KEGG   Macaca fascicularis (crab-eating macaque): 101926040
Entry
101926040         CDS       T02918                                 
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X5
  KO
K12821  pre-mRNA-processing factor 40
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101926040 (PRPF40B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcf03041]
    101926040 (PRPF40B)
Spliceosome [BR:mcf03041]
 Complex A
  U1 snRNP components
   U1 related factors
    101926040 (PRPF40B)
 Complex B
    101926040 (PRPF40B)
SSDB
Motif
Pfam: FF WW WW_TCERG1 DUF4936 WW_2 RhoGAP-FF1
Other DBs
NCBI-GeneID: 101926040
NCBI-ProteinID: XP_005570838
Ensembl: ENSMFAG00000035637
LinkDB
Position
11:join(56463912..56463914,56471164..56471244,56472023..56472166,56472482..56472547,56473218..56473245,56473483..56473508,56473641..56473751,56474061..56474181,56474271..56474295,56474520..56474726,56474966..56475089,56475171..56475235,56475733..56475897,56476000..56476108,56476475..56476625,56477348..56477481,56478102..56478216,56478378..56478469,56482518..56482634,56482846..56482983,56483191..56483286,56483539..56483628,56483835..56484009,56484306..56484367,56484476..56484619,56484715..56484807)
AA seq 893 aa
MSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGI
LPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALW
SEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKE
SRWTRPKDLDDLEVLVKQEAAGKQQQQLPQTLQPQPPQPQPDPPPAPPGPTPVPTGLLEP
EPGGSEDCDVSEATQPLEQGFLQQLEEGPSSSGQHQPQQEEEESKPEPERSGLSWSNREK
AKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEE
ARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGDLEVWAVVPERDRKEVYDDVLFFL
AKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKE
DALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWME
LYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTA
FEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLR
QAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLEQTECQHLHTKGRKH
GRKGKKHHRKRSHSPSGSESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGAA
LGGRGSPSSHLLGADHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEQEQD
KDRELRQAELPNRSPGFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgtcggttcccgattctggtccccggcccccagcagcgcctgcccccttcccaccgggg
ccccccatgatgccaccacccttcatgccccctccagggatccccccaccctttcctccg
atggggctaccccccatgagtcagagaccaccagctatcccccccatgccacctggcatc
ctgcccccaatgcttccaccaatgggggcgccaccaccactcacacagataccaggaatg
gtacctccgatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcgacggct
ccgggtgcagacaccgccagctctgctgtggctgggacaggccctccgagggccctatgg
agtgagcatgtggccccagatgggcgcatctactactacaatgctgacgacaagcagtcc
gtgtgggagaagcccagcgtgctcaagtccaaggcagagctgctcctgtcgcaatgtccc
tggaaagagtacaagtcagacacaggcaaaccttactactataacaaccagagtaaagag
tctcgctggacccggcccaaggatctggatgacctagaggttctagtcaaacaagaggct
gcagggaaacagcagcagcagctgccacagacacttcagccacagccgcctcagccacag
cctgaccccccacctgcacctcctggccccaccccagtgcccacaggcctcctggaacct
gagccaggtgggagtgaagattgtgatgtgtcggaggccacccagcccctggaacagggg
ttcctgcagcagctggaggagggccccagcagttctggacagcatcagccacagcaggag
gaggaagaatcaaagccagaaccagagaggtctggcctcagttggagcaaccgggagaag
gcaaagcaggcattcaaggaactgctgagggacaaggctgtcccctccaacgcctcatgg
gaacaggccatgaagatggtggtcaccgacccccgttacagtgccttgcccaaactgagt
gagaaaaagcaggcattcaatgcctacaaggcgcagcgggagaaggaggagaaggaggag
gcccgtctaagggccaaggaggccaagcagaccctgcagcatttcctggagcagcatgaa
cgcatgacctccaccacccgctaccggcgggcagaacagacctttggagacctggaggtc
tgggctgtggtccctgagagggatcgaaaagaggtttatgatgatgtcctcttcttcctg
gccaagaaggagaaggaacaggccaagcaactccggcgccgcaatatccaggccctaaag
agcattctggatgggatgagtagtgtcaacttccaaaccacgtggtcccaggcccagcag
tacctcatggataaccccagctttgctcaggaccatcagctgcagaacatggacaaggaa
gatgcactgatctgttttgaggagcacattcgagctttggagagggaagaggaggaggaa
cgggagcgggcccggcttcgggagcgacgccaacaacgcaagaatcgggaggccttccag
accttcctggatgagctgcatgagacagggcagctgcactctatgtccacctggatggag
ctatatccagcagtcagcactgatgtccgttttgccaacatgctgggccagccgggctcc
acgcctctggacttgttcaagttctatgtggaggagttgaaggcacgattccatgatgaa
aagaagatcattaaggacatccttaaggaccggggcttctgtgtggaggtgaacacggcc
tttgaggacttcgcccacgtcataagctttgacaagagggctgccgcactggacgcaggc
aacatcaagctgaccttcaatagtctgctggagaaagcagaggcacgggagagggagcgg
gagaaggaggaggcacgcaggatgcggcgcagggaagctgcctttcgaagcatgctgagg
caggctgtgcctgctctggagctaggcactgcctgggaagaggtccgtgagcgttttgtg
tgtgactcagcctttgagcagattaccctggagtcggagcggatccggctcttccgggag
ttcctacaggtgctggagcagactgaatgccagcacctccacaccaaaggccgaaagcat
ggcaggaaaggcaagaagcaccatcgcaagcgttcccactcaccctcaggctctgagtca
gaagaagaggagctgcccccaccatctctccggccccccaagcggaggcggcggaacccc
tcagagtcaggctctgagccctcttcctcacttgattcagttgaaagtgggggtgctgcc
cttggaggacggggctccccttcctcccatcttcttggagcagatcatggccttcggaaa
gccaagaaaccaaaaaagaaaactaagaagagaagacacaagtcgaacagtcctgagagt
gagacagaccctgaggagaaagctggcaaggagagcgatgagaaagaacaagaacaggac
aaggacagggagctccggcaggcagagctccctaaccgttccccaggctttggaatcaag
aaggagaagacaggctgggacacgtcagaaagtgagctgagtgagggtgagctggagagg
cggcggcggacactcctacagcagctggacgatcaccagtga

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