Mugil cephalus (flathead mullet): 125023520
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Entry
125023520 CDS
T08342
Symbol
shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcep04121
]
125023520 (shprh)
Enzymes [BR:
mcep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125023520 (shprh)
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125023520 (shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
TPR_10
TPR_12
SAMD1_WH
Motif
Other DBs
NCBI-GeneID:
125023520
NCBI-ProteinID:
XP_047466793
LinkDB
All DBs
Position
17:complement(18360630..18373399)
Genome browser
AA seq
1666 aa
AA seq
DB search
MSSRRKRAPPVRVDEEAKKKLNWNMLDDRKTEEILEDNQIPSCSIISDEPTTSSTFLFTS
EDVTEAVNSRSVQFLDELPGTSSDSTSASASLAITVLPSSKLSHTWKALVGEFSVRPAFL
PSDCEQRTFTLHRMGDQLCLSYSSCEENSGQQWRPEEDICTAACSLSRIPLEDLDWLQKR
RVVQLCHQTEEESVKVGIYLMETGLGKPDFLSEGNARLKKANQLMQKLMEYFYDFIIPEV
VENEEEECDTDLERQNVEELYDYVRHLHQNESHEVTYDVQHKALIPVLRPYQSQAVNWML
RREKCRNTSPKEQSLHFLWREVVTLCGKKLFYNPFTGCLMREFPLAGIEWPGGILADEMG
LGKTVEVLALILFHTRQDLEQETLTLPVGKSVNYFVPPPPLERKKVVHCKSEVQPKVKIS
YPAVRVMLLTAIKEMKSGKGASVNAIFTYIRATYGYDLLKNRNHIKKTLTKLIDEGVVDR
VKGRGLAGSFKLGKNYKETKKILAGASKPTFKATESPPRKMFQRRAKEKAEAALQNSLSE
DGKDVSSPTSDCPAAEEAKKEWDESVNEKSDQSDDTLDTSTASLQMSEDKSESDVQGTRR
IEDLPEERGKAAQLDLREEEEVVEEDETPTRASVVPFNTPDYRFECICGELGLVDYKARV
QCMNCQLWQHAHCVNYKEESLETTPFYCPHCLVAMKPVSTGATLIISPSSICHQWVEEIN
RHIRSSSLRVLVYQGVKKHGFIQPHMLAEQDVVITTYDVLRSELNYVDIPHSNSKDGRRF
RNQKRYMAVPSPLVAVEWWRICLDEAQMVECPTAKAAEMALRLASVNRWCVSGTPVQRGL
EDLYGLILFLGVDPYWVKHWWDQLLYRPYRRGNTEPLYNVIAQLLWRSAKKDVIDQIQIP
PQTEEVHWLHFSPVEGHFYHRQHEVCSQDALVKLRKISDWSLKLGSLDRRTVNTILYPLL
RLRQACCHPQAVRGEFLPLQKSTMTMEELLKSLQKKCRVECEEAHRQLVCALNGLAGIHI
IRGEFVEAAEMYREVLRSSEEHKGRLKTDSLQRLHATHNLMELLSAKHPGIPPTLRDDRL
SEEAEQLRQHYMTKYDSEVADAHQALQPVLLNIKELKRKVNLKSPWWLEVIQRSIRCSND
DDLVSRIKNELTSSYKQQANKLSMADKFRDACGLQFLLTTQMQDLMKSQKTVQDAVKRLE
GPASQKVIDEATVCHLRPMRLPLNNCVFCKADELFTDYESKLFSHTVKGQTAIFEEMIED
EEGLVDDRLPTTSRGLWAASETERTLKAILSFAKVKRVDPELVEEGNTFMELFENWKKEY
KVLHEYWMVLRNHVSAIDELGMATERLRVRLPDEPKPKLLHIIEPHEVEQNRVKLLNDQA
VAKSQLQKKLGQFLYLTNLEKSQDKATGGLNPEPCPICARPLGQEWAVLTCGHCFCNECI
AIIVEQYSVGSRRRAIKCAICRQTTSHAEISYVFTTQSSSQDQDIPVKGSHSTKVEAVVR
TLKKIQVTYPGAKCLVFSTWQSVLDIIAKALFDNNLEFSQINGIHKFQENLSSFKYEEKI
NILLLPLHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTFVHRFLIKST
IEERMQAMLKTAEKSHTSTPMKHSEAAVLTVADLADLFTEDTEPLE
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcagaagaaagagggcccctccagtgagggtggacgaagaagccaagaagaaa
ctgaactggaacatgctggatgaccgcaagaccgaggagatcctagaggacaaccagata
