KEGG   Macaca fascicularis (crab-eating macaque): 101925570
Entry
101925570         CDS       T02918                                 
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X6
  KO
K04833  voltage-gated sodium channel type I alpha
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf04728  Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09150 Organismal Systems
  09156 Nervous system
   04728 Dopaminergic synapse
    101925570 (SCN1A)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mcf04040]
    101925570 (SCN1A)
Ion channels [BR:mcf04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   101925570 (SCN1A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl IQ_SCN5A_C PKD_channel GPHH ATP-synt_B IQ Neur_chan_memb New_glue FUT8_N_cat PFF1_TM
Other DBs
NCBI-GeneID: 101925570
NCBI-ProteinID: XP_073865482
Ensembl: ENSMFAG00000031169
LinkDB
Position
12:complement(join(61551196..61552370,61554098..61554368,61555933..61556037,61557960..61558097,61559630..61559683,61562461..61562742,61569700..61569822,61572220..61572393,61580042..61580196,61581906..61582026,61601869..61602351,61603517..61603873,61605334..61605507,61607465..61607703,61608523..61608655,61609995..61610291,61611290..61611571,61613038..61613244,61613899..61614040,61615161..61615224,61618715..61618984,61619847..61619938,61621641..61621769,61623384..61623471,61625539..61625659,61639914..61640177))
AA seq 1979 aa
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCIQWPPTNASLEEHSVEKNITVNY
NGTLINETVFEFDWKSYIQDSRYHYFLEGFLDALLCGNSSDAGQCPEGYVCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMIEQLKKQQEAAQAATATASEHSREPSAAGRLSD
SSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFRFSIEGN
RLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFEDN
ESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLGTTTETEM
RKRRSSSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESRQKCPPCWYKFSNIFLIWD
CSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNNVLTVGNLVFTG
IFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKL
AKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIASDCQL
PRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLA
LLLSSFSADNLAATDDDNEMNNLQIAVDRMHKGVAYVKRKIYEFIQQSFIRKQKILDEIK
PLDDLNNKKDSCMSNHTTEIGKDLDYLKDVNGTTSGIGTGSSVEKYIIDESDYMSFINNP
SLTVTVPIAVGESDFENLNTEDFSSESDLEESKEKLNESSSSSEGSTVDIGAPAEEQPVV
EPEETLEPEACFTEGCVQRFKCCQINVEEGRGKQWWNLRRTCFRIVEHNWFETFIVFMIL
LSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDF
LIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMN
VLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTGDRFDIEDVNNHTDCLKLIERNETARWK
NVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEESLYMYLYFVIFIIF
GSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNK
FQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSEYVTTILSRINLVFIVLFTGECV
LKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRL
IKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFET
FGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKVNPGSSVKGDCGNPSVGIFFFVSY
IIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLS
QFAAALEPPLNLPQPNKLQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQM
