Mugil cephalus (flathead mullet): 125023461
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Entry
125023461 CDS
T08342
Symbol
rtf1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog isoform X1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125023461 (rtf1)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
125023461 (rtf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
125023461
NCBI-ProteinID:
XP_047466711
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All DBs
Position
17:19502619..19514194
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AA seq
677 aa
AA seq
DB search
MVSVKKRKGRVVIDSDSEDSASDDNLDEELLSLAKRKRVDSGEQEEPVSKPAASTDSETS
DSDDEWTVGGTKGKKKVKQGKGSEKKNATKKKVNKTTASGSSDGDSSAESSAPEEGEVSD
SESNSSSSSSDSDSSEDDVFRDGYDDDLMGDAEDRARLEQMTEKEREQELFNRIEKREVL
KRRFEIKKKLRTAKKKEKEEKKKKQEEEQEKRKLSQVQDAQVVMSHNKERRSKRDEKLDK
KSQAMEELKAEREKKKNKTAELLAKRQPLKTSEVYSDDEEEEEEDDDKSSVKSDRSSRSS
SYDDDEKEETPPKSQPVSLPDELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSS
KPVYRVAEIVDVVETAKVYQLGSTRTNKGLQLRHGGDTRVFRLEFVSNQEFTESEFMKWK
EAMMVASMQVPTLDEITKKEQSIKEALNYKFNDKDIEDIVKEKDRFRKAPPNYAMKKTQL
LKDKAMAEESGDGEKVKVIQDELNELEERAEALDRQRTKNISAISYINQRNRSWNIVESE
KALVAEGLNAKNQQMDPFTRRQCKPTMVSNARDPSVHAAILAHLNQKYGSGSGADPSGGE
KNKLGQANPKDKDVPKPTTDLSEDLFKVHDFDVKIDLQVPNAEAKSLSVSSNALPVKDGA
PRRSLNLEDYKKRRGLI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgtaaagaagcggaaaggtcgagtcgtgattgactccgactcagaagacagc
gccagtgacgacaacttagacgaggagttattgtctttggcgaagaggaagagggttgat
tccggtgagcaggaagagcctgttagcaaaccagcagcttccacagattcagagacatct
gacagcgacgatgagtggactgtgggcggcacaaaaggcaaaaagaaggttaaacaaggg
aaagggtctgaaaagaagaacgctacgaagaagaaggttaataaaacgacggcgtccggc
agctcagatggagacagctcagctgagagctctgcaccggaggagggcgaggtgtcggat
tcagagagcaacagctcgtcctccagctccgactcggactcgtccgaggacgacgtgttc
agggacggctacgacgacgacctgatgggcgacgccgaggaccgagctcgtctggagcag
atgacggagaaggagagggaacaggagctgttcaacagaattgagaagagagaggtgcta
aagagacggtttgaaattaagaagaagctgaggacggcaaagaagaaagagaaggaggag
aagaagaagaagcaggaggaagagcaagaaaaaaggaaactatctcaggttcaagacgca
caagtggtcatgtcacacaacaaggagagacgatccaaacgcgacgagaaactcgacaaa
aaatcccaggccatggaagaactgaaggctgaacgtgagaagaagaaaaacaaaacagcg
gagctcctggctaaacgtcagcccctgaagacgagcgaggtttactccgacgacgaggaa
gaagaggaggaagacgacgacaagtcatcggtgaaaagtgatcgaagttcgcgttcttcg
tcgtacgatgacgacgaaaaagaagagactccaccgaagtcgcagcccgtttctctaccg
gatgagctcaacaggatccgtctgtccagacacaagctggagcgctggtgccacatgccc
ttcttcgccaagacggtgaccggctgcttcgtgaggatagggatcggcaacagcagcagt
aaaccggtctacagggttgctgagattgtggatgtagtagagacagcgaaggtttaccag
cttggatcaacgcgaacaaacaagggattacaattaagacatggtggcgacacgcgggtt
ttcagactcgagtttgtatcaaatcaagagttcacagaaagtgaattcatgaagtggaaa
gaggcgatgatggtcgccagcatgcaggtaccgactctcgacgaaatcaccaagaaggag
cagtccatcaaagaagctctgaactacaagttcaacgacaaagacattgaagatatcgtt
aaagaaaaggacagattcagaaaagcgccacccaactacgccatgaagaaaacacagcta
ctcaaagacaaggccatggcagaagaaagtggagacggtgagaaagtaaaagttatccag
gacgaactgaatgagctggaagaacgagccgaagctctggacagacagaggacaaagaac
atctctgccatcagctacattaaccagaggaacagaagctggaacattgttgagtctgag
aaagctcttgtggcagaaggattaaacgcaaaaaaccaacagatggacccgttcacacgg
aggcagtgcaaacccaccatggtgtcaaatgccagagacccgtcagtccacgcagctatt
ctcgcacacctgaaccagaagtacggctctgggtccggagcagatccctctggcggagag
aagaacaaactgggccaagcaaacccaaaagataaagatgttcccaagccaaccactgac
ctctcagaagacttgtttaaagttcacgattttgacgtcaagatcgaccttcaggttccc
aatgcagaagcaaagtccctgtccgtgagctctaatgcactgccggtgaaggacggcgcc
ccccgcaggtccctcaacctggaggactacaagaagaggagggggctgatctga
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