Mugil cephalus (flathead mullet): 125023432
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Entry
125023432 CDS
T08342
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03013
Nucleocytoplasmic transport
mcep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125023432 (srrm1)
03015 mRNA surveillance pathway
125023432 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125023432 (srrm1)
03041 Spliceosome [BR:
mcep03041
]
125023432 (srrm1)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125023432 (srrm1)
Spliceosome [BR:
mcep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
125023432 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
125023432
NCBI-ProteinID:
XP_047466649
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Position
17:complement(7074606..7084433)
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AA seq
861 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLDEKHPDSKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKVDEDKKEKDKDNRERAQSKSPRRRKTRSPSPRRR
SPVKRERKRSPSRSPRRKASPVSGSSPPPPLMQLPTKPSEQLVESDTPGSAMPEPVIQEA
SSTCDTVVEVVKADSVTEVKEPSPDKTHKKEERPRSREREKDTRRERPHHRSRSHSRSRR
RRSRSRSFSPRRRPSPRRRMSPRRRSPPRRGPAGSRHRHRRSPVRRRRSRSASSSGSSSS
GSRSPKKAMKRISNTPPRKPMHRPDTSISPAGKDRRSLSPRARRGRGSPSPPRSSGLKRR
QGGRGDSPPDNIKPRLSEGSDSEEDKNDKGATADSVQQRRQYRRQNRQSSSDTGSSSSED
EGPKRPAAGPGARNGEVRRRRSRTPSPRRRHRDVSPRKRRSPSPPRRRRSPSPPRRRRSP
SPPRRRSPSPPPRRRSASPRRYSPPIQRRYSPSPLPLQKRKLSSSPPKRSSPGAKRRSSR
SPKRRSSPPPRRRSPPSSMSPPRHRRSPMLSSARPGRDTRSPLEATRRRSPSLGNRSHNI
RGSRSPQGRFETSSTSPSNQRRKQSPSHSSKLIRRVSRTPEPRNNQRSSPSPQPLRRVSS
RSVSPQPAAQKRPVPASASPSPSRSASASPPPAKKASSGSGSRSPSKTSDADNSGKKKKK
KKEKKHKKEKKHKKHKKHKKEKSAGTAAGDGQENQAVEEDGESKKESDSEVDDSLDDLEK
HLREKALRSMRKAQLSPSQMS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggatttttccgcggtacaagtgcggagcaagacaaccgtttcagcaacaag
cagaagaaactgctgaagcagctgaaatttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctagaagtcatcaaaccatggattactcagcgagtgacagagattctc
gggttcgaggacgacgtcgtcatagagttcatatttaaccagcttgatgaaaagcacccg
gatagcaaaatgatgcagatcaacctgacaggcttcttgaatgggaagaacgcccgggag
ttcatgaaggacctgtggcccttgctgctgagtgcccaggagaacattgctggcatcccc
tctgcttttctggaacaaaagaaagaggaaatcaaacagagacagatcgaacaggagaag
ctcgcttctctgaagaaggtggatgaagataaaaaggaaaaggacaaagacaacagagag
agggctcagtcaaagagcccaagaaggaggaagacaaggtcaccatcaccacggcgaagg
tcaccagtgaagcgggaaaggaaacgcagcccatcacgatccccaagacgcaaagccagt
ccagttagtggcagttcaccccctccacctctgatgcagctaccgacaaagccttcagag
cagcttgtggagtcagatacaccaggaagcgccatgccagaaccagtcatccaagaagca
tcttctacctgtgatacagttgtggaggtggtaaaagcagattctgtgactgaggtcaaa
gaaccgtctccagataaaactcataagaaagaggaaaggccgaggtctcgtgaaagggag
aaggataccaggagggaaagacctcaccatcgctcccgctctcattcccgttctcgcagg
cgacgttcccgttctcgatctttctcccctcgtagaagaccaagtcccagaaggagaatg
tctcctcgtcggaggagcccccccagacgtggccccgctggctccagacacagacataga
cgctcccccgtccgcaggaggcgctctcgctctgcttcatcatctggcagcagctcttca
ggctctcgctcgcctaaaaaagcaatgaaaagaatatcgaacacaccacccagaaaaccg
atgcatcgtcctgacacctccattagccctgccgggaaggacaggcgatcgttgtcccct
cgagcaagaaggggccggggctctccttccccacctaggtcatcaggtttaaagcgaaga
caaggaggaaggggtgattctccacctgataatatcaaacccagactgtctgaaggatca
gattcagaggaggataaaaatgacaaaggggcaacagcagattcggtgcagcagcggcgt
cagtatcgcaggcagaatcgacagtcttcttcagatacaggttcatcctcctcagaagac
gagggtcccaagaggccagcagcaggaccaggtgccagaaatggtgaagtgaggaggaga
cgcagccgcacaccttcccctcggaggcgacatagagatgtctctcccagaaaaagacgt
tctccatctcctccacgaagacgtcgctccccttcaccaccacggcgtcgcaggtcacca
tctcctcctagacgcaggtctccatccccgccaccccgtcgtagatctgcatcccccagg
cgatattctcccccgatccagcgtcgatacagcccttcccctttacctctacagaagcgg
aaactttctagttcacctccaaagcgctcttctcctggagccaagcgacgctcctccagg
tcccctaagcgcaggagctctcctcccccaaggaggcgctcacctccctcctccatgtct
ccacctagacacaggaggagtcccatgttgtcttctgccaggccaggcagggatacaaga
tctcctcttgaggccaccaggcgccgctccccatcccttggaaaccgcagtcacaatatt
aggggttcccgcagtccccagggacgatttgaaacctccagtacgtctccatctaaccag
cgaagaaagcaatccccttcccacagtagtaaactcatccgcagagtgtcccgtacccca
gagccacgcaacaaccagagatcctctccgagcccccagcctttgaggagagtgtcctcc
agatctgtgtctcctcaaccagcagctcagaaacggccagtgcctgcttctgcctccccc
tcaccctctcgctctgccagtgcgtctccaccacctgccaagaaggctagtagtggttcc
ggcagtcgatcgccaagcaagacttcggatgctgacaacagtggaaagaaaaagaagaag
aagaaggaaaagaaacataagaaagagaagaaacacaagaagcacaagaagcataagaag
gagaagagtgctggcactgctgctggagatggacaagagaaccaggctgtggaggaggat
ggagagtcaaaaaaggaatccgacagtgaagttgacgacagcttggatgatctggaaaag
caccttagagagaaggccctgcgctccatgaggaaggcccagctgtctccgtcacagatg
tcctga
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