Morococcus cerebrosus: MON37_00395
Help
Entry
MON37_00395 CDS
T08033
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mcer
Morococcus cerebrosus
Pathway
mcer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MON37_00395 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcer03021
]
MON37_00395 (rpoB)
03400 DNA repair and recombination proteins [BR:
mcer03400
]
MON37_00395 (rpoB)
Enzymes [BR:
mcer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MON37_00395 (rpoB)
Transcription machinery [BR:
mcer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MON37_00395 (rpoB)
DNA repair and recombination proteins [BR:
mcer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MON37_00395 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
SopD
Motif
Other DBs
NCBI-ProteinID:
UNV87455
LinkDB
All DBs
Position
81402..85580
Genome browser
AA seq
1392 aa
AA seq
DB search
MNYSFTEKKRIRKSFAKRENVLDVPFLLATQIDSYAKFLQLENAFDQRTDDGLQAAFNSI
FPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRARIRLVILDKEASKPTVKE
VRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSENG
VQTDLVVGRLKGETAKVDILDKEGNVLVAKGKRITAKNIRDISNAGLTRLDVEPESLIGK
ALAADLIDPETGEVLAVANDEITEELLAKFDIHGVKQLTTLYINELDQGGYISNTLRTDE
TADQQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQKLS
EVQQQSWYGRLLNETFAGAAEKGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNRRV
RSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLSQ
FMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIN
SLSVYARTNDYGFLETPYRRVIDGKVTEEIDYLSAIEEGRYVIAQANADLDKDGNLIGDL
VTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCL
RPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNL
VKFTRSNQSTNINQRPAVKAGDVLQRGDLIADGASTDLGELALGQNMTIAFMPWNGYNYE
DSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYI
GAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQV
FTREGIQRDKRAQSIIDSELKRYRQDLGDQLRIFDNDAFDRIERMIVGQKANGGPMKLAK
GSEITTEYLAGLPSKHDWFDIRLADEDLAKQLELIKLSLQQKREEADELYEIKKKKLTQG
DELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLN
PLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKASELREFLNKLYNGSGKKEDLD
ALTDEEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQI
TLYDGRSGEPFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
GEMEVWALEAYGAAYTLQEMLTVKSDDVTGRTKMYENIVKGEHKIDAGMPESFNVLVKEI
RSLGLDIDLERY
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgaactattcgtttaccgagaaaaaacgtatccgtaagagttttgcaaaacgagagaac
gtattggacgttccctttttgttggcaacacaaattgattcttatgcgaaatttctgcaa
ttagaaaatgcttttgatcagcgcactgacgatggtctgcaggcagcatttaattctatt
ttccctattgtaagccacaatggttatgcgcgtctggagtttgtgcattacacgttgggt
gagcctttgttcgatattcctgaatgtcaattgcgcggaatcacttatgcagcccctttg
cgcgcgcgtatccgactggttattttagacaaggaagcgtctaaaccgacagtcaaagaa
gttcgtgaaaatgaagtgtacatgggcgaaatcccattgatgactccaagtggttcgttt
gtcattaacggtaccgaacgtgtaattgtttctcagttgcaccgttctcccggtgtgttt
tttgagcatgaccgcggcaagacccattcctccggtaaattgttgttctctgctcgaatc
attccttaccgtggttcatggttggatttcgaatttgacccgaaagatttgttgtatttc
cgtatcgaccgtcgccgtaagatgccggttacgattttgttgaaggctttgggctacaac
aatgagcagatcttggatattttctacgataaagaaacgttctatctgtctgaaaatggt
gttcaaaccgatttggttgtaggtcgtctgaaaggtgaaactgccaaagttgatatcttg
gataaagaaggcaacgtattggttgctaaaggtaaacgcattaccgcaaaaaatatccgt
gatattagcaatgcgggattaacccgtttggatgtggagccggaaagcctgattggcaaa
gctttggccgcggatttgattgaccctgaaacgggtgaagtattggctgtagccaacgat
