KEGG   Macaca fascicularis (crab-eating macaque): 102116233
Entry
102116233         CDS       T02918                                 
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
  KO
K10897  partner and localizer of BRCA2
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03440  Homologous recombination
mcf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102116233 (PALB2)
   03460 Fanconi anemia pathway
    102116233 (PALB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcf03400]
    102116233 (PALB2)
DNA repair and recombination proteins [BR:mcf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     102116233 (PALB2)
   FA (Fanconi anemia) pathway
    Downstream FA components
     102116233 (PALB2)
SSDB
Motif
Pfam: PALB2_WD40 Beta-prop_WDR19_1st zinc_ribbon_16 Microp_apicomplexa_20
Other DBs
NCBI-GeneID: 102116233
NCBI-ProteinID: XP_045238117
Ensembl: ENSMFAG00000003457
UniProt: A0A7N9CJV2
LinkDB
Position
20:complement(join(22672427..22672637,22677028..22677176,22683581..22683668,22690302..22690418,22691922..22692083,22692846..22692931,22695071..22695232,22698028..22698099,22698464..22699290,22703771..22705240,22706716..22706818,22706940..22706999,22710028..22710075))
AA seq 1184 aa
MEEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKIKHSIKKTVEEQDYLSQ
QELSPQLNHSEPKNKICVYDKLHIKTHLDEETGERTSVTLDVGPESFNPGDGPGGLPIHG
TDDTQEHFPHRVSDPDGEQKQKLPGRRKKQQKRTFISQERDCVFGTDSLRLSGKRLKEQE
ETSSKNPTRSPVTEIRTHLLSLKSELPDSPEPVTETNEDSIFIPPTAQPEKGVDTLLRRP
DFTRATTVPLQTPTDSSSSQHLEHIPPKGSSELTTHSLKNIRFTSPVSLEAQGKKVTIPT
DNLVVNKAVSKSGQLPTSSNLEADISCSLNELTHDNLPANENQNLEQNQTEKSLKSPGDA
LDGRNENLQENEILSQPKSLSLEATSLLAAEKHSCTMLEGLLFPAEYYVRTTRSMSNCQR
KVALEAVIQSHLDVKNKGFKNKNKDASKNLNLSNEETDQSEIRMSDTCTGQPSSRTSQKL
LSLTKVSSPAGPTEDNDLSRKAVAQAPSRRYRGKRKSACTPASDHCEPLLPACNPSVINR
SKEEVTSHKYQNKKAVIRVKGKKSHQKEDSLSWSNSAYLSLDDDAFMASFHKDGMLSLKQ
LLSFLSITDFQLPDEDFGPLKLEKLKSCSEKPVEPFESNMFGERRLKEGNCIFPEELSPK
RMDTEMEDLEEDLIVLPGKSHPKRPNPQSQHTKTGLSSSILLYTPLNTVALDDNDRPAAD
MCSPLFPILGTTPAFGPQGSYEKASTEVAGQTCRTPQLAHLKDSVCLASDSKQFDRSSSP
AKPHTTLQVSGRQGQPTCDCDSALPGTPPRIESFTFKVNQLCGNTCQELHKHSIEQTETA
ELPASDSVNPGNLQLISKLKNPSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLWKALD
AWQWEKLYTWHFTEVPVLQIVPVPDVYNLVCVALGNLEIREIRALLCSSDDESEKQVLLK
SGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM
QEALLGTTVMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKES
ESLQSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDQCAAAILTSGTIAIWDL
LLGQCTALLPPISDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS
NT seq 3555 nt   +upstreamnt  +downstreamnt
atggaagagcctcccgggaagcccctcagctgtgaggagaaggaaaagttaaaggagaaa
ttagcattcttgaaaagggaatacagcaagacactagcccgccttcagcgtgcccaaaga
gctgaaaagattaagcattctattaagaaaacagtagaagaacaagattatttgtcccag
caggagctctcaccgcagctaaaccactcagaacctaaaaataaaatatgtgtttatgac
aagttacacatcaaaacccatcttgatgaagaaactggagaaaggacatctgtcacactt
gatgttgggccggagtcctttaaccctggagatggcccaggaggattacctatacacgga
acagatgacacccaagaacattttccccacagggtcagtgaccctgatggtgagcaaaag
cagaagctgccagggagaagaaagaagcagcagaagagaacatttatttcacaagagaga
gactgtgtctttggcactgattcactcagactgtctgggaaaagactaaaggaacaggaa
