Macaca fascicularis (crab-eating macaque): 102116567
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Entry
102116567 CDS
T02918
Symbol
SDC3
Name
(RefSeq) syndecan-3 isoform X1
KO
K16337
syndecan 3
Organism
mcf
Macaca fascicularis (crab-eating macaque)
Pathway
mcf04514
Cell adhesion molecule (CAM) interaction
mcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102116567 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102116567 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mcf00535
]
102116567 (SDC3)
Proteoglycans [BR:
mcf00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
102116567 (SDC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
102116567
NCBI-ProteinID:
XP_005544235
Ensembl:
ENSMFAG00000045826
LinkDB
All DBs
Position
1:join(204109911..204110048,204139653..204139770,204141219..204141832,204143794..204144085,204145005..204145171)
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AA seq
442 aa
AA seq
DB search
MKPGPPHRAGAAHGAGAGTGAAAGPGARGLLLPPLLLLLLAGRAAGAQRWRSENFERPVD
LEGSGDDDSFPDDELDDLYSGSGSGYFEQESGIETAMRFSPDVALAVSTTPAVLPTTNIQ
PVGTPFEELPSERPTPEPATSPLVVTEVPEEPSQRATTISTTTATTAATTTGAPTVATVP
ATVATATPSTPAAPPFTATTAVVRTTGVRRLLPLPLTTVATARATTPEAPSPPTTAAVLD
TEAPTPRLVSTATSRPRALPRPATTQEPDIPERSTLPLGTTAPGPTEVAQTPTPETFLTT
IRDEPEVPVSGGPSGDFELPEEETTQPDTANEVVAVGGAAAKPSSPPGTLPKGARPGPGL
LDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggggccgccgcaccgcgccggggccgcccacggggccggcgccgggaccggg
gccgcggccgggcccggggcccgcgggctgctcctgccaccgctgctgctgctgctcctg
gcggggcgcgccgcgggggcccagcgctggcgcagcgagaactttgagaggcccgtggac
ctggagggctctggggacgatgactcctttcccgatgatgaactggatgacctctactca
gggtcgggctcgggctacttcgagcaggagtcgggcattgagacagccatgcgcttcagc
ccagatgtggccctggcggtgtccaccacccctgcggtgctgcccaccacgaacatccag
cctgtgggcacaccatttgaagagctcccctctgagcgccccaccccagagccagccacc
agccccctggtggtgacagaagtcccggaagagcccagccagagagccaccaccatctcc
actaccacggctaccactgctgccacaacaacgggggccccgactgtggccacagtgcct
gccacagtggccaccgccacccccagcacccctgcagcacccccttttacggccaccact
gctgttgtaaggaccaccggcgtacggaggcttctgcctcttccactgaccacggtagcc
acggcacgggccactacccccgaggcgccctcaccccctaccacggcagctgtcttggac
actgaggccccaacacccaggctggtcagcacagctacctcccggccaagagcccttccc
aggccggccaccacccaggagcctgacatccctgagaggagcaccctgcccctggggacc
actgcccctggacccacagaggtggctcagaccccaactccagagaccttcctgaccaca
atccgggatgagccagaggtgccggtgagtggggggcccagcggagactttgagctgcca
gaagaagagaccacacaaccagacacagccaatgaggtggtagctgtgggaggggctgcg
gccaagccatcatctccacctgggacactgcccaagggtgcccgcccgggccctggcctc
ctggacaatgccatcgactcgggcagctcagctgctcagctgcctcagaagagtatcctg
gagcggaaggaggtgctcgtagctgtgattgtgggcggggtggtgggcgccctctttgcc
gccttcttggtcacactgctcatctatcgcatgaagaaaaaggatgagggcagctacacg
ctggaggaacccaagcaggcgagcgtcacataccagaagcctgacaagcaggaggagttc
tatgcctag
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