KEGG   Macaca fascicularis (crab-eating macaque): 101866027
Entry
101866027         CDS       T02918                                 
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
  KO
K10754  replication factor C subunit 1
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03030  DNA replication
mcf03410  Base excision repair
mcf03420  Nucleotide excision repair
mcf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101866027 (RFC1)
   03410 Base excision repair
    101866027 (RFC1)
   03420 Nucleotide excision repair
    101866027 (RFC1)
   03430 Mismatch repair
    101866027 (RFC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcf03032]
    101866027 (RFC1)
   03400 DNA repair and recombination proteins [BR:mcf03400]
    101866027 (RFC1)
DNA replication proteins [BR:mcf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101866027 (RFC1)
DNA repair and recombination proteins [BR:mcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101866027 (RFC1)
SSDB
Motif
Pfam: RFC1 BRCT AAA PTCB-BRCT Rad17 AAA_22 RuvB_N AAA_5 AAA_14 BRCT_2 AAA_16 AAA_33 nSTAND3 AAA_30 AAA_17 AAA_18 RNA_helicase NTPase_1 AAA_7 NPHP3_N Nexin_C AAA_19 AAA_28
Other DBs
NCBI-GeneID: 101866027
NCBI-ProteinID: XP_005554751
Ensembl: ENSMFAG00000041957
LinkDB
Position
5:complement(join(38576467..38576550,38577565..38577756,38579364..38579577,38581985..38582130,38584677..38584794,38584903..38585057,38586910..38587008,38587132..38587227,38587366..38587503,38587683..38587774,38589441..38589555,38591218..38591330,38593508..38593904,38596327..38596431,38597631..38597810,38601771..38601878,38604915..38605201,38605818..38605905,38607923..38608000,38611076..38611153,38612044..38612276,38628063..38628185,38631081..38631156,38637602..38637730,38653087..38653089))
AA seq 1148 aa
MDIRKFFGVIPSGKKLVTETVKQNEKTKSDEETLKAKKGIKEIKVNSSRKEDDFKQKQPS
KKKRIIYDSDSESEETLQVKNAKKQPEKPPVSSKPGKISRQDPVTYISETDEEDDFMCKK
AASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSKKK
MVASKRKELSQNTNESGLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
ARKDTEEGETFSSVQANLNKAEKRKYPHKVKTEQFSDERKSYSPRKQTKYESSKEPQQHS
KSSADKIGEVSSPKASSKLAIMKRKEESAYKETESVASKRKENAVELKGETKTPKKTKSS
PAKKESISPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
TMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSKPTSKRDSLAK
TIKKETDVFWRGLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIG
QQGDQSCANKLLRWLRNWHKSSSEDKKHAAKFGKFSGKDDGSSFKAALLSGPPGVGKTTT
ASLVCQELGYSYVELNASDTRSKSSLKAIVAESLSNTSIKGFYSNGAASSVSTKHALIMD
EVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
KGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRA
KKDIKMGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGD
MKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGFMTQFPTFP
SWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHLRDALVQPLTLQGVDGVQD
VVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAI
KASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKPSKPSKPEKDKEPRK
GKGKSSKK
NT seq 3447 nt   +upstreamnt  +downstreamnt
atggacattcggaaattctttggagtaataccaagtggaaagaaacttgtaactgaaaca
gtaaagcagaatgagaaaacaaagtctgatgaagaaactttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagctcccgtaaagaggatgacttcaaacagaaacaaccaagc
aagaaaaagaggatcatctatgattcagattcagagtcagaggagacgttgcaggtaaaa
aatgccaaaaagcaaccagaaaaaccgccagtatcttctaaacctggtaaaatttcacgg
