Mugil cephalus (flathead mullet): 125023457
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Entry
125023457 CDS
T08342
Symbol
actn1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04510
Focal adhesion
mcep04520
Adherens junction
mcep04530
Tight junction
mcep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125023457 (actn1)
04520 Adherens junction
125023457 (actn1)
04530 Tight junction
125023457 (actn1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125023457 (actn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125023457 (actn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcep04812
]
125023457 (actn1)
04147 Exosome [BR:
mcep04147
]
125023457 (actn1)
Membrane trafficking [BR:
mcep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125023457 (actn1)
Cytoskeleton proteins [BR:
mcep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125023457 (actn1)
Exosome [BR:
mcep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125023457 (actn1)
Exosomal proteins of colorectal cancer cells
125023457 (actn1)
Exosomal proteins of bladder cancer cells
125023457 (actn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Motif
Other DBs
NCBI-GeneID:
125023457
NCBI-ProteinID:
XP_047466704
LinkDB
All DBs
Position
17:19208390..19268392
Genome browser
AA seq
893 aa
AA seq
DB search
MYNMDHYNDDEDYMQQQDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDF
RDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGN
AKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGF
CALIHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIM
TYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLEN
RMPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGK
MVSDINNAWGGLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTDGKEDMLQK
RDYETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQRI
CDQWDALGAMTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVH
TIEEIQGLSTAHEQFKATLPEADKERQAILGIHNEIAKIVQTYHVNMAGTNPYTTINPQE
INAKWDKVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQTKMEEIGRISIE
MHGTLEDQLTHLRQYEKSIINYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQ
LLTTIARTINEIENQILTRDAKGISQEQLNEFRASFNHFDRDHSGTLGAEEFKACLISLG
FDIANDAQGENEFSRIMSIVDPNRMGLVTFQAFIDFMSRETADTDTADQVMASFKVLAGD
KNYILADELRRELPPDQAEYCIARMAPYTGHDGVPGALDYMSFSTALYGESDL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtataatatggatcactataatgacgacgaagactatatgcagcaacaagacgactgg
gatcgggatctgctcctggatcctgcatgggagaagcagcagagaaagacatttacagct
tggtgtaactctcacctgaggaaagcgggcacacagattgagaacatcgaggaggacttc
cgggatggactgaaactaatgctgctcctggaggtcatctcaggcgaacgcttggctaaa
ccagagagaggcaaaatgagagtccacaagatctccaacgttaacaaagctctggacttc
atcgctagcaaaggagtgaagctggtttctattggagcagaagagatcgtagacggcaac
gctaagatgaccctgggaatgatctggaccataatcctccgctttgccatccaagacatt
tctgtggaagagacatctgccaaagagggtctcctgctgtggtgccagaggaagactgca
ccctacaagaatgtcaacatccaaaactttcacatcagctggaaagacggtttgggtttc
tgcgcactcattcatcgacaccgtccagagctcattgactatggaaaactgcgcaaggat
gaccccatgaccaacctgaacacagccttcgacgtggcagagaagtacctggacattccc
aagatgttggacgcagaagacattgtgggtactgcccgtccggacgagaaggcgatcatg
acctacgtctctagcttctaccatgccttctccggcgcccagaaggcagagacagcggcc
aacaggatctgcaaggtgctggctgtcaaccaagagaatgagcagctgatggaggactat
gagaagctggccagtgatctgctggagtggatccgtcgcaccatcccctggctggagaac
cgaatgcctgagaacaccatgcaggccatgcagcagaagctggaggacttcagagattac
cgccgcctccacaagccgcccaaagtgcaggagaagtgtcagctggagatcaatttcaac
accctgcagaccaagctgaggctcagcaacaggcccgccttcatgccctcagagggaaag
atggtctcggacattaacaatgcctggggaggtctagagggggcggagaagggctacgaa
gagtggctcctcaatgagatccgcaggctggaaagactcgaccacctggcagagaagttc
cgccaaaaagccgccatccacgaagcctggaccgacggtaaagaggacatgctgcagaag
cgggactacgagacggcctctctgtcggagatcaaggccctgctgaagaaacacgaggcc
tttgagagcgacctggctgcacaccaagaccgcgtggagcagatcgcagccatcgcgcag
gagttaaatgagctggactactacgactccccgagtgtaaacgctcgctgccagcggatc
tgtgaccagtgggacgcactcggagctatgacccagaaacgcagtgaagctttgcagagg
accgagaagctgcttgaaaccatcgaccaactgtaccttgagtttgccaaaagagcggct
ccgttcaacaactggatggagggcgcgatggaggacctgcaggacaccttcatagtccac
accatcgaagaaatccagggactaagcacggcccacgagcagttcaaggccacgctgccg
gaggccgacaaggagcgccaggccatcctgggcatccacaatgagattgccaaaattgtg
cagacctaccacgtgaacatggctggcaccaacccttacaccaccatcaacccacaggag
attaacgccaaatgggataaggtcaggcagctggtgcctcagcgcgaccaggctctgatt
gaagaacacgcccggcagcagaacaacgagcgtctgcgcagacagtttgccaaccaagcc
aacgtcatcggaccctggatccaaaccaagatggaggaaatcggccgcatctcgatcgag
atgcacggcaccctggaggaccagctgacgcacctccgccagtacgagaagagtatcatt
aactacaagccaaagatcgaccagctggagggagaccaccagctcatccaggaagctctc
atctttgacaacaagcacaccaactacaccatggagcacatccgcgtgggctgggagcag
ctcctcaccaccatcgcccgcaccatcaacgagatcgagaaccagatcttgacgcgagac
gccaagggcatcagccaggagcagctgaatgagttccgggcttccttcaaccacttcgac
agggaccactcgggcactctgggcgcagaggagttcaaggcctgcctgatcagcctgggc
ttcgatatcgccaacgatgcacagggggaaaacgagttctcccgcatcatgagcatagtg
gaccccaacaggatgggcctcgtcaccttccaggccttcatcgacttcatgtcccgcgag
acggccgacacggacaccgccgaccaggtcatggcctccttcaaagtcctggcaggggat
aagaactatatcttagctgatgagcttcgtcgggagctgcctccggaccaggctgagtac
tgcatcgcccgtatggccccttacaccggccacgacggcgttcccggagccctcgactac
atgtccttctccaccgctctgtacggggagagcgacctctga
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