Entry |
|
Symbol |
ERCC4
|
Name |
(RefSeq) DNA repair endonuclease XPF isoform X1
|
KO |
K10848 | DNA excision repair protein ERCC-4 [EC:3.1.-.-] |
|
Organism |
mcf Macaca fascicularis (crab-eating macaque)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:mcf00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101926259 (ERCC4)
03460 Fanconi anemia pathway
101926259 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:mcf03032]
101926259 (ERCC4)
03400 DNA repair and recombination proteins [BR:mcf03400]
101926259 (ERCC4)
DNA replication proteins [BR:mcf03032]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101926259 (ERCC4)
DNA repair and recombination proteins [BR:mcf03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
101926259 (ERCC4)
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
20:join(14615145..14615351,14617001..14617181,14621530..14621725,14623000..14623207,14625687..14625867,14626854..14626982,14628866..14628976,14629829..14630426,14632465..14632557,14639512..14639624,14642381..14643114)
|
AA seq |
916 aa
MEPELPARRTAMAPLLEYERQLVLELLDTDGLVVCARGLGADRLLYHFLRLHCHPACLVL
VLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLT
DRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVER
VMRNLFVRKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKEL
KCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ
YDCVTFLNLLESLRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDAKMSKKGKISEK
MEIKEGQEAKKELVLESNPKWEALTEVLKEIEAENKESEALGGPGQVLICASDDRTCSQL
RDYITLGAEAFLLRLYRKTFEKDSKAEEVWMKFRKEDSSKRIRKSHKRPKDPQNKERASA
KERTLKKKKRKLTLTQMVGKPEELREEGDVEEGYCREISSSPESCLEEIKHEEFDVNLSS
DAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPG
KPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLVRGT
ASTDVSTDTRKAGGQEQNGTQQSVVVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTP
EMCVERKSISDLIGSLNNGRLYSQCVSMSRYYKRPVLLIEFDPSKPFSLTARGALFQEIS
SNDISSKLTLLTLHFPRLRILWCPSPHATAELFEELKQNKPQPDAATALAITADSETLPE
SEKYNAGPQDFLLKMPGVNAKNCRSLMHHVKNIAELATLSQDKLTSILGNAANAKQLYDF
IHTSYAEVVSKGKGKK |
NT seq |
2751 nt +upstreamnt +downstreamnt
atggagccggagctgccggctcgacggacggctatggcgccactgttggagtacgagcgg
cagctggtgctggaactgctcgacactgacgggctggtagtgtgcgcgcgcgggctcggc
gcggaccggctcctctaccactttctccggctgcactgccacccagcctgcctggtgctg
gtgctcaacacgcagccggccgaggaggagtattttatcaatcagctgaagatagaagga
gttgaacacctccctcgccgtgtaacaaatgaaatcacaagcaacagtcgctatgaagtt
tacacacaaggtggtgttatatttgcaacaagtaggatacttgtggttgacttcttgact
gataggataccttcagatttaattactggcatcttggtgtatagagcccacagaataatc
gagtcttgtcaagaagcattcatcttgcgcctctttcgccagaaaaacaaacgtggtttt
attaaagctttcacagacaatgctgttgcctttgatactggtttttgtcatgtggaaaga
gtgatgagaaatctttttgtgaggaaactgtatctgtggccaaggttccatgtagcagta
aactcatttttagaacagcacaaacccgaagttgtagaaatccatgtttctatgacacct
gccatgcttgctatacagactgctatactggacattttaaatgcgtgtctaaaggaacta
aaatgccataacccatcgcttgaagtggaagatttatctttagaaaatgctattggaaag
ccttttgacaagacaatccgccactatctggatcctttgtggcaccagcttggagccaag
actaaatccttagttcaggatttgaagatattacgaactttgctgcagtatctctctcag
tatgattgtgtcacatttcttaatctcctggaatctctgagagcaacggaaaaagctttt
ggtcagaattcaggttggctgtttcttgactccagcacctcgatgtttataaatgctcga
gcaagggtttatcatcttccagatgccaaaatgagtaaaaaaggcaaaatatctgaaaaa
atggaaattaaagaagggcaagaagcaaaaaaggaactggtcctagaaagcaacccaaag
tgggaggcactgactgaagtattaaaagaaattgaggcagaaaataaggagagtgaagct
cttggtggtccaggtcaagtactgatatgtgcaagtgatgaccgaacatgttcccagctg
agagactatatcactcttggagcggaggccttcttattgaggctctacaggaaaaccttt
gagaaggatagcaaagctgaagaagtctggatgaaatttaggaaggaagacagttccaag
agaattaggaaatctcacaaaagacccaaagacccccaaaacaaagaacgggcttctgcc
aaagaaaggaccctcaaaaaaaaaaagcggaagttgaccttaactcaaatggtaggaaaa
cctgaggaactgcgagaggaaggagatgtcgaggaaggatattgtcgagaaataagcagt
agcccagaaagctgcctggaagaaattaagcatgaagaatttgatgtaaatttgtcatcg
gatgctgcttatggaatcctgaaagaacccctcactatcatccatccgcttctgggctgt
agcgacccctatgctctgacaagggtactccatgaagtggaaccaagatacgtggttctt
tatgacgcagagctaacctttgttcggcagcttgaaatttacagggcaagtaggcctggg
aaacctctgagggtttactttcttatatacggaggttcaactgaggaacaacgctatctc
actgctttgcggaaagaaaaggaagcttttgaaaaactcataagggaaaaagcgagcatg
gttgtccctgaagaaagagaaggcagagatgaaacaaacctagacctagtaagaggcaca
gcgtctacagatgtttccactgacactcggaaagccggtggccaggaacagaatggtaca
cagcaaagcgtagttgtggatatgcgtgaatttcgaagtgagctcccatctctgatccat
cgtcggggcattgacattgaacccgtgactttagaggttggagattacatcctcactcca
gaaatgtgtgtggagcgcaagagtatcagtgatttaatcggctctttaaataacggccgc
ctctacagccagtgcgtctccatgtcccgctactacaagcgtcctgtgcttctgatcgag
tttgaccccagcaagcctttctctctcactgcccgcggtgccttgttccaggagatctcc
agcaatgacattagttccaaactcactcttcttacactccacttccccagactacggatt
ctctggtgcccctctcctcatgcaacggcggagttatttgaggagctgaaacaaaataag
ccacagcctgatgcggcgacagcactggccattacagcagattccgaaacccttcccgag
tcagaaaagtacaatgctggtccccaagacttcttgttaaaaatgccaggggtgaatgcc
aaaaactgccgctccttgatgcaccacgttaagaacatcgcagaattagcaaccctgtcg
caagacaagctcacgagtattctggggaatgccgcaaatgccaagcagctttatgatttc
attcacacctcttacgcagaagtcgtatcgaaaggaaaagggaaaaagtga |