caggatcctgttacatacatttcagaaacagatgaagaagatgactttatgtgtaagaag
gcggcctctaaatcaaaagagaatggaagatctacaaatagtcatcttggaacatcaaac
atgaaaaagaatgaagaaaacactaagaccaagaataagcctttatcaccaataaaactt
acacccacatcagtgcttgattattttggaactggaagtgtccaaagatctaaaaagaag
atggtggcaagcaaaagaaaagagctttcacaaaatacaaatgagtctggattaaatgat
gaagccatcgccaagcaattacagcttgatgaagatgcggagctggagaggcagttgcat
gaagatgaagagtttgccagaacattagccatgttggatgaagaacccaagaccaaaaag
gctcgaaaggacacagaagagggagaaacattttcatctgtccaagccaatttaaataaa
gcagaaaaacgtaaatatcctcataaagtaaaaacagaacaattttcagatgaaagaaag
agctacagtcctaggaagcaaactaaatatgaaagttcaaaagaacctcagcaacattcc
aagtcatcagctgacaaaataggagaagtctcttctcccaaggccagttctaagctggca
attatgaaaagaaaagaagagagcgcttataaagaaacagagtccgtggcctcaaaaaga
aaagaaaatgccgttgaattgaaaggagagacaaaaactcctaagaaaaccaaaagttct
ccagctaaaaaagagtctataagtcctgaagattctgaaaagaaacgcactaattatcaa
gcttatcgaagctacttaaatcgagaaggtcccaaggctctgggctccaaagaaatacca
aagggagctgaaaattgcttggaaggccttatatttgtaatcacaggcgtgctggagtct
attgaacgagatgaggccaaatctctaattgaacgttatgggggaaaagtaacaggaaat
gtcagcaagaaaacaaattaccttgtcatgggtcgtgatagtggacagtccaagagtgat
aaggccgcagccttggggacaaaaattattgatgaagatggcctgttgaatctgattcga
actatgccaggcaagaaatccaagtacgaaatagcagttgaaactgagatgaagaaagag
tccaaactggagagaacaccccaaaaaaatgttcaaggcaaaagaaaaattagtccatct
aaaaaggaatcggaatctaaaaagagcaagccgacttccaaaagggacagtttggcaaag
acaataaaaaaggaaacagatgtgttttggagaggcctggatttcaaggagcaggtggcc
gaggaaacaagtggtgacagcaaggctaggaatttggctgatgacagcagtgaaaacaaa
gtggaaaatttgctctgggtggataaatataagccaacctcactcaagaccataattgga
cagcaaggtgaccagagctgtgccaacaaactcctacgctggctccgaaactggcacaag
agttcttctgaagataaaaaacacgcagcaaagtttggtaaattttccggcaaagatgat
ggctctagttttaaagcagcgttgctgtcaggccctcctggtgttggcaaaaccaccaca
gcttccctggtgtgtcaggaattgggatacagctacgtggaactgaatgcaagtgacacc
cggagtaagagcagtttgaaggcgattgttgctgagtcactgagcaataccagcatcaaa
ggcttttattcaaatggagcagcctcttcagtaagcacgaaacatgctctcatcatggat
gaagtagatggcatggcaggcaatgaggataggggaggaattcaggaattaattggcctg
ataaaacatactaaaattcccattatttgtatgtgcaatgatagaaatcatcccaagatt
cgctctctggttcattattgttttgatcttcgttttcaaagacctcgggttgaacagatt
aagggtgctatgatgtctattgcatttaaagaaggtttaaagattccccctccagcaatg
aatgaaataattttgggagccaatcaagatatcagacaggttttacataatctgagtatg
tggtgtgcacgaagtaaagcattaacctatgaccaggccaaagctgattctcacagagcc
aaaaaggatatcaaaatgggcccatttgatgttgcccggaaggtgtttgcagctggagag
gagactgctcacatgtcacttatggacaagtcagatctcttttttcatgattattcaata
gcacccctctttgtccaggaaaattacatacatgtgaagcctgtagcagcagggggcgac
atgaaaaagcacttgatgcttttaagcagagcagcagacagcatatgtgatggtgactta
gtggacagccagatccggagtaagcaaaactggagtcttctgcctacgcaggccatttat
gccagtgttcttcctggagagttgatgagagggttcatgacccagtttcccaccttcccg
agctggctggggaagcactcgtctacaggcaaacacgatcgtattgttcaggacctggcc
ttgcatatgagtctcagaacttactccagcaaaaggactgtaaacatggattatctgtca
catctaagggatgcacttgtacagcccttgaccttacaaggagtcgacggggtacaggat
gttgttgcacttatggacacatattatttgatgaaagaagactttgagaatatcatggaa
attagcagctggggtggcaaacctagtcccttttcaaagctggatcccaaggtgaaagca
gccttcacaagagcttacaataaggaagcccaccttactccatattcacttcaagctata
aaggcatctagacacagcacaagcccatccctggattcggaatacaatgaagagttaaat
gaagatgactctcaatctgatgagaaagaccaagatgctatagaaactgatgccatgatc
aagaaaaagacaaaaccttcaaagccttcaaaaccagaaaaagataaggagcccagaaaa
ggaaaaggaaaaagttcgaagaaatga

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