Mugil cephalus (flathead mullet): 125024161
Help
Entry
125024161 CDS
T08342
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125024161 (smc6)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
125024161 (smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_15
Fez1
TMF_TATA_bd
DUF3247
Motif
Other DBs
NCBI-GeneID:
125024161
NCBI-ProteinID:
XP_047467828
LinkDB
All DBs
Position
17:complement(18554151..18572596)
Genome browser
AA seq
1098 aa
AA seq
DB search
MSKRKAKEISDATAFKSRKVTSVENVPREKNHQVTSSNSFCHSTNTGDIGLIESITLKNF
MCHHFLGPFHFGPNVNFIVGNNGSGKSAILTALIVGLGGKATVTNRGLSLKDFVKTNENT
ADITVKLRNRGPDAYKKDVYGDSISIEHRISGDGCRTCRLKNKSGQLISNKKEELTAILD
HFNIQLDNPVSILSQEMSKQFLHSKNESDKYKFFMKATLLEQMKRDYIHIKHTKTVTRQQ
VERQEECLKDLKQEFLQKKERYENLASFSDMKAAVENLKKAMAWCLVREKEQLLQQLKED
IVNEENNCKHQDNLQLCQNKIIQVEKKLQFIRSRTDNLREEQDSMLEGNLKLREQVKVIR
KAHKEQELVYFRALNKLKQSEQEQNILLEKINKSKTSESANSDGETEYTKQQKTLCDLRE
QLAELQDKCSQLNEEIKNKHQALFTGKEERDKLSVEERNVQALYESKLKKKNQLLASRSN
KLKRFGDHVPDLLAAIGQACATGRFLKRPVGPIGACISLKDPTLAVAVECCLRGFVKAFC
CDNYKDEAVLQELMSHYYPKGNRPQIIVSPFSDKLYNIHGRKAHHPEYPSVLDIITATSP
VIINCLIDMRGIESILIIKEKDKARRVMQQGRPPKNCREAFTAEGDQVYPNRYYTSDFNT
AVYLGGDLEAEISMLESDLENHQAQLSRFQLQVNSVTEDIVNMENNLNSTVMTLKKTLAS
VNQIRAAITELETAGEEQVNDIRSLEEVAQENLQKIEAERQIVQEAKTELDRQREMVEDA
DAKYSSIRERIDQLSEEMEPQKDEQLKLEAECAKHERNLKILENKVKVHEDNIQAMRSDL
AQREEELQEYVAKATEISPERQQVSGSTKSIDSEITRLKKKIKVYESNHGEQEQVVREYA
EALALYREKTNQVRDLRRFIDRLDNIMSDRQNRYKIMRRSLSVRCKLYFNNFLIKMNCCG
SMIFDHNNETLSISVKPPGREEDGVSDMRSLSGGERSFSTVCFMLSLWEITESPFRCLDE
FDVYMDMHNRRICLDLLLELSERQHLRQFIFITPLTTSNLPKTDLIKIHQLRDPERERGQ
TGDEDDPQHEGGGFFLKV
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaggaaagccaaagagatcagtgatgcaacggctttcaagagccgcaaggtg
acatctgttgaaaatgttccacgagagaaaaaccatcaggtgacctcttccaacagcttc
tgccactctactaatacaggagacatcggcctcatcgaaagcatcactctaaagaatttc
atgtgccaccactttctcggtccgttccattttgggcccaatgtgaatttcatcgttgga
aacaatggaagtggaaaaagtgccattctcacagctctgattgtcggcctcggtggaaaa
gccaccgtgacaaacagaggactgtcgctgaaggattttgtgaagacaaatgaaaatact
gcggatataacagtgaagctgagaaaccgaggaccggatgcttacaaaaaagatgtttac
ggcgactccatctccattgagcatcggatctcgggtgacggatgtcggacctgcaggctg
aagaataaatcagggcaacttatctcaaacaagaaggaagaattaacggcaattttggac
cattttaacatccagctggataacccagtgtccattctcagccaagaaatgagtaagcag
ttcctgcattcaaaaaatgaatcggacaagtataagttcttcatgaaagcaactcttctg
gaacagatgaagagagattacatccacattaaacacactaaaacagtcacacgacagcag
gttgagagacaagaggagtgtctcaaggacctgaagcaggagtttctgcagaagaaggag
cgatacgaaaatctggcgtccttcagtgacatgaaggcggctgtggagaatctgaagaaa
