Mugil cephalus (flathead mullet): 125022971
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Entry
125022971 CDS
T08342
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03020
RNA polymerase
mcep04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125022971 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125022971 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125022971 (polr3a)
Enzymes [BR:
mcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125022971 (polr3a)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125022971 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
125022971
NCBI-ProteinID:
XP_047465944
LinkDB
All DBs
Position
16:6522410..6548432
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHSPLPYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKATIGILQMICKTCSSIMLTKE
EKLQFMDYLKRPNLAYLQKRGLKKKISDKCRKKTICLNCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDPFVSEFLQSFDIAIEHNKLVEPLLSRAQENLNPLVVLNLFKRIPQEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPDVHPGANF
IQNRHTQMKRFLKYGNREKIAQELRFGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDEKVKISLPHPAILKPMALWTGKQI
FSVILKPSQECPVKANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YRKCDEYIEALDTGKLQQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCQDQPALSQNELVLTADAIMKRADFLC
CRDSYLEELTDTGSEKYLEEIKKFIKSVSERIKKTRDKYGINDNGTSEPKVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIITAHLDSEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYV
LQSLKEELPKVVVQGIPEVARAVIHIDEQSGKNKYKLLVEGDNLRGVMATHGVNGSRTTS
NNTYEVEKTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
DPSPAKRPLLFDNTDFHIPLIT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacagatgtggcgaaaaaaataagccacatctgcttt
gggatgaaatctgctgagcagatgcgtcagcaggcccacattcaggtggtcagtaagaat
ctgtacagccaagacaccaaacacagcccactgccctatggagtgctggaccaccgcatg
ggcaccagtgagaaagaccgaccgtgtttgacatgtggaaagaatctggcggattgttta
ggacactacggctacctcgatctggagctgccgtgttttcacgtcggctatttcaaagcc
accatagggatcttgcagatgatctgcaagacgtgttcgagcataatgctgacaaaagag
gagaaactgcagttcatggattacttgaaacggcctaacctggcctacctccagaaacgg
gggttgaagaagaagatctctgataaatgccgcaaaaagacaatctgtctgaactgctcc
gctttcaacggacctgtgaaaaagtgtggcctgctcaagatcatccacgagaagtataaa
acaaccaagaaggtggtggatccttttgtctcggagttcttgcagtccttcgacatcgcc
atcgaacacaacaaactggtggagcctctactgagcagagcacaggaaaacctgaaccct
ctggtggtgctgaacttgttcaagaggattccccaagaggacatccctctgctgctgatg
aaccccgaggcagggaagccagctgaccttatcctcacacgcctcctggtgccccctctc
tgcatccgcccgtccgtggtcagcgacctgaagtcgggcaccaatgaggacgacctcacc
atgaagctgacggagataatcttcctcaatgatgtcatcaaaaagcatcgtatgacggga
gcgaagacccagatgattatggaggactgggacttcctccagttgcagtgtgccctttac
atcaatagcgaactttctggcatccctctaaacatggcgcctaaaaaatggaccagaggt
tttgtgcagagactcaagggaaagcaaggtcgattcagaggaaacctctccggaaaaaga
gtggacttctctggcagaactgtaatttctccagacccgaacctgaggatcgatgaggtg
gctgttcctgtgcacgtggccaaaatcctgacgtacccagaaagggtaaataaagccaat
ctggaactaatgaggaaactcgtccgcaacggccccgacgttcaccccggtgcaaacttt
atccagaaccgtcacactcagatgaaaagatttctgaaatatggaaaccgtgaaaagatt
