Mugil cephalus (flathead mullet): 125023804
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Entry
125023804 CDS
T08342
Name
(RefSeq) probable histone deacetylase 1-B isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03082
ATP-dependent chromatin remodeling
mcep03083
Polycomb repressive complex
mcep04110
Cell cycle
mcep04330
Notch signaling pathway
mcep04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125023804
03083 Polycomb repressive complex
125023804
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125023804
04350 TGF-beta signaling pathway
125023804
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125023804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcep03036
]
125023804
Enzymes [BR:
mcep01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125023804
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
125023804
HDAC complexes
Sin3A-HDAC complex
125023804
BRAF-HDAC complex
125023804
REST complex
125023804
SHIP complex
125023804
MiDAC complex
125023804
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
125023804
Heterochromatin formation proteins
Other heterochromatin formation proteins
125023804
Chromatin remodeling factors
NuRD complex
125023804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
125023804
NCBI-ProteinID:
XP_047467271
LinkDB
All DBs
Position
17:7120811..7126503
Genome browser
AA seq
490 aa
AA seq
DB search
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
SGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNKRISIRAHDKRIACEEE
FSDSEDEGEGGRRNAASFKKAKRVKTEGEKEGEEKEKKGEEETKEVKEEEKVPEEEKMDT
SKPKEESKTP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttacttcccaaggaacaaagaaaaaagtttgctactactacgatggtgatgtt
ggaaactattactacggccagggccatcccatgaagccccacagaatccgcatgacgcac
aacctgttgctcaactatggcctctacaggaagatggagatatatcgcccacacaaagcc
agcggagaggagatgaccaagtatcacagtgatgactacatcaaattcctgcgctcaatc
cgaccagacaacatgtcagaatacagcaaacagatgcagagatttaatgtgggagaggac
tgtccagtgtttgacggtttgttcgagttctgccagctctcagcagggggctccgttgct
ggtgccgtcaagctaaacaagcagcagacagatattgccatcaactgggctggaggtctg
catcacgccaagaagtctgaggcgtccggattttgctacgtcaacgacatcgtcctggct
attctggagttactgaaataccaccagagagttctgtacatagatattgacatccatcat
ggagatggtgtggaggaggctttctacacaacagaccgagtcatgaccgtgtccttccac
aagtatggagagtacttccctggcaccggtgacctcagggacattggcgctgggaagggt
aaatactatgctgtgaattacccactgagggacggcattgacgatgagtcatatgaagcc
atattcaaacccattatggccaaggtgatggagatgtaccagcccagtgcagtggttctc
cagtgtggagctgattctctgtctggagacaggcttggttgctttaacctcaccataaaa
ggccacgctaagtgtgtggagtacatgaagagcttcaacctgccgctgctgatgttgggt
ggaggaggttacaccatccgtaacgtggcacgctgctggacatatgagactgctgtagcc
ctggatagctccatccctaatgagctcccatataacgactactttgagtactttgggcca
gacttcaagctgcacatcagtccctccaacatgaccaatcagaacaccaacgactacctg
gagaagatcaagcagcgcttgtttgagaacttgcgtatgcttcctcatgcccctggagtt
cagatgcaggccatcccagaggatgctgtacaggaggacagtggagacgaggaggaggag
gatcccaacaagcgcatatccatccgcgctcatgacaagaggatagcgtgcgaggaggag
ttctctgactctgaggatgaaggtgaaggaggccgcagaaacgcagccagcttcaagaaa
gccaagcgggtcaaaaccgaaggagagaaagagggagaagaaaaggagaagaaaggtgag
gaggaaacaaaagaagtaaaggaagaagagaaggtgccagaggaggagaaaatggacaca
tccaagcctaaagaggagtccaagacaccataa
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