gaaaccagtagcaaaaatcctactagatcaccagtaactgaaataagaactcacctttta
agtctgaagtctgaacttccagattctccagaaccagttacagaaactaatgaagacagt
atattcattccaccaactgcccaaccagaaaaaggtgtggatacactcctaagaagacct
gatttcaccagggcgactacagttcctttacagactccaacagatagcagtagtagtcag
caccttgaacacattcctcccaaaggcagcagtgaacttactactcacagcctaaaaaac
attagatttacttcacctgtaagtttggaggcgcaaggcaaaaaagtgactatccctaca
gataacctcgttgtaaacaaagctgtaagtaaaagtggccaactgcccacaagttctaat
ttagaggcagatatttcatgttctctaaatgaactcactcacgataacttgccagcaaat
gaaaatcaaaacttagaacaaaatcaaacagagaaatctttaaagtctcccggtgacgct
cttgatggtagaaatgaaaatcttcaggaaaacgagattctaagtcaacctaagagtctt
agcctggaagcaacctctcttcttgctgcagaaaaacattcttgcacaatgcttgaaggc
cttctgtttcctgcagaatactatgttagaacaacacgaagcatgtccaattgccagaga
aaagtagccctggaggctgtcattcagagtcatttggatgtcaagaataaagggtttaaa
aataaaaataaggatgcaagtaaaaatttaaacctttccaatgaggaaactgaccaaagt
gaaattaggatgtctgacacatgcacaggacaaccaagttcaagaacttctcagaaactt
ctctcattaactaaagtcagctctcccgctgggcccactgaagataatgacttgtctagg
aaggcagttgcccaggcacctagtagaagatacagaggaaaaagaaaatcagcctgcacc
ccagcatcagatcattgtgaaccacttttgccagcttgcaacccatcagttattaacagg
tccaaggaggaagtcacctcacataaatatcagaacaaaaaagcagttattcgagtgaaa
gggaagaaaagtcatcaaaaagaggattccctttcttggagtaacagtgcttatttatcc
ttggatgatgatgctttcatggcttcatttcataaggatggaatgctgagcttaaagcaa
ctactgtcttttctcagcatcacagactttcagttacctgatgaagactttggacctctt
aagcttgaaaaactgaagtcttgctcagaaaaaccagtggagccttttgaatcaaacatg
tttggagagagacgtcttaaagagggaaattgtatttttccagaggaactgagtcctaaa
cgcatggatacagaaatggaggacttagaagaggaccttattgttttaccaggaaaatca
catcccaaaaggccaaacccacaaagccagcatacaaagacaggcctttcttcatccata
ttactttatactcctttaaatacagttgcgcttgatgataatgacaggcctgctgcagac
atgtgttcacctcttttccccatcttaggtactactccagcctttggccctcaaggctcc
tatgaaaaagcttccacagaggtcgctggacaaacttgccgcacaccccaacttgctcat
ttgaaagactcagtctgtcttgccagtgatagtaaacaattcgaccgttcaagcagtccg
gcaaaaccacataccaccctgcaggtgtcaggcaggcaaggacaacctacctgtgactgt
gactctgccctgccaggaacacctccacgcattgagtcattcacttttaaagtaaatcag
ctctgtggaaacacatgccaggagttgcataaacattccatcgaacagactgaaacagca
gagcttcctgcttctgatagcgtaaacccaggcaacctacaattgatttcaaagttaaag
aatccttcaggttcctgttccgtagatgtgagtgccatgttttgggaaagagccggttgt
aaagagccatgtatcataactgcttgcgaggacgtagtttctctttggaaagctctggat
gcttggcagtgggaaaaactttatacttggcacttcacagaggttccagtattacagata
gttccagtgcctgatgtgtataatcttgtgtgtgtagctttgggaaatttggaaatcaga
gagatcagggcattgctttgttcctctgatgatgaaagtgaaaagcaagtactactgaag
tctggaaatataaaagctgtgcttggcctgacaaagaggaggctagttagtagcagtggg
accctttctgatcaacaagtagaagtcatgacatttgcagaagatggaggaggcaaagaa
aaccaatttttgatgccccctgaggagactatattaacttttgccgaggtccaagggatg
caagaagctctccttggtactactgttatgaacaacattgttatttggaatttaaaaact
ggtcaactcttgaaaaagatgcacattgatgattcttaccaagcttcagtctgtcacaaa
gcctattctgaaatggggcttctgtttattgtcctgagtcatccctgtgccaaagagagt
gagtcgttgcaaagccctgtgtttcagctgattgtgattaaccctaagacgactctcagt
gtgggtgtgatgctgtactgtcttcctccagggcaggctggcaggttcctggaaggtgac
gtgaaagatcaatgtgcagcagcaatcttgacttctggaacaattgccatttgggactta
cttctcggtcagtgtactgccctcctcccacctatctctgaccaacattggtcttttgtg
aagtggtcaggtacagactctcatttgctggctggacaaaaagatggaaatatatttgta
taccactactcataa

DBGET integrated database retrieval system