Mugil cephalus (flathead mullet): 125023961
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Entry
125023961 CDS
T08342
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcep03041
]
125023961 (ddx20)
Enzymes [BR:
mcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125023961 (ddx20)
Spliceosome [BR:
mcep03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
125023961 (ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Prothymosin
AAA_30
CMS1
AAA_19
Motif
Other DBs
NCBI-GeneID:
125023961
NCBI-ProteinID:
XP_047467893
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All DBs
Position
1:14364591..14371572
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AA seq
805 aa
AA seq
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MAASMRKAAHDVETRKRTEDVLLSEGIDFGSLLLSQAVLDGLSASGFQKPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFCTIALDSLVLENHATQVLVLAPTREIAVQIHSVVMAIGC
AMEGLECHVFIGGRPVSQDKLHLKKCHVAVGSPGRIKQLIELGMLSTASVRLFVLDEADK
LLEEGSFQEQINWIFSSLPVNKQMLALSATYPESLAQHLTRYMREPTFVRLNPSDMGLKG
LKQYYKLVQSHPLPHRVFEEKVQHLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLP
AVCISGGLSQDQRLEAMSKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMH
RIGRAGRFGTQGLAVTYCCHGEEENKMMAIAQKCGLSLSALPSTVEPGLMDEPCDWDVCA
EASTPDTLSRLFSRAEKRRRPKAEVHAYEPVVDKAEEQNSQRNPPEKTRPAPRRGAHCEE
NAGRISPAKDLPPRRPLQVNPTRKELQDALPKILPLSAFKNNGSTFMSLEEAEWDFQKFI
TTGLGRSVEVIREFRGREDGDPTDQSGHRESVTLHDDSRLNFRKSGEWRKSNFPPPRVIS
APSSSASDMEEDRGDAALQSSNQAASREHRAATRPLAETPAPTAPTSRASATKPKACAFP
APRVRGQTPRATSGRALSHGESSESVPSSESDRQTSQTAPAPARGDESKKMKREIGKPSK
KQSQEMKREPKWERDEEDCTDKEEEEEEEEEEEWSAESYWRACYRAWNDYYTSMSPFQDQ
NYYSAAYNWMAAYRMNAVYMEELLK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctccatgaggaaagcagcccacgacgtagaaacgcgaaagcggactgaggat
gtgcttctgtccgaggggatcgacttcggctccctgctgctgtcccaggccgtgctggac
ggactgtcagcctcgggttttcagaagccgtccccgatccagctcaaggcgatcccgctg
ggccgctgcggactcgatttgattgtgcaggccaagtcgggcacgggaaagacgtgcgtg
ttctgcaccatcgccctcgactctctggtcctggagaatcatgcaactcaggtgctcgtg
ttggctccaacgcgtgagatcgcagtgcagatccactctgtggtgatggctataggctgc
gccatggagggcctggagtgccatgtcttcatcggaggccggcccgtcagtcaagacaaa
ctccacctgaagaagtgtcacgtggccgtgggctcaccaggccgcatcaagcagcttatc
gagctgggcatgttgtccactgccagcgtcagactgtttgttctggacgaggcggacaag
ctgctggaggagggcagcttccaggaacagataaactggatcttctcctctttgcccgtg
aacaaacagatgctcgctctctctgccacttacccagaatcccttgctcagcaccttacc
cgctacatgagagagcccacctttgttagacttaatccgagtgacatgggcctgaaaggc
ctgaagcagtattacaagctggtgcagtcccatccactaccgcacagggtgtttgaggag
aaggtgcagcatttgctggagctgttcagtaaaatccccttcaaccaagccctagtgttt
tccaacttgcacacaagggctcagcacctggcagacatcctctcttccaaaggcttacct
gctgtttgcatctcaggtggtctgagtcaggaccagagactggaggcgatgtccaagctg
aagcagtaccagtgcagggtgctcatctccaccgacctgacgtccaggggcatagacgca
gagaaagtcaacttggtcataaacctggacgtgccgcaggactgggaaacctatatgcac
aggatcggacgggccgggcgcttcggcactcaggggctggctgtgacctactgttgccat
ggcgaggaggagaacaagatgatggccatcgctcaaaagtgtggcctcagtttgtctgcg
ctgccgtctaccgtagagcccgggttgatggatgagccgtgtgattgggatgtctgcgcc
gaggcctccactccagacacattatcccggctgttctctagggcagagaagaggaggcgt
ccgaaggctgaagtgcacgcgtatgagcccgtcgtggataaagctgaggagcaaaacagt
caaagaaaccccccggagaagactcgtcctgcacccagacgaggagcacactgcgaagag
aatgctggaaggatatcccccgccaaagaccttccgccgagacgtccccttcaagtgaat
cctactcgaaaagagctacaagacgctctgccaaagatccttccgctcagcgcgttcaaa
aataacggctcgacgttcatgagccttgaggaggccgagtgggacttccagaagttcatc
acgacagggttggggagatcagtggaggtcatcagggagttcagaggccgagaggacggt
gaccccactgatcagagtgggcacagggagtctgtcacgcttcacgatgacagtcgtcta
aatttccgaaagagcggtgaatggcgcaaatcgaactttccgcccccgagggtgatttct
gctccttccagttctgcctctgatatggaggaggatcggggcgatgcggcgctgcaaagt
tcaaatcaggctgcaagtcgtgaacacagagcggccactcggcctctcgctgaaacaccc
gcacccactgcgcccacatctagggcaagcgccactaaacccaaagcttgtgctttccct
gcacccagagtacgcggccagacgccccgtgcaacaagtgggagagctttgtctcacggc
gagagcagcgagtctgtgccgagctccgaatcagacaggcaaaccagtcagacggctccg
gctccggctcgcggagatgaatcgaaaaagatgaaaagggagattggaaaaccgagcaaa
aagcagtcacaagagatgaaaagggagccgaagtgggagagggatgaagaggattgcact
gacaaagaagaggaggaggaggaggaggaggaggaggagtggagcgctgaaagttactgg
agagcttgttacagagcctggaatgattactacacctccatgtcgccttttcaagaccaa
aactactacagcgcagcctacaactggatggcagcttatcgcatgaacgctgtctacatg
gaagagctcctgaagtaa
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