRNRNLLNKKMAS
SSSSYEAFGSPSYGQPGGGDEALGHPTEEIPLAPTGEYKPTSCGTLTRREVYL
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggtgcagtggactatttgtactattgcatgctcatcctgcagtttgtg
catcagccagctgccaagcaagtgctccggtaccgtttagctgaggagggacccgccgat
gtcagagtagggaacgtagccaccgacctgggcatcgtcgccgggtccggtgaggtgacg
ttcactctcgagtcgggctcagattttttcaaaatcgacaacatcacaggtgagctcacc
accaacgagagacggatagaccgcgaaaaattacagcagtgccaaatgatatttgatgag
aatgagtgttttatagattttgaagtgtcggtgattggaccagcccagagctgggtcgac
ctctttgaaggaaaagtcatcatattagatataaacgataacactccgtctttcccttcc
cctgtcctgacactgtctgtggaggaaaacagacccattggaaccctttatctgctgccc
acagccacagacagagatttcggcagaaatggaattgagagatatgagcttattcaggac
aatggggagaactcacggcgcttggggtctgctggggattcatactcggggaagaggagg
tttgatgaaggagcgagcaggagcagtgtctttgaactgcaagttgctgacactactgat
ggagagaagcagcctcaactcatcattaaaggggcacttgatagggaacagagagactcc
tatgagctcacgctgcgcgttagggacggaggagatccccctcgctcctctcaggccatt
ctgagggtaatgatcactgacgtgaacgacaacagtccccggtttgagaagagtgtgtac
gaagccgacctaccagaaaacagctcccctggcgcccccatactgcagcttaaagcggct
gatgcagacgtgggggttaatggtcaaatagagtatgtgtttggggcagccacagagtca
gtgaggaggctgctgaggttggatgagagcacagggtggctgagtgtgctacaccgtatt
gaccgcgaagaagtgagccagctgaggtttacagtaatggcccgtgaccgaggccagccg
cccaaaatggacaaggccacagtggtgctaaacatcaaggacgagaacgataatgtccct
gctatagaaatacggaaaattggacgcattttcttaaaagacggggttgcaaacgtggcc
gaggatgtcgtggtggacacacccatcgccttagttcaggtgtctgaccgcgatcaagga
gaaaatggcatagtgacctgcacagttgtgggagacgtgccctttcagctcaaaccggcc
agtgagatggagggggagcagaataaaaagaaatatttcctccacacgtctgcaccactg
gactacgaggccacacaggaatacaacgtggtcatagtggcggtggactctggaagcccc
agcctggcaagtaataactctcttatcgtgaaagtgggcgacactaatgacaaccctcct
atcttcagccagaatgtagtagaggtgtcatttccagaaaacaatgcccctggcgagagg
gtgacaacagtggcagccattgacgcagatagtggcaagaatgctgaaatagcctattcc
ctagactcatcagtaaatgggattttctctatcgatgcagacagtggagacgtccgagta
aacaccattctggatagagagcaaacagagcgctacgaattcaaagtgatagccaaagat
aagggcataaacactcttcagggttctgcaacagtggtcgtccttgtgtccgataagaat
gacaatgaaccaaagttcatgcaggatgtattcaccttctatgtcaaagagaaccttgat
ccaaacagcgcagttggtatggttacggtcattgacgcagataaaggccaaaatgcgcag
atgggtcttttcatcgaggaagaggaggaaatcttctccatcgagaacgaaactgggaca
attttttccaccctctcctttgaccgagagcagaaaacgacgtacacattccgtgtcaaa
gctgtggacggaggcgaccctcccagatccgccactgccaccgtttcgcttttcgtcatg
gacgaaaatgacaacgctccaacagtcaccttcccaataaacagctcgtacaccctcctt
cccccctccagtaacattagaacggtggtccgaaccgtcctagccaccgacacagacacc
ggcatcaacgcagacctgaactacagcatcatcggaggaaaccccttcaagctgtttgag
atcgacggggccactggggtcatttcactaatggcaaagttggaacagaaacactacggc
ctccacagactggtggtccaggtgaacgacagtgggcagccttcgcagagcaccaccacc
ctggtccatgtttatgttaacgagacgctttccaactccacaattgtggaggcccaggtg
gccaagagccttagcacgtctctcaacaccaacattgccggcgaccccaactacgacctc
agcaaacagcgcctaagcatcgtcatcggagttgtctcgggcatcatgacagtaattctc
atcattcttgttgttgtcatggcccgttactgccgcccaaagaacaagaatggttacgag
gccggcaaaaaggatcacgaagatttcttcacaccacagcagcacgacaaatcaaagaag
cccaagaaagataagaagaagcagaagtccaaacagccgctctacagcagcattgtcacc
gtagaggcctccaaacccaacgggcagcgctacgacggcgtcaacgagaagctgtcggac
agtcccggcatgggccgataccgctcagtcaatggagggccggggagcccggatctggcc
cggcactacaagtccagctcgccgctccccactgtccagcttcacccgcagtcaccgaca
gctggaaaaaagcaccaggcagttcaggacctgccccctgccaatacctttgttggcacc
ggagataacatttcccttggatctgaccactgctctgaatacagcagtcaaaccatcaac
aagtacaacaaacagccgtttcgccgagtgaccttctcggtggtgagccagccccaggac
cctcaccagcagggatcgctgcagagctgctacgacagcggcctggatgagtcggagaca
cccagcagcaagagttcatcgggcccccggctgggcgcccttcccctgcccgaggacagc
tacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgactcc
cggcccttgcctgacgtagccatgactggcaagtgcacccgggaatgcgacgagtacggc
cactcggactcctgctggatgcctgtgcgcacgtcgcccgagcgacggccatccaagtca
accaccatccctcaacaaccaaagctttccactttcatgagcggcagcggcagcagcagc
accgagcagcccggcagccaagagaccctcgccatggccgccatggccaacggagacccc
accgctgctcacatgatgggcgaccgcaatcgcaacctgctcaacaagaagatggcctcc
tcctcttcctcctatgaggcctttggctcgccctcctacggccagccagggggcggggat
gaggcactgggccaccccaccgaggagattccccttgcgccgactggggagtacaagccc
acatcctgcggtaccctgacacgacgggaggtgtacctgtga
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