gaaatcactgaagaattattggcaaaatttgatattcatggtgtaaaacaacttactacg
ctttacattaatgaattggatcaaggtggctatatttccaatactcttcgtactgatgag
actgctgatcagcaagctgcacgtgttgcgatttaccgcatgatgcgcccgggcgaaccg
cctaccgaagaggctgtcgagcaattgtttaaccgcttgttctttagcgaagacagctac
gatttgtctcgcgtaggccgtatgaaattcaatacgcggacttatgaacaaaaattgtct
gaagtacaacagcagtcttggtatggccgtttgttgaatgaaactttcgcaggtgctgcc
gaaaaaggcggttatgttctgagcgtcgaagatattgtcgcctcaattgctactttggtt
gaattgcgtaacggtcatggcgaagtagacgatattgaccacttgggtaaccgtcgcgtg
cgttcggtaggtgagttaactgaaaaccaattccgcagcggtttggctcgtgtggaacgt
gccgtaaaagaacgcctgaatcaagcggaatcagaaaacttaatgccgcatgatttgatt
aatgcgaaacctgtttctgctgccatcaaagaattcttcggctcaagccagttgagtcag
tttatggaccagaccaatcccttgtctgaagtaacccataaacgccgtgtatctgcgtta
ggcccgggtggtttgacccgtgaacgtgccggtttcgaggtgcgagacgtgcatccgacc
cactatggccgcgtatgtccgattgaaacacctgaaggtccgaacatcggcttgattaac
tcattgtccgtttatgcgcgtaccaatgattatggtttcttggaaactccttaccgccgc
gttatcgacggcaaagtaaccgaggaaatcgattacttgtctgctatcgaagaaggccgc
tatgtgattgcacaggcgaatgctgatttggacaaagacggtaatttgattggtgacttg
gtaacttgtcgtgaaaaaggcgaaaccattatggcaacgcctgatcgtgtccaatatatg
gacgtggcaaccggacaagtggtatctgtagcggcatctctgattcctttcttggaacac
gatgatgcgaaccgtgcattgatgggtgccaacatgcaacgtcaggccgtaccgtgcctg
cgtcctgaaaaaccgatggttggtaccggtatcgaacgttctgttgctgttgactctgct
actgcaatcgttgcccgtcgtggcggtgtagttgagtatgtcgatgccaaccgtgttgtg
attcgtgttcatgacgatgaagcgactgccggtgaagtgggtgtcgatatttacaacttg
gttaaattcactcgttctaaccaatctaccaatatcaaccaacgtcctgccgtcaaagcc
ggcgacgttttgcaacgcggcgatttgattgctgacggtgcatccactgatttgggcgaa
ttggctttgggtcaaaatatgactatcgccttcatgccgtggaacggttataactatgaa
gactcgattctgatttccgaaaaagtagctgcagacgaccgctatacttcgattcacatt
gaggaattgaatgtcgttgcccgcgataccaagctgggtgcggaagatatcacccgcgat
attccgaacttgtccgaacgtatgcaaaaccgtttggatgaatccggtatcgtttatatc
ggtgcggaagtggaagccggcgatgtgttggttggtaaagtaacgcctaaaggcgaaacc
caactgactccggaagaaaaactgttgcgcgccatcttcggcgaaaaagcatccgacgta
aaagacacctctttgcgtatgcctaccggtatgagcggtacggttatcgacgttcaagtc
tttacccgcgaaggtatccaacgcgataaacgtgcccaatccattatcgattccgagctg
aaacgttaccgtcaagacttgggcgaccagttgcgtatttttgataacgacgcattcgac
cgtattgagcgtatgatcgtcggccaaaaagccaacggcggtccgatgaagctggctaaa
ggcagtgaaatcactaccgaatatctggcgggtttgcctagcaaacacgattggttcgat
atccgtttggctgatgaagatttggccaaacaattagaactgattaaattgagtctgcaa
caaaaacgcgaagaagcggacgaattgtacgaaatcaagaagaaaaaactgacccaaggc
gacgaattgcagcctggcgtacaaaaaatggtgaaagtctttatcgccatcaaacgccgt
ctgcaagccggtgacaaaatggcgggccgccacggtaacaaaggtgtggtatcacgcatt
ctgccggtggaagacatgccttacatggcggacggtcgtcctgtggacatcgtactgaac
ccgttgggcgtaccttctcgtatgaacatcggtcagattttggaagttcacttgggttgg
gcggcaaaaggtatcggcgagcgtatcgaccgtatgctgaaagagcaacgcaaagccagc
gagctgcgcgagttcttgaacaaactctacaatggcagcggtaagaaagaagatttggat
gccctgactgatgaagaaatcatcgaactggcttccaatctgcgtaaaggtgcatctttc
gcatcgccggtatttgatggtgcgaaagaatctgaaatccgcgaaatgctaaatttggct
tatccgagcgatgatcctgaagtcgaaaaactgggctttaacgacagcaaaacccaaatc
acactgtatgacggacgctctggcgaaccgtttgaccgcaaggtaacagtaggtgtgatg
cactatctgaaactgcaccacttggttgacgaaaaaatgcacgcgcgttctaccggtccg
tacagtctggttactcagcagcctctgggcggtaaagctcagttcggtggccaacgtttc
ggtgagatggaggtttgggcgctggaagcatacggtgcagcctacacactgcaagagatg
ctgaccgtgaagtccgacgacgtaacaggccgtaccaaaatgtacgagaacatcgtcaaa
ggcgagcacaaaatcgatgccggtatgcctgagtccttcaacgtattggttaaagagatt
cgctcactgggcttggatatcgatttggaacgttactaa
DBGET
integrated database retrieval system