EERFMASNPSKVSYQPITTTLKRKQEEVSAVIIQRAYRRHLLKRTVKQASFTYNKNKIKG
GANLIKEDMIIDRINENSITEKTDLTMSTAACPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq 5940 nt   +upstreamnt  +downstreamnt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgcggctattgaaagacgcattgcagaagaaaaggctaagaatcccaaaccagac
aaaaaagatgacgatgaaaatggcccaaagccaaatagtgacttggaagctggaaagaac
cttccatttatttatggagacattcctccagagatggtgtcagagcccctggaggacctg
gacccctactatatcaataagaaaacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaata
gctattaagattttggtacattcattattcagcatgctaattatgtgcactattttgaca
aactgtgtgtttatgacaatgagtaaccctcctgactggacaaagaatgtagaatacacc
ttcacaggaatatatacttttgaatcacttataaaaattattgcaaggggattctgttta
gaagattttactttccttcgggatccatggaactggctcgatttcactgtcattacattt
gcgtacgtcacagagtttgtggacctgggcaatgtctcggcattgagaacattcagagtt
ctccgagcattgaagacaatttcagtcattccaggcctgaaaaccattgtgggagccctg
atccagtctgtgaagaaactctctgatgtcatgatcctcactgtgttctgtctgagcgtg
tttgctctaattgggctgcagctgttcatgggcaacctgaggaataaatgtatacagtgg
cctcccaccaatgcttccctggaggaacatagtgtagaaaagaatataactgtgaattat
aatggtacacttataaatgaaactgtctttgagtttgactggaagtcatatattcaagat
tcaagatatcattatttcctggagggttttttagatgcactactctgtggaaatagctct
gatgcaggccagtgtccagagggatatgtgtgtgtgaaagctggtagaaatcccaattat
ggctacacaagctttgataccttcagttgggcttttttgtccttgtttcgactaatgact
caggacttctgggaaaatctttatcaactgacattacgtgctgctgggaaaacatacatg
atattttttgtgttggtcattttcttgggctcattctacctaataaatttgatcctggct
gtggtggccatggcctatgaggaacagaatcaggccaccttggaagaagcagaacagaaa
gaggccgaatttcagcagatgatcgaacagcttaaaaagcaacaggaggcagctcaggca
gcgacagcaactgcctcagaacattccagagagcccagtgcagcaggcaggctctcagac
agctcatctgaagcctctaagttgagttccaagagtgctaaggaaagaagaaatcggagg
aagaaaagaaaacagaaagagcagtctggtggggaagagaaagatgaggatgaattccat
aaatctgaatctgaggacagcatcaggaggaaaggttttcgcttctccattgaagggaac
cggttgacgtatgaaaagaggtactcttccccacaccagtctttgttgagcatccgtggc
tccctattttcaccaaggcgaaatagcagaacaagccttttcagctttagagggcgagca
aaggatgtgggatctgagaatgactttgcagatgatgagcacagcacctttgaggataat
gagagccgtagagattccttgtttgtgccccgacgacatggagagcgacgcaacagcaac
ctgagtcagaccagtaggtcatcccggatgctggcagtgtttccagcgaatgggaagatg
cacagcactgtggattgcaatggtgtggtttccttgggaacaaccactgaaactgaaatg
agaaagagaaggtcaagttctttccatgtttccatggactttctagaagatccttcccaa
aggcaacgagcaatgagtatagccagcattctaacaaatacagtagaagaacttgaagaa
tccaggcagaaatgcccaccctgttggtataaattttccaacatattcttaatctgggac
tgttctccatattggttaaaagtgaaacatgttgtcaacctggttgtgatggacccattt
gttgacctggccatcaccatctgtattgtcttaaatacccttttcatggccatggagcac
tatccaatgacggaccatttcaataatgtgcttacagtaggaaatttggttttcactggg
atctttacagcagaaatgtttctgaaaattattgccatggatccttactattatttccaa
gaaggctggaatatctttgatggttttattgtgacgcttagcctggtagaacttggactc
gccaatgtggaaggattatctgttctccgttcatttcgattgctgcgagttttcaagttg
gcaaaatcttggccaacgttaaatatgctaataaagattattggcaattccgtgggggct
ctgggaaatttaacccttgtgttggccatcatcgtcttcatttttgccgtggttggcatg
cagctctttggtaaaagctacaaagattgtgtctgcaagatcgccagtgattgtcaactc
ccacgctggcacatgaatgacttcttccactccttcctgattgtgttccgcgtgctgtgt
ggggagtggatagagaccatgtgggactgtatggaggttgctggtcaagccatgtgcctt
actgtcttcatgatggtcatggtgattggaaacctagtggtcctgaatctctttctggcc
ttgcttctgagctcatttagtgcagacaaccttgcagccactgatgatgataatgaaatg
