KEGG   Mugil cephalus (flathead mullet): 125023736
Entry
125023736         CDS       T08342                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
mcep  Mugil cephalus (flathead mullet)
Pathway
mcep03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mcep00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    125023736 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mcep03009]
    125023736 (wdr43)
Ribosome biogenesis [BR:mcep03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    125023736 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_THOC3 WD40_Prp19 WD40 Utp12 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th EIF3I Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_RSE1_2nd Beta-prop_SCAP Beta-prop_Nup120_160 Paf1 NBCH_WD40 SGL Tricorn_2nd Beta-prop_IP5PC_F PFF1_TM Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 125023736
NCBI-ProteinID: XP_047467183
LinkDB
Position
17:4064733..4079905
AA seq 653 aa
MAADGGSSSLQLPCVFSPKSRQYLAVCAQDGRLRIWNTDSKTLHQEYVPSAHLSATCVCI
AWGPCRTVKEGPQRKKRKSEAVQVEEKADLLAMGTAAGTVLIYSTAKGALHCTLDGGHSG
GVNCVQWHPEDSLLYSGSDDTYIVEWDLQTGKTRSKWKADRAAVTSLCVSPDGKLLLSAG
QTIKMWDLDTKEIYRKFTGHSTAVTTLRFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFTLTDEPRHIDLVASNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPS
CTVQMSDTKESPMPIPLLAAALGADTRTVLLAYGNHLQPVMERAEINTAERHVCLTRDVQ
TSLSLSIETTVSKVKTPVVKSKSKVLVPGLPGHQAPVKGTTEKRKKDADTKEMSIEERLG
EIDLSTASIEKGAPKGTASLQTDNFAVLLVQGLESSDASILNKVFQTRKEMVIKKTVARL
PLPAVLPLVEELTKRLQGHPFTAVLMVRWLKAVLMHHTSYLASLPDLVTQLGVLYHMIES
RVKIFHKLTKLHGKLYLLTTQVATNDSSNAVSDVDHTAKLVYEEESSEDDEASGDEGLHD
DDSDHWDEDEGMEETMEEDKREQSDDDDDPDSRTESKANGDEDMEHENESEEE
NT seq 1962 nt   +upstreamnt  +downstreamnt
atggcggctgatggaggcagttcttcgctgcagctaccctgcgttttttcacccaaatca
cgacagtacttagcggtgtgtgctcaggacggcagacttcgcatttggaacacagatagt
aaaacacttcatcaagaatatgtgccttcagctcatttgagtgccacttgtgtgtgcata
gcttggggaccatgccggacagtcaaggagggacctcagaggaagaagaggaaatcggag
gcagtgcaggtggaggagaaggcggacctgctggcgatgggcacagcggccggcactgtg
ctcatctacagtacagcaaaaggagccctgcactgtaccttggatggaggccacagtgga
ggagtgaactgtgtccagtggcaccctgaagacagcttattatacagcggctctgatgac
acctacattgtggagtgggacctgcagacaggcaagacacggagtaagtggaaggcagac
cgtgctgcagtgaccagtttgtgtgtgagccctgatggtaaactgctgctttcagctgga
cagaccatcaagatgtgggacttggacaccaaggagatttacaggaaattcacaggccac
tccacggcagtgacgacccttcgctttgccaccacgcggcctcctgacagcaacggcctc
tatttcctgtcaggcgctgcacacgatcgactgctcagtgtttggcaagtacgagaagat
gggaaggacaagaattcagtggtgtccttcacactgacggacgagccacgacacatcgac
ctcgtcgcatccaacagcaaggaagaggcggtgaggctggcagtagtgtgtaaagatggg
cagctgcatctctttgagcactttttaaatgggccctgtaagaagcccttgtcaccttcg
tgtacggtgcagatgtcagacacaaaggagtccccgatgccaatccccctgctggcagcc
gcgctcggagccgacactcggaccgtgctgctggcctatggcaaccacctacagccagta
atggagagagcggagatcaacacagcagagaggcatgtgtgtttgacccgggatgttcag
actagcttgtccctttccatcgaaaccaccgtttccaaggtgaaaactccagtagtcaaa
tctaagagtaaagtattggtcccagggcttcctggtcaccaagccccagttaagggaacc
acagaaaagaggaaaaaagacgcggacaccaaagagatgtcaatagaagagcgacttggt
gaaatcgacctgtctacagcctccattgagaaaggagctcctaaagggacggcctcgtta
cagacggataactttgccgtcctgctggtgcagggcctggagagcagtgacgccagcatc
ctaaataaagttttccagactcgcaaagagatggtaataaagaagacagttgctcggtta
cctctccctgctgtcctaccattggtggaagagctcacaaagaggctgcagggacatcct
tttacggccgttctgatggtacgatggctcaaggctgtactaatgcaccacacatcatac
ctagcatcgctgccagacctggttacccagctgggagtcctttatcacatgattgagagc
agagtgaagatcttccacaagctaacaaagctgcatgggaagctgtatctcttaacaaca
caggtggcgacaaatgatagcagcaacgcggtttcagacgttgaccacacagccaagctg
gtgtatgaagaggaatcctctgaggatgatgaggcctctggtgatgaaggtcttcacgat
gacgactctgatcactgggacgaggacgaggggatggaggagacgatggaagaggacaaa
cgggagcagtcggatgatgacgacgacccagacagtagaacagaatccaaagcgaatgga
gatgaggacatggagcatgaaaatgagagcgaagaagaatga

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