Mugil cephalus (flathead mullet): 125022475
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Entry
125022475 CDS
T08342
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03430
Mismatch repair
mcep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125022475 (pms2)
03460 Fanconi anemia pathway
125022475 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125022475 (pms2)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
125022475 (pms2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
125022475
NCBI-ProteinID:
XP_047465112
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Position
16:complement(17336580..17342040)
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AA seq
858 aa
AA seq
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MSDACTSEPAVAIRAIDKHSVHQICSGQVVLTLATAVKELVENSIDAGATNVDVKLKECG
AEQLEVSDNGKGVEEANFEGLTLKHHTSKIRDFSDLIHVETFGFRGEALSSLCALSDLSV
ITCHESSQVGTKLVFDHKGHLVQKVPHPRQQGTTVSLQQLFYTLPVRHKEFQRNIKKEYA
KMMHVLQSYCIISTGVRITCSNQNGQGKRSTVLSTSGSQCMRDNIGAIFGPKQLQSLLSF
QQISPTENIIDEYGLKVADLPKQLFTITGFVSRGDHGVGRSSTDRQFFFINNRPCDPLKV
TKLVNEVYHMYNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKLLLAVLKTSLITM
YEAGVNKISLNYTPTASTNAASSERVILSNEIKPDPGEDVQTVTPKTSINLSGLKAAFSN
HNSSNFGNKSSMGKASSCGPSQKTLQSFFKGSVKPSACSPSVKSPLKSTREPAKGGRSVL
DGFRYGRMSCSDADSEKNSNGSSCDLTVATPDGQCSGLEFNSPEAVIDVTSVKNETGEDA
SENVCTVSEDPELQAEAFTSNEVSAESPEAKRPRIETPHFPLEQISNAFSNSSEDSSPVV
DAPVHRQKRAMSLQFSLQELTEKIRRLQDRQKERDSMELCYRRFRAKINPGENQSAEEEL
KKEISKEMFKEMEIIGQFNLGFIITKLKTDIFMIDQHATDEKYNFEMLQQHTVLQGQKLI
VPQKLHLTAISENVLMENIEIFRKNGFEFLIDDEAQVMERVKLVSLPTSKNWTFGPADIE
ELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSVSEMKKLVVHMGEIEHPWNCP
HGRPTMRHLANLDIISQD
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcttgcacctctgagcctgctgtcgccatcagggctattgataaacactca
gtgcatcagatctgctcaggacaagtggtgctgaccttggccaccgctgtcaaagagctg
gtggagaacagcattgatgcaggagccacaaacgttgatgtcaagctgaaggagtgtgga
gccgaacagctggaggtgtcagacaatggcaaaggtgtagaggaggctaactttgaagga
ctgacactgaaacaccacacgtcaaagataagggatttctccgatctcattcacgtggaa
acatttggcttcagaggggaggccctaagctctttatgtgctctgagtgacctgagtgtg
ataacatgccatgagtccagccaggtgggcaccaagctggtgtttgaccacaaaggccac
ctagtgcagaaggtacctcatccccggcagcagggcaccacagtcagcctgcagcagctc
ttctacaccctacctgttagacacaaggagttccagcgcaatattaagaaggagtatgca
aaaatgatgcatgtgctgcagtcctactgtatcatctctacaggagtgcgtattacctgc
tccaaccagaacgggcagggaaagcgcagcacagtcctcagcaccagcggcagtcagtgt
atgagagacaacattggggccatatttggaccaaagcagctacagagtcttctttctttc
cagcaaatatctcctacagagaatatcatagatgaatacggactcaaggtagcagatcta
cccaaacagctttttaccatcacagggtttgtgtctcggggtgaccatggcgttggaaga
agctcgacagacaggcagttcttttttattaacaatcgaccgtgtgaccccctaaaggta
accaagcttgtgaatgaagtttatcacatgtacaacagacatcagtatccatttgttgcc
ttgaacatagctgttgcctcagagtgtgtggatgtgaacgtaaccccagacaaacggcag
attttcctacaggaggagaaactcctgctggctgttctaaagacctctcttatcactatg
tatgaggctggcgtaaataagatcagcttgaactatacacctacagccagcaccaatgca
gcatcttctgaaagagtcattttgtctaatgagatcaagccagaccccggagaggacgtc
caaacagttactccaaagacatctataaacctgtctggcctgaaagctgctttttcaaat
cataacagctccaattttgggaacaagtcaagtatgggcaaagcatccagctgtggccca
tcacaaaagactctgcagtctttttttaagggttctgtcaaaccttcagcatgcagccca
agtgtaaaatctcctttgaagtcaactagagaaccagctaaagggggaagatctgtgtta
gatgggtttaggtatggaaggatgtcttgcagtgatgctgattctgaaaagaacagcaat
ggatccagctgcgatctcactgtggcaacaccggatggtcagtgttctggactggagttc
aactctcctgaagcggtgattgacgtaacgagtgtgaaaaatgaaacaggtgaagatgca
tcagaaaatgtttgcactgtttctgaagacccggagttacaagctgaagcgttcacttct
aatgaggtctctgctgaaagcccagaggctaagagacccaggatagagactccacatttc
cccttggaacaaatatccaacgctttttcaaacagttcggaggattcttctcctgtggtg
gatgccccagtccaccgacagaagagggcgatgtccctccagttctctttgcaagagctg
acggagaagattagaaggttgcaagataggcagaaagagagggatagcatggagctatgc
taccgacgcttcagagccaagatcaaccctggagaaaaccaaagtgcagaggaagagctc
aagaaagaaatcagtaaagaaatgtttaaggaaatggagatcatcggtcagtttaacctg
ggcttcattatcaccaaactcaagacggacatcttcatgattgatcaacatgccacggat
gagaaatacaactttgagatgctgcagcagcacaccgtgctccaaggacagaaactcatt
gtcccacagaaactccacctcactgctatcagtgagaatgtactgatggagaacattgag
attttcagaaagaatggctttgagtttctaattgatgatgaagctcaggtgatggagaga
gttaagctagtatcacttcccaccagtaagaactggacatttgggccggctgacattgaa
gagctgatcttcatgttgagtgacagcccgggggtcatgtgccgaccgtccagggtgagg
cagatgtttgcctccagagcttgccggaagtctgtgatgattggcactgctctgagcgtc
agtgagatgaagaagctcgtggttcacatgggggaaatcgagcatccgtggaactgtcct
cacggcaggcccaccatgagacacctcgccaacctggacatcatctcacaggactga
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