aacaatctccaaattgctgtggataggatgcacaaaggagtagcttatgtgaaaagaaaa
atatatgaatttattcaacagtccttcattaggaaacaaaagattttagatgaaattaaa
ccacttgatgatctaaacaacaagaaagacagttgtatgtccaatcatacaacagaaatt
gggaaagatcttgactatcttaaagatgtaaatggaactacaagcggtataggaactggc
agcagtgttgaaaagtacattattgatgaaagtgattacatgtcattcataaacaatccc
agtcttactgtgactgtaccaattgctgtaggagaatctgactttgaaaatttaaacacg
gaagactttagtagtgaatcggatctggaagaaagcaaagagaaactgaatgaaagcagt
agctcctcagaaggtagcactgtggacatcggcgcacctgcagaagaacagcccgtagtg
gaacctgaagaaacccttgaaccagaagcctgtttcactgaaggctgtgtacaaagattc
aagtgttgtcaaatcaatgtggaagaaggcagaggaaaacaatggtggaacctgagaagg
acgtgtttccgaatagttgaacataactggtttgagaccttcattgttttcatgattctc
cttagtagcggtgctctggcatttgaagatatatatattgatcagcgaaagacgattaag
acaatgttggaatatgctgacaaggttttcacttacattttcattctggaaatgcttcta
aaatgggtggcatatggctatcaaacatatttcaccaatgcctggtgttggctggacttc
ttaattgttgatgtttcactggtcagtttaacagcaaatgccttgggttactcagaactt
ggagccatcaaatctctcaggacactaagagctctgagacctctaagagccttatctcga
tttgaagggatgagggtggttgtgaatgcccttttaggagcaattccatccatcatgaat
gtgcttctggtttgtcttatattctggctaattttcagcatcatgggcgtaaatttgttt
gctggcaaattctaccactgtattaacaccacaactggtgacaggtttgacatcgaagac
gtgaataatcatactgattgcctaaaactaatagaaagaaatgagactgctcgatggaaa
aatgtgaaagtaaactttgataatgtaggatttgggtatctctctttgcttcaagttgcc
acatttaaaggatggatggatataatgtatgcagcagttgattccagaaatgtggaactc
cagcctaagtatgaagaaagtctgtacatgtatctttactttgttattttcatcatcttt
gggtccttcttcaccttgaacctgtttattggtgtcatcatagataatttcaaccagcag
aaaaagaagtttggaggtcaagacatctttatgacagaagaacagaagaaatactataat
gcaatgaaaaaattaggatcgaaaaaaccgcaaaagcctatacctcgaccaggaaacaaa
tttcaaggaatggtctttgacttcgtaaccagacaagtttttgacataagcatcatgatt
ctcatctgtcttaacatggtcacaatgatggtggaaacagatgaccagagtgaatatgtg
actaccattttgtcacgaatcaatctggtgttcattgtgctgtttactggagagtgtgta
ctgaagctcatctctctacgccattattactttaccattggctggaatatttttgatttt
gtggttgtcattctctccattgtaggtatgtttctggccgagctgatagaaaagtatttc
gtgtcccctaccctgttccgagtgatccgtcttgccaggatcggccgaatcctacgtctg
atcaaaggagcaaaggggatccgcacgctgctctttgctttgatgatgtcccttcctgcg
ttatttaacatcggcctcctgctcttcctggtcatgttcatctacgccatctttgggatg
tccaactttgcctatgttaagagggaagttgggatcgatgacatgttcaactttgagacc
ttcggcaacagcatgatctgcctgttccaaattacaacttctgctggctgggatggattg
ctagcacccattctcaacagtaagccacctgactgtgaccctaataaagttaaccctgga
agctcagttaagggagattgcgggaacccatctgttggaattttcttttttgtcagttac
atcatcatatccttcctggttgtggtgaacatgtacatcgcggtcatcctggagaacttc
agtgttgctactgaagaaagtgcagagcctctgagtgaggatgactttgagatgttctat
gaggtttgggagaagtttgatcccgatgcaactcagttcatggaatttgaaaaattatct
cagtttgcagctgcacttgaaccgcctctcaatctgccacaaccaaacaaactccagctc
attgctatggatttgcccatggtgagtggtgaccggatccactgtcttgatatcttattt
gcttttacaaagcgggttctaggagagagtggagagatggatgctctacgaatacagatg
gaagagcgattcatggcttccaatccttccaaggtctcctatcagccaatcactactact
ttaaaacgaaagcaagaggaagtatctgctgttattattcagcgtgcttacagacgccac
cttttaaagcgaactgtaaaacaagcttcctttacatacaataaaaacaaaatcaaaggt
ggggctaatcttataaaagaagacatgataattgacagaataaatgaaaactctattaca
gaaaaaactgatctgaccatgtccactgcagcttgtccaccttcctatgaccgggtgaca
aagccaattgtggaaaaacatgagcaagaaggcaaagatgaaaaagccaaagggaaataa

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