KEGG   Macaca fascicularis (crab-eating macaque): 101866799
Entry
101866799         CDS       T02918                                 
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6 isoform X1
  KO
K12855  pre-mRNA-processing factor 6
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101866799 (PRPF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcf03041]
    101866799 (PRPF6)
Spliceosome [BR:mcf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    101866799 (PRPF6)
 Complex C
   U5 SnRNP specific factors
    101866799 (PRPF6)
SSDB
Motif
Pfam: PRP1_N TPR_14 TPR_19 HAT_PRP39_N Suf HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C TPR_16 TPR_17 TPR_2 TPR_8 ARM_TT21_2nd TPR_1 TPR_CcmH_CycH ARM_TT21_C T7SS_EccA1_N ChAPs ARM_TT21_5th
Other DBs
NCBI-GeneID: 101866799
NCBI-ProteinID: XP_005569690
Ensembl: ENSMFAG00000037542
LinkDB
Position
10:join(120118641..120118711,120120407..120120575,120122410..120122528,120133680..120133758,120135170..120135346,120135887..120136042,120138202..120138296,120138754..120138910,120140524..120140686,120149152..120149270,120150621..120150839,120155196..120155318,120160990..120161111,120163455..120163593,120164880..120164999,120166047..120166223,120166648..120166781,120167521..120167612,120168651..120168765,120171353..120171479,120172251..120172403)
AA seq 941 aa
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYER
ARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEE
QKEMMENAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHD
PHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CESAEPRHGELWCAVSKDIANWQKKIGDILRLVAGRIKNTF
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgaacaagaagaagaagccgttcctggggatgcccgctccgctcggctacgtgccgggg
ctgggccggggcgccactggcttcaccacacggtcagacatcgggcccgcccgtgatgca
aatgatcccgtggatgatcgccacgcacccccaggcaagagaactgttggggaccagatg
aagaaaaaccaggctgctgacgatgacgatgaggatctaaatgacaccaattacgacgag
tttaatggctacgctgggagcctcttctcaagcgggccctatgagaaagatgacgaggaa
gcggatgccatctatgcagccctggataaaaggatggatgaaagaagaaaagaaagacgg
gagcaaagggagaaagaagaaatagagaaatatcgtatggagcgccccaaaatccaacag
cagttctcagatctcaaaaggaagttggcggaagtcacagaagaagagtggctgagcatc
cctgaggttggcgatgccagaaacaagcgccagcggaacccacgctatgagaagctgacc
ccggttcctgacagcttctttgccaaacatttacagaccggagagaaccatacctcagtg
gatccccgacagactcaatttggaggtcttaacacaccctatccaggtggactaaacact
ccatacccaggtggaatgacaccaggattgatgacacctggcaccggtgagctggacatg
aggaagattggccaagccaggaacactctgatggacatgaggctgagccaggtgtctgac
tccgtgagtggacagaccgtcgttgaccccaaaggctacctgacggatttaaattccatg
atcccgacacacggaggggacatcaatgatatcaagaaggcacgactgctcctcaagtct
gttcgggagacgaaccctcatcacccgccagcctggattgcgtcagcccgcctggaagaa
gtcactgggaagctacaagtagctcggaaccttatcatgaaggggacagagatgtgcccc
aagagtgaagatgtctggctggaagcagccaggttgcagcctggggacacagccaaggcc
gtggtagcccaagctgtccgtcatctcccacagtctgtcaggatttacatcagagcagca
gagctggaaacagacattcgcgcaaagaagcgggttcttcggaaagccctcgagcatgtt
ccaaactcggttcgcttgtggaaagcagctgttgagctggaagagcctgaagatgccaga
atcatgctgagtcgggctgtggagtgctgccccaccagtgtggagctctggcttgctctg
gcaaggctggagacctatgaaaatgcccgcaaggtcttgaacaaggcgcgagagaacatt
cctacagaccggcacatctggatcacggccgctaagctggaggaagccaatgggaacaca
cagatggtggagaagatcattgaccgagccatcacctcgctgcgggccaacggtgtggag
atcaaccgcgagcagtggatccaggatgccgaggaatgtgacagggctgggagtgtggcc
acctgccaggctgtcatgcgtgccgtgattgggattgggattgaggaggaagatcggaag
cacacctggatggaggatgccgacagttgtgtagcccacaatgccctggagtgtgcacga
gccatctacgcctacgccctgcaggtgtttcccagcaagaagagtgtgtggctgcgtgcc
gcgtacttcgagaagaaccatggcactcgggagtccctggaagccctcctacagagggct
gtggcccactgccccaaagcggaggtgctgtggctcatgggcgccaagtccaagtggctg
gcaggggatgtgcccgcagcaaggagcatcctggctctggccttccaggccaaccccaac
agcgaggagatctggctggcggccgtgaagctggagtccgagaatgatgagtacgagcgg
gcccggaggctgctggccaaggcgcggagcagcgcccccaccgcccgggtgttcatgaag
tctgtgaagctggagtgggtgcaagacaacatcagggcagcccaggatctgtgcgaggag
gccctgcggcactatgaggacttccccaagctgtggatgatgaaggggcagatcgaggag
cagaaggagatgatggagaacgcgcgggaagcctataaccaggggttgaagaagtgtccc
cactccacacccctgtggcttttgctctctcggctggaggagaagattgggcagctaact
cgagcccgggccattttggaaaagtctcgtctgaagaacccaaagaaccctgggctgtgg
ctggagtccgtgcggctggagtaccgtgcagggctgaagaacatcgcaaatacgctcatg
gccaaggcgctgcaggagtgccctaactctggtatcctgtggtctgaggccatcttcctc
gaggcgaggccccagaggaggaccaagagcgtggatgccctgaagaagtgtgagcatgac
cctcatgtgctcctggccgtggccaagctgttctggagtcagcggaagatcaccaaggcc
agggagtggttccaccgcactgtgaagattgactcggacctgggggatgcctgggccttc
ttctacaagtttgagctgcagcatggcactgaggagcagcaggaggaggtgcggaagcgc
tgcgagagcgcagagccgcggcacggcgagctgtggtgtgccgtgtccaaggacatcgcc
aactggcagaagaagatcggggacatcctgaggctggtggccggccgcatcaagaacacc
ttctga

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