ccttcctgctccattatttcagacgaacccacaacaagcagcacctttctcttcacctca
gaggacgtcaccgaagccgtcaacagccgctctgtccagtttttagatgagcttcctggc
acgtcgtcagatagcacctctgcctccgcctcccttgcgatcacagtgttgccatcctca
aagctgagccacacctggaaggccctcgttggggagttcagcgtacggccggcttttctc
ccatctgactgtgaacagaggactttcacgctccacaggatgggtgaccagctgtgcctc
agctacagcagctgtgaggaaaactcagggcagcagtggaggccggaggaggacatttgt
acagcagcgtgcagcctcagtaggatcccgctggaggacctcgattggctgcagaagagg
agggtggtgcagctctgccatcagacagaagaggagtcagtcaaggttgggatttacttg
atggaaactgggcttggaaagccagacttcctcagcgagggaaacgctcggctaaagaaa
gcaaatcaactaatgcagaagttaatggagtatttctacgatttcattatcccagaagtt
gttgaaaatgaggaagaggaatgtgacaccgacctggaaaggcaaaatgtcgaggagctc
tacgattacgtgcggcatctgcaccagaacgagagccatgaggtgacgtatgacgtgcag
cacaaggctcttattcctgtgctcaggccttatcagagccaggcggtcaactggatgctg
aggagggagaagtgcaggaacacctcacctaaagaacaatcgctacatttcctctggcgg
gaggtggttactttgtgtggcaagaagttgttttataacccttttacaggctgcttaatg
cgtgaatttcccttggctggcatcgagtggcctggtgggatcctggccgatgagatgggg
ctcggaaagacggtggaagttctcgcgctcatcctgtttcacacccgacaagacctggaa
caggagaccctcacgcttcccgtgggaaaatctgtgaattacttcgttcctcctcctcca
ctagaaagaaagaaggtcgtccattgcaagtctgaagttcagcctaaagtgaaaatatcc
tacccagccgtccgtgtcatgctgctcactgcgataaaggagatgaaatccggcaaaggg
gcctcagtcaacgccatcttcacctacatccgtgccacttacggctacgacctcttaaag
aaccgcaaccacattaagaagacgctgaccaagctcatagatgaaggcgtggtcgaccgc
gtcaaaggtcgcggcttggcggggtcattcaagctgggcaagaactacaaagaaacaaag
aagatattagccggagcatccaagcctactttcaaagcgacagagagtccacccaggaaa
atgtttcagagacgagccaaggagaaggcagaagccgctctgcaaaactccctctcagaa
gatgggaaagacgtgagctcccctacgtctgactgccctgcagccgaggaagcaaagaag
gaatgggatgaaagtgtgaacgagaaatcggatcagtcagacgacacgctggatacctcc
acagcgtccttacagatgtctgaggataaaagtgagtcagacgtacagggcacgcggagg
atagaagatctacctgaagaacggggaaaagctgcacagctcgatttacgggaggaggag
gaggtggtggaggaggatgagacccccaccagagcgtccgtcgtccccttcaacacccct
gactaccgctttgagtgtatctgcggtgaactgggcctcgtcgactacaaggctcgagtc
cagtgtatgaactgtcagctgtggcagcacgcacactgcgtcaactataaagaggagagc
ctcgagacgacgccgttctactgccctcactgcctggtagccatgaaaccagtgtccacc
ggtgccaccctcatcatctccccaagctccatctgtcaccagtgggtggaggagatcaac
cggcacatcaggtcctcctccctaagggtgctggtttatcagggtgtgaagaaacacggc
ttcatccagccgcacatgctcgccgagcaggacgtggtcatcaccacctacgacgtgctg
cgctccgagctcaactacgtggacattccccacagcaacagcaaagacggccgccgcttc
cgcaaccagaagcgctacatggccgtacccagtcccctggtggccgtggagtggtggcgc
atctgtctggacgaggctcagatggttgaatgccccacggcgaaggctgcagaaatggct
ctgcgccttgcatccgtcaaccgatggtgcgtcagtggtactcctgtgcagagaggctta
gaagacttgtatggcctcatcctcttcctcggggtggatccgtactgggtgaaacactgg
tgggaccaactgctttatcgcccctatcgacgcggcaacacagagcctctgtacaacgtc
