Mugil cephalus (flathead mullet): 125022322
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Entry
125022322 CDS
T08342
Name
(RefSeq) thrombospondin-2-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04145
Phagosome
mcep04510
Focal adhesion
mcep04512
ECM-receptor interaction
mcep04518
Integrin signaling
mcep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125022322
04518 Integrin signaling
125022322
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125022322
09144 Cellular community - eukaryotes
04510 Focal adhesion
125022322
09142 Cell motility
04820 Cytoskeleton in muscle cells
125022322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125022322
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcep04147
]
125022322
00536 Glycosaminoglycan binding proteins [BR:
mcep00536
]
125022322
Membrane trafficking [BR:
mcep04131
]
Endocytosis
Phagocytosis
Opsonins
125022322
Exosome [BR:
mcep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125022322
Exosomal proteins of colorectal cancer cells
125022322
Exosomal proteins of bladder cancer cells
125022322
Glycosaminoglycan binding proteins [BR:
mcep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125022322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
VWC2L_2nd
EGF_3
TSP1_CFP_C
TSP1_ADAMTS
TSP1_CCN
EGF
Motif
Other DBs
NCBI-GeneID:
125022322
NCBI-ProteinID:
XP_047464831
LinkDB
All DBs
Position
16:complement(8032396..8046904)
Genome browser
AA seq
1206 aa
AA seq
DB search
MSPLRGFPWLLTCLYAAALVCAGVGGAKVSNVSAEVCHHPCDELMDLITEIHGLRIVTTN
LLEDLERVTRENEEMRISLDELSNSGRRRGGSGGRGSGGGGSGSSGGSGGGGGSGSGGSG
GGSGRGSNGGGGSGSGSGGGGGSGSGGSGGSGDGSGSGGRGGSGSGGSGDGSGSGGRGGS
GSGGSGDGSGSGGRGGSGSGGSGDGSGSGGRGGSDSSGGGGGGGGSDGGGRGGGGGGGGG
PGGSGHAGDGPGGTGRDGGGPGASDHGGDGPGGSAHGGDGPGGSAHGGDGPGGSGHGSDG
PGGSWRYGGGPGGSGRYGGGPGGRGHGGGGRGGSGNDIDIDFDFDFDFDRNGELWCMQDG
RVYKQGDDWDFDSCTSCACQDGKVVCHQVLCPPVSCINPSFIDGECCPVCLKNKDGWSPW
SEWTHCSVSCGRGGQQRGRSCNGIATSCIGPSLQTRSCTMTKCIRKARADGNWGLWSPWS
ACTTTCGDGSITRVRLCNNPPPQKGGKGCAGSARETQPCNNTLCPIAGGWTAWSEWSACS
ESCGGGLISRQRECTNPAPQNGGRMCVGDAVDYEACNKQPCPIDMCLLSNPCFPGVECTS
HSDGSWECGRCPLGLEGNGTHCEDLNECEVEEVCVTECVNTDPGFYCLPCPPRYKGTQPY
GLGLQAALTNRQVCEPYNPCKDNTHTCHKYAECIYLGLASEALFKCMCAVGFAGDGFLCA
DDSDLDGWPNYKLTCKKNATYHCQKDNCPLVPNSGQEDFDKDGLGDACDPDDDNDEIIDE
RDNCPLVYNPRQFDSDRDGIGDRCDNCPFDSNPLQTDTDDNGEGDACSIDMDGDEVLNER
DNCPLVYNTDQRDTDMDGVGDQCDNCPLLHNPLQMDSDSDLVGDMCDDNEDIDEDGHQNS
LDNCPYIPNSNQADHDDDGKGDACDHDDDNDGIPDDRDNCRLVPNSDQLDSDGDGSGDAC
FDDFDNDSIPDALDPCPLNQDIGSTDFRKFQVVLLDPKGTTQSDPLWVIRSQGRELLQAA
NSDPGIALGYDKFNAVDFSVTFYVNTNRDDDYAGIVFGYQSSRRFYVVMWKQVSQAYWEK
KPSKAFGTAGVSIKLVNSSTGPGEYLRNALWHTGNTRHQVRTLWHDPNKIGWKDYTAYRM
HLIHRPKTGFIRVVVHEGREILADSGAVYDHTLAGGRLGLFVFSQEHVLFSDLRYECRGK
ISSQNI
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccctgagagggttcccctggcttttgacatgcctgtatgcagcagcgttagtg
tgcgcaggtgtgggtggggcaaaggtcagcaatgtttcagcggaggtttgccaccacccg
tgcgatgagctgatggacttgatcaccgagatccacggcctgcggattgtaaccaccaac
ttgctcgaagacctggagagagtaacgagagaaaatgaagagatgcggatatctttggac
gagctgagcaacagcggcagaagaagaggcggaagcggaggcagaggcagcggtggaggt
ggcagtggcagcagtggtggcagcggtggtggaggtggcagtggcagcggtggcagcggt
ggtggaagtggccgtggcagcaatggaggaggcggcagtggcagtggcagtggtggagga
ggcggcagtggcagtggtggcagcggtggcagcggtgatggaagtggcagcggtggacga
