Mugil cephalus (flathead mullet): 125024269
Help
Entry
125024269 CDS
T08342
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03013
Nucleocytoplasmic transport
mcep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125024269 (pnn)
03015 mRNA surveillance pathway
125024269 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125024269 (pnn)
03041 Spliceosome [BR:
mcep03041
]
125024269 (pnn)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125024269 (pnn)
Spliceosome [BR:
mcep03041
]
Complex C
Other components
EJC/TREX
125024269 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
125024269
NCBI-ProteinID:
XP_047468004
LinkDB
All DBs
Position
17:complement(4916530..4921353)
Genome browser
AA seq
676 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQARRVGGPMAGPGGGRGRGV
NLLRRSLSDIGSGGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVSTEKQKRRSEIEQK
LEVQAETERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTK
TKPHIFYLPGKMCSATQKLLEDSTKKLNTVFEERREAFAEHLSKMESRPRRQPLRDQDGN
TAATGMDQSTEGKPAGQGVKLTGNKGRVEMEEEDEEDEEEERVKEGDSKVTEGDKGEEKE
AGGREVLKKVEEEEEGMELSEQGGGEKKEGEDQKEKGDKEVSPGSEEMEVEQGEEKEGRG
KEEEVETVSKQEPVDIRNEKTPDTQSPEPAMSTREVPDTSHQPSHTAGEPAEPSPMTQGA
SPTPEPQTVPTTPAQDLSVPGCEVQDSEVVNKAEQTKTGEEVSQKKLDSKGATPAKEEED
GGRGRKKDKDQRKGRSRSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSSSSNSSSR
SRSRDSGKRKRRPSDRVRDRKKGEERSHHKRGGSSGGGRDSKGSKERRKRRSEEGRGRSS
RSDRDHKDRDRKDKRR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcggagtttgcaagaccagctcgaaaaagccaaggaaagcttgaaa
aatgtggacgataatatccgcaaattgaccggacgtgaccccaatgaatcaagaccgggt
caggcccgtcgagtcggcggtcccatggcaggccccggaggaggtagaggacgaggagtc
aacctgctcaggcgtagtctctcggacattggaagcggcggcccccctgccaagcagaga
gacattgaaggagccctgctgagattggcaggggaccagagggccaggagagactcgcgt
cacgacagcgatgccgaggatgatgacgatgtcaaaaagccggcgttgcagtcgtccgtt
gtagctacctccaaggagcgaacgcgccgagatctcattcaggatcaaaccatggatgag
aagggcaagcagaggaatcggcgcatgtttggcctgctgatggggaccctgcaaaaattt
aagcaggagtccaacgtctccacggaaaagcaaaagagacgttcagagattgagcagaag
ctcgaagttcaggctgagactgaaagaaagaaggtggagaatgaaaagagggagctgttt
gaagagaggagagccaagcagacagagttgagactactggaacagaaagtggaattagct
caactacaagaggagtggaccagccacaataatcgcctggtgaaatacattcgcacaaag
accaagcctcatatcttctatctgcctggaaaaatgtgctccgcaacacagaaactcctc
gaagactccaccaagaaactaaatactgtgtttgaagagaggcgtgaggcatttgccgaa
cacctcagcaagatggagtcacgccccaggcgacagcctctccgtgaccaggatggcaac
acagcggcaacaggaatggaccaatcgacggagggtaagccagcaggtcagggagtcaag
ctgacaggtaataagggtcgtgtagagatggaggaagaggatgaggaagatgaggaggag
gaaagggtaaaagagggggatagtaaggtgacggagggggataaaggggaggaaaaagag
gcaggagggagggaagttttgaagaaggtggaggaagaggaggaagggatggagcttagt
gagcaggggggtggggagaagaaggaaggagaggatcagaaggagaagggagacaaagag
gtgagtccaggatctgaagagatggaagtggagcagggggaagagaaggagggcaggggg
aaggaagaagaggtagaaacagtcagtaaacaggagcctgtagacatccgtaatgaaaag
actccggacacccagtcccctgaacccgctatgagcactcgagaagtaccagacaccagt
caccagcccagtcacactgcaggggaaccagcagagccatctcctatgacccagggggcc
tccccaaccccagaaccccaaactgtacccaccacgcctgcacaggatctcagcgtccct
gggtgtgaggtccaggactcagaagtggtgaataaggcagaacaaacaaagacaggggaa
gaagtctcacaaaaaaagcttgattccaagggggccaccccagccaaggaggaagaggat
ggtggcagagggaggaagaaggataaagatcaaagaaagggccgcagtcgtagtaacagc
tcttcgtcgtcctcctccggctcctcctccagcggaagttcctcttcctcctccggatcc
agccgctcctcgtcgtcttcttcatcctcatcttcctcatcatccaacagcagcagccga
agtcgcagccgagacagtggaaagcgcaagaggagaccgtcggatagagtcagggacagg
aagaaaggagaagaaagaagtcaccataagagaggagggagcagcggaggagggagggac
tcgaagggatccaaggagaggagaaagagaaggagcgaggaagggaggggcaggtcgtcc
cggagcgatagggatcataaagatagagacaggaaggacaaaagacgctaa
DBGET
integrated database retrieval system
