Mugil cephalus (flathead mullet): 125023736
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Entry
125023736 CDS
T08342
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125023736 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcep03009
]
125023736 (wdr43)
Ribosome biogenesis [BR:
mcep03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125023736 (wdr43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_Prp19
WD40
Utp12
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
EIF3I
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_RSE1_2nd
Beta-prop_SCAP
Beta-prop_Nup120_160
Paf1
NBCH_WD40
SGL
Tricorn_2nd
Beta-prop_IP5PC_F
PFF1_TM
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
125023736
NCBI-ProteinID:
XP_047467183
LinkDB
All DBs
Position
17:4064733..4079905
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AA seq
653 aa
AA seq
DB search
MAADGGSSSLQLPCVFSPKSRQYLAVCAQDGRLRIWNTDSKTLHQEYVPSAHLSATCVCI
AWGPCRTVKEGPQRKKRKSEAVQVEEKADLLAMGTAAGTVLIYSTAKGALHCTLDGGHSG
GVNCVQWHPEDSLLYSGSDDTYIVEWDLQTGKTRSKWKADRAAVTSLCVSPDGKLLLSAG
QTIKMWDLDTKEIYRKFTGHSTAVTTLRFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFTLTDEPRHIDLVASNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPS
CTVQMSDTKESPMPIPLLAAALGADTRTVLLAYGNHLQPVMERAEINTAERHVCLTRDVQ
TSLSLSIETTVSKVKTPVVKSKSKVLVPGLPGHQAPVKGTTEKRKKDADTKEMSIEERLG
EIDLSTASIEKGAPKGTASLQTDNFAVLLVQGLESSDASILNKVFQTRKEMVIKKTVARL
PLPAVLPLVEELTKRLQGHPFTAVLMVRWLKAVLMHHTSYLASLPDLVTQLGVLYHMIES
RVKIFHKLTKLHGKLYLLTTQVATNDSSNAVSDVDHTAKLVYEEESSEDDEASGDEGLHD
DDSDHWDEDEGMEETMEEDKREQSDDDDDPDSRTESKANGDEDMEHENESEEE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgatggaggcagttcttcgctgcagctaccctgcgttttttcacccaaatca
cgacagtacttagcggtgtgtgctcaggacggcagacttcgcatttggaacacagatagt
aaaacacttcatcaagaatatgtgccttcagctcatttgagtgccacttgtgtgtgcata
gcttggggaccatgccggacagtcaaggagggacctcagaggaagaagaggaaatcggag
gcagtgcaggtggaggagaaggcggacctgctggcgatgggcacagcggccggcactgtg
ctcatctacagtacagcaaaaggagccctgcactgtaccttggatggaggccacagtgga
ggagtgaactgtgtccagtggcaccctgaagacagcttattatacagcggctctgatgac
acctacattgtggagtgggacctgcagacaggcaagacacggagtaagtggaaggcagac
cgtgctgcagtgaccagtttgtgtgtgagccctgatggtaaactgctgctttcagctgga
cagaccatcaagatgtgggacttggacaccaaggagatttacaggaaattcacaggccac
tccacggcagtgacgacccttcgctttgccaccacgcggcctcctgacagcaacggcctc
tatttcctgtcaggcgctgcacacgatcgactgctcagtgtttggcaagtacgagaagat
gggaaggacaagaattcagtggtgtccttcacactgacggacgagccacgacacatcgac
ctcgtcgcatccaacagcaaggaagaggcggtgaggctggcagtagtgtgtaaagatggg
cagctgcatctctttgagcactttttaaatgggccctgtaagaagcccttgtcaccttcg
tgtacggtgcagatgtcagacacaaaggagtccccgatgccaatccccctgctggcagcc
gcgctcggagccgacactcggaccgtgctgctggcctatggcaaccacctacagccagta
atggagagagcggagatcaacacagcagagaggcatgtgtgtttgacccgggatgttcag
actagcttgtccctttccatcgaaaccaccgtttccaaggtgaaaactccagtagtcaaa
tctaagagtaaagtattggtcccagggcttcctggtcaccaagccccagttaagggaacc
acagaaaagaggaaaaaagacgcggacaccaaagagatgtcaatagaagagcgacttggt
gaaatcgacctgtctacagcctccattgagaaaggagctcctaaagggacggcctcgtta
cagacggataactttgccgtcctgctggtgcagggcctggagagcagtgacgccagcatc
ctaaataaagttttccagactcgcaaagagatggtaataaagaagacagttgctcggtta
cctctccctgctgtcctaccattggtggaagagctcacaaagaggctgcagggacatcct
tttacggccgttctgatggtacgatggctcaaggctgtactaatgcaccacacatcatac
ctagcatcgctgccagacctggttacccagctgggagtcctttatcacatgattgagagc
agagtgaagatcttccacaagctaacaaagctgcatgggaagctgtatctcttaacaaca
caggtggcgacaaatgatagcagcaacgcggtttcagacgttgaccacacagccaagctg
gtgtatgaagaggaatcctctgaggatgatgaggcctctggtgatgaaggtcttcacgat
gacgactctgatcactgggacgaggacgaggggatggaggagacgatggaagaggacaaa
cgggagcagtcggatgatgacgacgacccagacagtagaacagaatccaaagcgaatgga
gatgaggacatggagcatgaaaatgagagcgaagaagaatga
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