atcgctcagttactatggcgatctgcgaaaaaagacgtcatcgatcagattcagatccca
ccccagacggaggaggtgcactggctccacttctcccccgtcgagggccacttctaccac
cgccagcacgaggtctgctcccaggacgctctggtcaaactcaggaagatctccgactgg
agcctgaaactcggcagcctcgaccgccgcaccgtcaacaccatcctgtacccgctgctc
aggctgcgccaggcctgctgccatccgcaggccgtgaggggggagttcctgcccctgcaa
aagagcaccatgacgatggaggagctcctgaagtccctgcagaagaaatgtcgagtggag
tgtgaagaagctcacagacaattggtgtgcgctctcaacggcctggctggaatccacatc
atcagaggtgagtttgtagaggcggctgagatgtatagagaagtgcttcgttcatcagag
gagcacaaaggcaggctgaaaacggattcattgcagaggcttcacgctactcacaacttg
atggagctgttgagcgcgaagcatcctgggattcctccgaccctgagagacgaccgcctg
agtgaagaggccgagcagctgcggcagcactacatgaccaaatatgactcggaggtggcg
gacgcccatcaggccctgcagccggtgctactgaacatcaaagagctgaagcggaaagtc
aacttgaaatccccctggtggctggaggtcattcagagatcgatccgctgctccaacgac
gacgacctggtgtcccgcatcaagaacgagctgacgtccagctacaagcagcaagccaac
aagctctccatggcagacaagttccgtgatgcctgcggtcttcagtttctactcaccaca
caaatgcaagacttgatgaaatctcagaagacggtgcaagacgcggtgaagagactcgag
ggaccggcttcgcaaaaagttatagacgaggctacggtttgtcacctcaggcccatgcgg
ctgccgctcaacaactgtgtcttttgcaaagcggatgaacttttcacagattacgagtcc
aagctcttttcccatacggtgaaaggtcagacggccatctttgaagagatgattgaggat
gaagagggcctggtggacgaccgcctccccaccacgagccgaggcctgtgggcagccagc
gagactgagcgcactctgaaggccattttgtcttttgccaaagtcaagcgcgtggacccg
gagctggtggaggaggggaacacttttatggagctgtttgagaactggaagaaggagtac
aaggtgctgcatgagtactggatggtgctgcgtaatcatgtgtcagccatcgatgagttg
ggtatggccacggagaggctgcgtgtgcgccttcctgatgagccaaagcccaaactgctg
cacattatagagccccacgaggtggagcagaacagagtcaagcttttgaacgaccaagct
gtggccaagtctcagctgcagaagaagctcggccagtttctgtatctcacgaatctggag
aagtcccaggacaaggctactggagggctgaacccagagccgtgccctatctgtgcccgg
cccctgggtcaggagtgggcagtgctgacttgtggccactgcttctgtaacgagtgcata
gctatcattgtggagcagtacagcgtgggctcaaggcggcgtgccatcaagtgtgccatt
tgtaggcagacgacttcacacgcagaaatctcctacgtgttcaccacccagtcttccagt
caggaccaagacataccagtaaagggaagccactcgaccaaagtggaggcggtggtgaga
acactgaagaagattcaggtgacctaccccggggccaaatgtctcgtcttctccacgtgg
cagagtgtgctggacatcatcgctaaggccttgttcgacaataacttggagttttctcag
atcaacggaattcacaaattccaggagaatctgagttccttcaaatacgaagagaagatc
aacatccttctccttcctctccacacgggctccaacgggctgaacatcatcgaggcgacg
cacgtgctgctggtggagccgatcctcaacccggctcacgagctccaggccataggcaga
gtgcaccggattggccaaaccaagccaacgtttgttcacagattcctcatcaaatccacg
attgaggagagaatgcaagcgatgctgaagacggcagaaaaaagtcacaccagcacaccc
atgaagcactcggaggccgccgtgctgacagtcgcagacctggctgatctgttcactgaa
gacaccgaacctctggagtga
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integrated database retrieval system