ggtggcagtggcagtggtggcagcggtgatggaagtggcagtggtggacgaggtggcagt
ggcagtggtggcagcggtgatggaagtggcagcggtggacgaggtggcagtggcagtggt
ggcagcggtgatggaagtggcagcggtggtcgaggtggcagtgacagcagtggtggtggt
ggaggtggaggtggcagcgacggtggaggtcgtggtggtggcggtggcggtggcggtggt
cctggtggcagtggtcatgccggcgatggtcctggtggcactggtcgtgacggcggaggt
cctggtgccagtgatcatggcggcgatggtcctggtggcagtgctcatggcggcgatggt
cctggtggcagtgctcatggcggcgatggtcctggtggcagtggtcatggcagcgatggt
cctggtggcagctggcgttacggcggtggtcctggtggcagtgggcgttacggcggtggt
cctggtggcagaggtcatggcggtggtggtcgtggcggcagcggcaacgacattgacatt
gactttgactttgactttgacttcgacagaaatggggagctgtggtgcatgcaggatgga
cgcgtgtacaagcaaggggacgactgggatttcgacagctgcacctcctgcgcttgccag
gatggaaaggtagtgtgtcatcaggtgttgtgtccccctgtgtcctgcatcaatccgtcc
ttcatcgatggagaatgctgccctgtgtgtctaaagaacaaagacggctggtccccgtgg
tctgagtggacccactgctcggtgtcctgtggacgtggagggcagcaacggggccgatct
tgcaacggcatcgcaacgtcctgcatcggcccatcgctccagacccgaagctgcacgatg
actaagtgcattcgcaaggcgcgtgctgatgggaattggggactttggtctccctggtcc
gcatgtacaaccacgtgcggtgacggcagcatcacgcgggtccgtctgtgcaacaaccct
ccgccacagaagggcggtaaagggtgcgccggcagcgccagggagactcaaccttgcaat
aacacgctctgtccgattgctggaggctggacggcctggagcgaatggtccgcctgctcg
gagtcatgtggcggaggccttatcagtcgtcagcgagagtgcacgaaccctgctcctcag
aacggggggagaatgtgcgttggagatgctgtcgactatgaagcatgtaacaaacaacca
tgtcctatagacatgtgcttgctctcaaatccgtgttttcctggggtggaatgcacatca
cacagtgatggatcgtgggaatgtggacgctgtccgttgggtttagagggcaacggcact
cattgtgaagatctgaacgagtgtgaagtggaggaagtgtgtgtcacagagtgcgtaaac
acagaccctggattctactgtcttccctgtcctcctcgctataaaggcacccagccttac
ggcctcggactgcaggcagccctgacaaacaggcaggtttgtgaaccgtataatccttgc
aaagacaacacacacacctgccacaagtatgccgagtgcatttacctcggcctggcgtct
gaggccttgttcaagtgcatgtgtgctgtcgggtttgctggcgatggcttcctgtgtgct
gatgactccgatctggacggctggcccaactacaaattaacctgcaagaagaatgcaacc
tatcactgtcaaaaggacaattgccccttggtgccaaattctggacaggaagacttcgac
aaggacggactaggagacgcctgcgaccccgatgatgacaatgatgaaattatagatgag
agggacaactgcccgctggtgtacaaccctcggcagtttgactctgacagggacgggatt
ggagaccgctgtgacaactgcccttttgatagcaaccccctgcagacagacaccgatgac
aatggagagggagacgcctgcagcatcgacatggacggagatgaggttctgaatgaacgc
gacaactgtcctttagtctacaacaccgatcagagggacacagacatggatggtgttggt
gaccagtgtgacaactgtccccttctacacaaccccctgcagatggactccgacagcgac
ctggtgggggacatgtgtgacgacaacgaggacatcgacgaggacggccaccaaaactct
ctagacaactgtccctacatccctaatagcaaccaggccgaccatgacgatgacggaaaa
ggagatgcatgcgaccatgacgatgacaatgacggtatccctgacgaccgggacaactgc
agactggtgcccaacagcgaccagctggactctgatggtgatggcagtggggatgcatgc
tttgatgactttgacaacgacagtattccagatgcgctggatccctgtccactaaaccag
gatatcgggtcaacagacttcaggaagtttcaggttgttttgttggaccctaaaggcacc
acacagtctgaccctctctgggtgatccggagtcagggtagagaactgctacaggctgca
aactcagaccctgggatcgccttaggatatgacaagttcaacgcagtggacttcagcgtg
acgttttatgtgaataccaaccgagatgacgactatgcgggcattgtgttcggctatcag
tccagccgacgcttctatgtggtcatgtggaaacaggtgtctcaagcctactgggagaag
aagccatccaaagcttttggcaccgctggagtctccatcaaactggtcaactccagcaca
ggaccaggggagtatctccgcaatgctctgtggcacactggaaacaccagacaccaggtc
agaacattgtggcatgaccccaacaaaattggctggaaggactacacagcgtaccgcatg
cacctcatccatcgacccaagaccggattcatcagggtggtggtgcatgagggcagggag
atcttggcggactctggggccgtgtacgaccacaccctggctggaggtcgactgggacta
tttgtcttctctcaggaacacgttctattctcggacctcagatatgagtgcagaggtaag
atatccagccaaaatatttag
DBGET
integrated database retrieval system
