KEGG   Mugil cephalus (flathead mullet): 125024428
Entry
125024428         CDS       T08342                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
mcep  Mugil cephalus (flathead mullet)
Pathway
mcep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125024428
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcep03041]
    125024428
Spliceosome [BR:mcep03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125024428
 Complex B
    125024428
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 125024428
NCBI-ProteinID: XP_047468152
LinkDB
Position
18:8163348..8171997
AA seq 982 aa
MADRTPGGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDEIKKKEDERAAAEIYEE
FLAAFEGGGEGKVKAFVRGGIANATKEEAAADEKKGKLYKPKSRFETQPKSILPLETPPQ
FLALDKRHSLKKSTEKEKKKSNLELFKEELKQIQEERDERHKMKGRVSRFEPLPGADGRR
SSDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASV
KIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPHPI
YIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPLLPPPKNKEEFEKTLSQAIVKVVIPT
ERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYYRWKLYSILQG
EAPVKWRTDDFRMFKNGSLWRPPPLNPYLHGPYDDGEEEEEEEESSKKGCLKEDERDKLE
EMLRGLTPRRGDIAEAMLFCLSHAEAAEEIVECITESLSILKTPLPKKIARLYLVSDVLY
NSSAKVSNASYYRKYFETKLCQIFADLNATYKTIQGHLQSENFKQRVMSCFRAWEDWAVY
PDPYLIKLQNIFLGLVNLTVEKEPVTLVVEAEPTEDIDGAPIGEFVDNTLLEDVDGVPID
AGPMDGAPIDGAPLDDLDGVPIKQLEEDIDGIPFDQSKETAFKVAPSKWEAVEESELQAQ
AVTTSKWEIFEQPEETKKNEEDSDDDDRTPRSEDNQSYSNPIREDSDTKAKTSEMNEEKR
IKLREIEVKVMKFQDELESGKRPKKPGQSIQEQVEHYRDKLLQKEKEKEKLEREKEKEKK
EKEKAEARLKELKKEKEKEDTPTRKERRLSPPVDRKRRHSGSPSPTRSSSRRGRSSSPRS
ERSERSERSDRSYSKDTTSRSSHKDSPRSSNKKSSKRSPSLPRTPKRSRRSRSRTPKKST
KKSRSKSRSPHRSHKKSKKSKH
NT seq 2949 nt   +upstreamnt  +downstreamnt
atggcggaccgaacccctggtggctctcagaaagctagcgctaaggcgctgcttgagagc
aaactcaagtctttcagcattggaaaaatggctgtggcaaagaggactctaagcaagaag
gaacaagatgaaatcaagaaaaaggaagatgagcgggcagcggccgagatttatgaggag
tttcttgctgcgttcgaaggaggaggagagggtaaagtcaaggcctttgtccgtggcggc
attgcgaatgcgacaaaagaagaagcagctgctgatgagaagaaaggaaagttgtacaaa
cccaagtcacgttttgagacccaaccaaaaagcatcttgcctttggaaaccccaccacaa
tttttagctttagacaaaagacatagtttgaagaaaagtactgaaaaggaaaagaagaag
agtaatttggagcttttcaaagaagaacttaaacaaatacaggaagaaagggatgaaaga
cataagatgaaaggacgcgttagtcgattcgaacccctccctggcgcggacggaagacgc
tcatcggatggttcttcaagaagaaaccgtccgtccagtgttttggatgattgcgctcca
ggctcccatgacgtcggagacccgtccactacgaacttgtatcttggaaacatcaatcca
cagatgaacgaggagatgctttgtcaagagtttggccgctacggtccattggccagtgtg
aaaatcatgtggccaaggacagacgaggagagggctcgggagaggaactgtggctttgtg
gctttcatgaacaggagggatgctgagcgagcactcaagaacctaaatggaaagatgata
atgaactttgagatgaaattaggatggggcaaaggtgtgcctattccacctcatcccatc
tacatccctccttccatgatggagcatacactcccaccgcctccctctggcctacccttc
aacgcacagccacgggagaggctaaaaaaccccaatgctcccctgcttcctccacccaaa
aacaaggaggagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaaca
gaaaggaatttgctctctctcatccaccgaatgatcgagtttgtggtgcgtgaaggccca
atgtttgaagccatgatcatgaacagagaaatcaacaatcccatgtacagatttttattt
gagaaccagagtccagcacatgtatactacagatggaagctctactccatactacagggt
gaagcaccagttaaatggagaacggacgactttaggatgtttaaaaatggctctctatgg
cgcccacctcctcttaatccatacctccacggtccttatgatgatggagaggaggaggaa
gaagaggaggaatccagcaagaaaggctgcttgaaagaggatgagcgggacaaactggag
gagatgctgcgtggtttgactcccaggaggggagacatcgctgaagccatgctgttctgt
ctcagccacgccgaagctgctgaagagatagtggagtgtatcacagagtccctctccatc
cttaagacccctctacccaaaaagattgcacggttatatttagtttctgatgtgctgtat
aactcttcagccaaagtgtccaatgcatcatactacagaaaatattttgagacgaagctc
tgtcagattttcgcagacctcaacgccacatacaaaacgatacagggtcaccttcagtct
gagaactttaagcaacgggtgatgtcgtgtttccgggcgtgggaggactgggccgtgtat
ccggacccctacctcatcaagctccagaacatcttcctgggtctagttaatctcacggtg
gagaaggagcccgtgaccctcgtcgttgaggctgagccgacagaagacatcgacggggct
cctataggtgagtttgtggataacactctgctggaggacgtggacggggtgccgatcgac
gcagggcccatggacggggcaccgatcgatggagcaccactggacgacctggatggagta
ccaatcaagcaactggaagaagacatcgacgggataccttttgatcagtctaaggaaaca
gccttcaaggtggcgccctcaaaatgggaagcagtggaggagtccgagctacaggctcaa
gctgtgacaacctcaaaatgggaaatctttgagcagccggaagaaacgaaaaagaatgag
gaggacagcgatgacgatgacaggacgccgcgctcagaggataatcagagctactccaac
cccatcagagaggactcggatactaaggccaagacgtccgaaatgaacgaggagaagcgc
atcaagctgagagagatagaggttaaagtcatgaagttccaggatgagctagaatctggg
aaaagaccaaagaagcccggccagagtattcaggagcaggtggagcactacagggacaaa
ctactacaaaaggaaaaggaaaaagagaaacttgaacgggaaaaggagaaggagaagaaa
gaaaaggagaaagcggaggcacggttgaaggagctgaagaaggaaaaggagaaggaggac
acgccgaccagaaaagagagacgtttgtcccctccggttgataggaagcggcgtcacagc
ggttcgcccagtccgacgcggagcagcagcagacgaggccggtcgtcctcgccccgttcg
gagcgctccgaaagatcggaacgctccgaccggtcgtactcgaaagacaccacttcacgc
tcttcccataaagactcaccacgatccagcaacaaaaagtcatccaaaagatctccctca
ttgcctcgcacacctaaacgatccagaaggtcacgctccaggacacccaagaaatcaact
aaaaagtcccgctccaaatcaagatctccacaccgatctcacaaaaaatcaaagaagagt
aaacactga

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