KEGG   Macaca fascicularis (crab-eating macaque): 102117132
Entry
102117132         CDS       T02918                                 
Symbol
VPS4A
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03250  Viral life cycle - HIV-1
mcf03272  Virion - Hepatitis viruses
mcf04144  Endocytosis
mcf04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102117132 (VPS4A)
   03272 Virion - Hepatitis viruses
    102117132 (VPS4A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102117132 (VPS4A)
  09143 Cell growth and death
   04217 Necroptosis
    102117132 (VPS4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcf04131]
    102117132 (VPS4A)
   03400 DNA repair and recombination proteins [BR:mcf03400]
    102117132 (VPS4A)
Membrane trafficking [BR:mcf04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    102117132 (VPS4A)
DNA repair and recombination proteins [BR:mcf03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    102117132 (VPS4A)
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 TIP49 AAA_22 AAA_14 AAA_5 AAA_25 RuvB_N IstB_IS21 DUF815 AAA_17 AAA_2 AAA_18 NPHP3_N AAA_33 nSTAND_NTPase5 nSTAND3 RNA_helicase PhoH AAA_24 ResIII AAA_28 Mg_chelatase AAA_7 NACHT YhdB Parvo_NS1 bpMoxR AAA_30 Sigma54_activat
Other DBs
NCBI-GeneID: 102117132
NCBI-ProteinID: XP_005592433
Ensembl: ENSMFAG00000001733
LinkDB
Position
20:join(65416803..65416823,65421892..65422003,65422107..65422254,65424232..65424293,65424399..65424518,65424930..65425086,65425676..65425824,65426213..65426294,65426576..65426795,65428055..65428195,65429708..65429809)
AA seq 437 aa
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
VQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVME
KPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARA
QMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCG
PSRTNPSVMIDDLLTPCSPGDPGAMEMTWMDVPGDKLLEPVVCMSDMLRSLATTRPTVNA
DDLLKVKKFSEDFGQES
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgacaacgtcaaccctccagaaagccattgatctggtgacgaaagccacagaagaggac
aaagccaagaactacgaggaggcgctgcggctgtaccagcatgcggtggagtacttcctc
cacgccatcaagtatgaggcccacagcgacaaggccaaggagagcattcgagccaagtgc
gtgcagtacctagaccgggctgagaagctgaaggattatttacgaagcaaagagaaacac
ggcaagaaaccagtcaaagagaaccagagtgagggcaagggcagtgacagtgacagtgaa
ggggataatccggagaagaagaaactgcaggaacagctgatgggtgccgttgtgatggag
aagcccaacatacggtggaacgacgtggccgggctggagggggccaaggaggccctcaaa
gaagctgtcattttgccaatcaaattcccacacttgttcacaggcaagcgcaccccctgg
cgggggattctgctgttcggaccccctggcacggggaaatcctacttggccaaagctgtg
gcaacagaggccaacaactccaccttcttctctgtgtcctcctcagacctgatgtccaag
tggctgggggagagtgaaaagctggtcaagaacctgtttgagctggccaggcagcacaag
ccctccatcatcttcatcgacgaggtggattccctctgcggatcccgaaatgaaaatgag
agcgaggccgcccggaggatcaaaacggagttcttggtccagatgcagggggtggggaat
aacaatgatgggactctggttcttggagccacgaacataccatgggtgttggattcggcc
atcaggaggaggtttgaaaagcgaatttacatccccttgccggaggaagctgcccgtgcc
cagatgttccggttgcatctggggagcactccccacaacctcacggatgcaaacatccac
gagctggcccggaagaccgaaggctactcgggtgcggacattagcatcatcgtgcgggac
tccctcatgcagcccgtgaggaaggtgcagtcggccacacacttcaaaaaggtctgtggc
ccctcccgcaccaaccccagcgtgatgatcgatgacctcctaaccccatgttcaccaggg
gacccaggagccatggagatgacttggatggatgtccctggggacaaactcttagagcct
gtggtttgcatgtcggacatgctgcggtctctggccaccacccggcccacggtgaatgca
gacgacctcctgaaagtgaagaaattctcagaggactttgggcaggagagttaa

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