gctcaggagctgaggttcggtgacgtggtggaaaggcacctgatagacggagacatcgtc
ctcttcaatcggcagccctctctgcacaaactcagcatcatggcccacatagccagagtc
aaacctcaccggacgtttcggttcaatgagtgcgtgtgcaccccgtacaacgccgacttc
gacggtgatgagatgaatctccatctacctcagactgaagaagccaaagctgaagccctg
gtgctgatggggaccaaagctaatcttgtcacgccgagaaacggcgaaccgctgattgct
gctattcaggactttctgacaggcgcttacctcttgactttgaaggacaccttctttgac
agatcaaaggcctgtcagatagtagcatccattcttgtgggcaaagatgaaaaagtcaaa
atctctctcccacacccggctatattgaagcccatggctctgtggacgggcaaacagatc
ttcagtgtgattctgaagccgagtcaagaatgtccagtcaaggcaaacctgcggaccaag
ggcaaacagtactgtggcaagggagaggatctctgccacaacgactcgttcgtggtgatt
cacaacagcgagctgatgtgtggtagcatggacaagggcaccttgggatccggctccaag
aataacatcttctacatcctgctgagagactggggacagctggaggctgccaacgccatg
tcccgcctggccagactcgctccagtctatctctccaacagaggtttctctattggaatt
ggtgacgtgacccccggccagggtctgttaaaggccaaacaggacctgctggatgacggc
tacaggaagtgcgacgaatacatcgaagccttggacacgggcaagctccagcagcagccc
ggctgcacggcggaggagactctggaggccctgatcttgagagaactgtccgtcatcaga
gacagagctggcagcgcttgtctcagggagctcgacaagagcaacagccctctgattatg
gctctttgtggctccaaagggtcctttattaatatctcccagatgattgcctgtgtgggc
cagcaggccataagtggctctcgagtgcctgatggttttgagaaccgctccctacctcac
tttgaaaaacactcaaaactgcccgctgctaaaggatttgtggccgacagcttctattct
ggtctgacacccacagagttcttcttccacactatggctggtcgtgagggtttggtggac
actgctgtgaaaactgcagagactggatacatgcagaggcgtctggtgaagtccctggag
gatctgtgctcgcagtacgacctgaccgtgcgcagctccacgggggatatcatccagttt
atatacggcggcgacggcctggaccccgctgctatggaggggaaggatgagccgctcgag
ttcaagagagtcctcgacaacattcgggcggtctacacgtgtcaagatcaacccgccctc
agtcagaacgagctggtcctcactgccgacgccatcatgaaaagagctgacttcctgtgc
tgcagagacagctacttggaggaattaactgacacaggctcagagaagtacctggaggag
attaagaaattcatcaagagcgtttcagagaggatcaagaagaccagagacaagtacggc
atcaatgacaacggcactagtgagcccaaagtcctctatcagctggaccgtattaccccc
acccagctggagaagtttcttgaaacctgcagggacaaatacatgagagcccagatggag
ccgggctcggcggtaggagccctgtgcgcccagagcatcggagagcctggcactcagatg
accctgaaaacctttcacttcgccggcgtagcgtcgatgaacatcaccctgggagtgcct
cgcatcaaagaaatcatcaacgcctccaagaacatcagcactcctataatcacggcccat
ttggacagcgaagacgacgctgactttgccaggctggtgaaggggaggattgagaaaact
cttcttggggagatttctgagtacatagaagaggtttttctcccagatgactgcttcatc
ctggtgaaattgtctctggagagaataaggctgctgcggctggaggtgaacgcagaaacg
gtgcgttactccatctgcatgtcgaagctacgagtcaaaccaggagacattgccgtgcac
ggcgaggcggtggtgtgcgtgtccccccgagagaacagcaagagctctatgtactacgtg
ctgcagtctttaaaagaggagcttcctaaggtggtggtccagggaatacccgaggtggcc
cgggccgtcattcacattgacgagcagagcggcaagaacaagtacaagctactggtggag
ggcgacaacctgagaggcgtcatggcaacgcatggagtcaacggaagcaggaccacttca
aacaacacgtacgaggttgaaaagaccctgggtattgaggctgctagatccaccatcatc
aatgagattcagtacaccatggtgaaccacgggatgagtatcgaccgacgtcatgtcatg
cttctcgctgacctcatgtcctataagggggagattctgggaatcaccaggttcggttta
gccaaaatgaaggagagcgtcctcatgctggcctcctttgagaaaacagctgatcacctc
ttcgatgcagcctattttggacagaaggactcggtctgcggtgtgtctgagtgcatcatt
atggggatcccaatgaatatcggaacagggttgtttaaactcctgcacaaggctgacaag
gacccctctcctgctaaaaggcctctgctctttgacaacacagacttccatatacctctg
atcacatag
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integrated database retrieval system
