Mugil cephalus (flathead mullet): 125022604
Help
Entry
125022604 CDS
T08342
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcep04121
]
125022604 (rnf40)
Enzymes [BR:
mcep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125022604 (rnf40)
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
125022604 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
ADIP
Rab11-FIP3
zf-RING_2
zf-RING_5
OVT1
SpoIIE
Motif
Other DBs
NCBI-GeneID:
125022604
NCBI-ProteinID:
XP_047465344
LinkDB
All DBs
Position
16:complement(18399793..18411785)
Genome browser
AA seq
1005 aa
AA seq
DB search
MSGTGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVIQFKNKK
LCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEDNVRVLRKRIEPEAPA
ASAPAPPPAPLPDPTPMEEDGISLASPTSAVPPPPLPEAQSEGEPSELQQHQEDRQEERQ
EDQQQPPPPAGSEDLMTPTEPTTYSKTDAVMPPPPLSENAKGFLTTLEQSSEEELTLHLE
DRMQFSKEAIACLVCVFDRLHSRINDMCKVVEAADCEDDTQSEIINVNHTLLEENSRLRD
LATLLQGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKLRNREQKLNKHLAE
AMEQLKSGYSSTGSSGGLPGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQVELQE
AVRESEKLKMDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNA
HLRQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINRE
MRHLISSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTGVLILEETTSDSIDVKK
EDDEDQEEEEERRKELERQRAREREREREAERERERERERERQRSDELKRKDSDTLKMLR
VELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERK
ESKKLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLL
QQLREKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEG
VLQSTLAALEKELAVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRT
ARERESSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNMRDK
ETVLTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcactgggggaggaaagcgtccctcaggaggggacagcccccctggcccgcct
gagaagaaaagcaaaaaagaggagaagaccaccaccacactaattgaaccaattcgcata
gccggagtctcttctacggaggaaatggacatgaaggtgatccagttcaagaataagaag
ttatgtgagcgcttggaacagagacaggcgatggaggatgagttacgagaaaaaattgaa
aaactggagaagagacaagccactgatgacaccaccttgctgattgtcaatcgctactgg
tcacagttggaagataatgtacgtgttctacgtaagcgtatcgagccagaagctcctgca
gcatctgcccctgccccaccaccagcaccactccctgaccccacacccatggaggaggat
ggtatcagcctagcttcgccaacatctgctgttcctccaccgcctttaccggaggctcag
agcgagggtgagccatcagaactacagcagcatcaggaggaccgtcaggaagaacgtcag
gaggaccagcagcaaccccctcctcctgctggctcagaagatttaatgacaccaacagag
ccaacaacgtattcaaaaacagatgcagtgatgcctcctcctcccttaagtgaaaatgcc
aagggtttcttgaccacgctggagcagagcagtgaggaggaactaaccctgcacctcgag
gaccgcatgcagttcagcaaagaagccattgcctgcttggtctgtgtttttgacaggctt
cacagtcgcatcaatgacatgtgcaaggtggtcgaggctgcagattgtgaggatgatact
cagtctgaaataatcaatgtgaaccacactctgctggaggagaacagtcggctacgagac
ctcgccactctcctgcagggtcgacaccacaagatgtctatggagtacaatgaattggtg
gacaaggtgacgagctcagagaccaaggtgtctgagatggagacaacggtggaagacctg
cagtgggacattgagaaactccgcaatagggaacaaaagctcaacaagcatctagcagag
gcaatggagcagctaaaatcgggatacagcagcactggaagctcaggggggctacctgga
ggtcagattacactgaacattcagaagtttgagagtctcaatgcggagttggagcacaac
caggagttggctaatagccgcatggcagagttggagaagctccaggtggagctccaggag
gctgtgagggagagtgagaagctcaagatggacttgcgcaatattccagaagaggttgtg
aaggaaaccttagagtacaaatgtctgcagtctcagttctccctgctgtacaacgagtct
ctcggggtgaaaactcagctggacgaggcacgggcgctactgctcactgcgaagaacgcc
catctccgacagattgagcacatggagagcgatgagctgtcccttcagaagaagctgcgg
actgaggtcatccagctggaggatactctggcccaggtgcgcaaagagtacgagatgctg
cgcattgagtttgagcagaacctggcagccaatgagcaagcaggaccaatcaacagagaa
atgagacatttaatcagcagccttcaaaaccacaacctgcagttgaaaggtgacgtgcag
cgctacaaaaggaagttgcgggaaacacaaatggagatcaataagttgcgctgccagagc
ggcgacacgggggttctgatcctggaggaaacgacgagcgacagcatcgatgtgaaaaag
gaggacgatgaagaccaggaggaagaggaggagaggaggaaagagctggagaggcaacga
gcccgggagagggagcgggagagggaggccgagcgtgaacgagagagggagcgcgagagg
gagaggcagcgcagcgacgagctgaagaggaaggactcggacacactgaagatgctccga
gtagaactcaagaaagcccaagagtcacagaaagagatgaagctcctgttggacatgtat
aagtcggctccgaaagagcaaagagacaaagtgcaactcatggcagccgagcgcaaatct
aaagccgaggtggacgagttgaggatgcgcgtgcgagagctggaggagagggagaggaag
gagagcaagaagctggctgatgaagatgccctcaggaagatacgagtggcagaagagacc
attgagcatctgcagaagaaactcgctgccactaagcaggaggaggaagccctgctgagt
gagatggatgtaacaggccaggcctttgaagacatgcaggagcagaacagccggctgttg
cagcagctacgggagaaggacgacgccaacttcaagctgatgagcgagcggatcaaatcc
aaccagatctacaagctgctgaaagaggagaaggaggagctggccgaccaagtccttacg
ttcaaaacccaggtggatgcccaactgctcgtcgtgcaaaagctagaagaaaaagaggga
gtgctgcagagcacattggctgctctggaaaaggagctggctgtcaggacacaagcacta
gagctcaacaagaggaaggcggtggaggctgcgcagctggcagaggacctgaaggtgcag
ctggagcacacgcaggccaagctgaaggagatccaggtctccgtggccgagaaccgcacc
gcccgggagagggagagcagcaatctgaaacgagcacaggaggatctgtccaggctgaga
cgaaagctggagaaacagaagaaggtggaggtgtactccgatgcagacgagatcctacag
gaggagatcaaccagtacaaggccaaactgcgttgcccctgctgcaacatgcgagacaag
gagacggtgctcaccaagtgcttccacgtcttctgctacgaatgtctgaagatgcgctac
gacacccgacagaggaagtgccccaagtgcaactgtgccttcggagccaacgactttcac
cgcatctacatcacttaa
DBGET
integrated database retrieval system
