Mugil cephalus (flathead mullet): 125022921
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Entry
125022921 CDS
T08342
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125022921 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125022921 (smarcd2)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125022921 (smarcd2)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125022921 (smarcd2)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125022921 (smarcd2)
PBAF complex
125022921 (smarcd2)
GBAF(ncBAF) complex
125022921 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Androgen_recep
TFIIA
LCD1
Motif
Other DBs
NCBI-GeneID:
125022921
NCBI-ProteinID:
XP_047465878
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All DBs
Position
16:2771165..2783024
Genome browser
AA seq
517 aa
AA seq
DB search
MASRGGGFTAPPMNPNMSPMNAGLPAGLRMPGVPQPPGGYPRSMSSVPHYPQRSGMPSSR
VGGPMGSMVGQLPGPSYGGGNIAMRPGMGPPGMDASRKRFLHQQQQHHHHQQQQQQQQQQ
QQQEALGSLRRGAKRRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQE
AIKKPIMQKRKLRIYISNTYTPSKPEGEEAEKVSSWELRVEGKLLEEPGKQKRKFSSFFK
SLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLD
PRLARLLGVHTQTRASIMQALWLYIKNNKLQDSHEKEFINCNRYFRQIFGCPRMRFSDIP
MKLAGLLQHPDPIIINHMISVDPTDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIA
ALEMKIHETIEYINQLKTERDFMLSFSNNPQDFIQDWLKSQCRDLKLMTDVTGNPEEERR
TEFYQEPWVPEAVGRYVYSKVQQRRQELEQVLGIRLT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgagaggaggaggcttcacggctcctccgatgaatcccaacatgagccccatg
aacgccggactccctgcgggcttgaggatgccaggagtcccgcagcctccgggcggatac
ccccgcagcatgagcagcgtcccccactacccccagcgttcggggatgccgtccagcagg
gtggggggccccatggggtcgatggtggggcagctaccaggcccctcgtatgggggtggt
aacatcgccatgaggccagggatgggtcctccgggcatggacgcgtcaaggaagcgtttt
cttcaccagcagcaacagcatcatcatcatcaacaacagcagcagcagcagcagcagcaa
caacaacaagaggctctgggaagtctcagacggggggcaaaaagacgcaagatggccgac
aaagttctgccgcagaggatccgagacctggtcccggagtcccaggcctacatggacctg
ctggccttcgagaggaagctggaccagaccatcgcacgcaagcgcatggagattcaggag
gccatcaagaagcccatcatgcaaaagcgcaaactgaggatctacatctccaacacctac
acgcccagtaaacctgagggcgaggaggccgagaaggtgtcgtcctgggagctgagagtg
gaaggcaaacttctggaggagcctggcaagcagaagaggaagttctcgtctttcttcaaa
agcctggtgattgagctggacaaggagctgtatggtcctgacaatcacttagtagagtgg
cacaggatgccgaccactcaggagacggacggtttccaggtcaaaagacccggagacgtg
aacgttaaatgcaccctcctgctcatgctcgaccaccagccgccccagtacaagctggac
cctcgtctggctcgtctcctcggcgtccacacgcagacacgggccagcatcatgcaggct
ctctggctctacatcaagaacaacaagctgcaggacagtcacgagaaggagttcatcaac
tgcaaccgctacttcagacagatctttggttgtccacgcatgagattctctgacatcccc
atgaaactggccggtctgctgcagcacccagaccccatcatcatcaatcacatgattagc
gtggaccccacggaccagaagaagacggcgtgctacgacatcgacgtggaggtggacgac
cctctgaagggccagatgaacagcttcctgtcctccaccaccaaccagcaggagatcgct
gcgctggagatgaagattcatgaaacgatcgagtacattaaccagctgaagactgagaga
gacttcatgctgagcttcagcaacaacccacaggacttcatccaggactggctgaagtct
cagtgcagagacctgaagctgatgacggatgtgacgggaaatcccgaggaggagcggagg
accgagttctaccaggagccctgggtcccggaggccgtgggccgatacgtttactccaag
gtgcagcagaggcgacaggagctggagcaggtgttgggcatccgcctcacctga
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