gccatggcgtggtgtttggtcagggagaaggagcagctcctgcagcagctgaaggaggac
attgtaaatgaagagaataattgcaaacatcaggacaaccttcagctctgtcagaataag
atcatacaagtggagaagaagctccagttcatcaggagcagaactgacaatctgagagaa
gaacaagactctatgttagagggaaatcttaaactgagagagcaagtgaaggttattaga
aaagcccacaaggaacaggagcttgtttattttcgggctctgaacaaactcaagcagtca
gagcaagaacaaaacattctactggagaaaattaacaagtcaaaaaccagcgagagcgcg
aacagtgacggagaaactgaatatactaaacagcagaagaccttgtgtgatctgagggag
cagcttgcagagcttcaggataaatgctcgcagctgaatgaggaaattaagaacaaacac
caggcgcttttcacaggaaaggaggagcgggacaagctgagcgtggaagaaaggaacgtc
caggcgctgtacgagtcaaagctaaagaagaagaatcagctcctcgccagccggtcgaac
aaacttaagcggtttggagaccatgtccccgacctgttggccgccatcggtcaggcctgt
gccacgggacgcttcctcaagagacccgttggtccaataggggcgtgcatcagcttaaaa
gatcccacgttagccgtggccgtggagtgctgcctgcggggcttcgtcaaggccttctgc
tgtgacaactacaaagacgaggccgtccttcaggagctcatgtcccactattacccgaag
ggcaacaggccgcagattatcgtcagccctttctctgataaactctacaacattcatgga
cggaaggcgcatcatccggaatacccgtctgtgctggacataatcacagcaacgagcccg
gtcatcatcaactgcctgattgatatgcgagggatagaatcaattctcataattaaagaa
aaagacaaagcgcggagggtcatgcagcaaggccgtccgcctaagaactgccgggaggcc
ttcactgctgaaggagatcaggtgtatccgaaccgttactacacctccgacttcaacacg
gccgtgtatcttggtggagatctggaggctgaaataagcatgttggagtcagacctggag
aatcaccaggctcagctctccaggtttcagctccaagtgaactctgtgactgaagacatc
gtgaacatggagaacaacctgaacagcaccgtcatgaccctgaagaagaccctggcctct
gtgaatcaaatcagagcagcaataactgagctggagacggccggcgaggagcaagtcaac
gacatacgctccttggaagaagttgcccaagagaacctgcagaaaatcgaggccgagagg
caaatcgttcaagaggcaaagacggaacttgaccggcaacgtgaaatggtggaggacgca
gacgccaagtattcttcaatcagggaacggattgatcagctttcagaagagatggagccg
cagaaggacgagcagctgaaactggaggcggagtgcgcgaaacatgagcgaaaccttaaa
attttagagaacaaagtgaaggttcacgaggacaacatccaagccatgagaagtgacctg
gcccaaagagaagaagagctgcaggagtacgtggccaaagcgacggagatcagtcccgag
cggcagcaggtgagcggcagcaccaagagcatcgactcggaaatcacccgactgaagaag
aagatcaaggtgtacgagagcaaccacggcgagcaggagcaggtggtcagggagtacgcc
gaggccctcgctctctacagagagaaaaccaaccaagtgagggatctgaggaggttcatc
gatcggctcgataacatcatgtcggacaggcagaacagatacaaaataatgcgtaggtcc
ctctctgtcagatgtaagttatacttcaataacttcctgataaagatgaactgctgcggc
tcgatgatctttgaccacaacaacgagaccctctctatctctgtgaagcctccaggccgg
gaggaggacggtgtgagtgacatgaggtccctgtccggaggcgagcgctccttctccacc
gtctgcttcatgctttccctgtgggagatcacagagtcgcccttcagatgcctcgacgag
ttcgacgtctacatggacatgcacaaccggaggatttgtctggatctcctcctggagctc
tcagagcggcagcaccttcgacagttcatcttcatcacgccgctgaccaccagcaatctg
cccaaaacagaccttatcaaaatccaccagcttcgggacccagaaagagagcgaggtcaa
acgggagatgaagatgatccacaacacgagggaggagggtttttcctgaaggtttga
DBGET
integrated database retrieval system
