Macaca fascicularis (crab-eating macaque): 102118598
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Entry
102118598 CDS
T02918
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mcf
Macaca fascicularis (crab-eating macaque)
Pathway
mcf04151
PI3K-Akt signaling pathway
mcf04510
Focal adhesion
mcf04512
ECM-receptor interaction
mcf04820
Cytoskeleton in muscle cells
mcf04926
Relaxin signaling pathway
mcf04933
AGE-RAGE signaling pathway in diabetic complications
mcf04974
Protein digestion and absorption
mcf05146
Amoebiasis
mcf05165
Human papillomavirus infection
mcf05200
Pathways in cancer
mcf05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102118598 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102118598 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102118598 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102118598 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102118598 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
102118598 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102118598 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
102118598 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102118598 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
102118598 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102118598 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcf04147
]
102118598 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
mcf00536
]
102118598 (COL4A4)
Exosome [BR:
mcf04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102118598 (COL4A4)
Glycosaminoglycan binding proteins [BR:
mcf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102118598 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102118598
NCBI-ProteinID:
XP_005574512
Ensembl:
ENSMFAG00000000619
LinkDB
All DBs
Position
12:complement(112159827..112317070)
Genome browser
AA seq
1692 aa
AA seq
DB search
MSSLHVVLMRRSFRLTKSLATGPWSLILILFSVQYVYGSGKKYVGPCGGRDCSVCHCVPE
KGSRGPPGPPGPQGPIGPLGAPGPTGLSGEKGMRGDRGPPGTAGDKGDKGPTGVPGFPGL
DGIPGHPGPPGPRGKPGKCGYNGSRGDPGLPGGRGALGPGGPPGHPGEKGEKGNSVFILG
AIKGIQGDRGDPGLPGLPGSWGAGGPAGPTGYPGEPGLVGPPGQPGRPGLKGNPGVGVKG
QMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGIPGMIGLPGPPGHKGESGIGAKGE
KGIPGFPGPWGDPGSYGSPGFPGLKGELGLVGDPGPFGFLGPKGDPGDRGHPGPPGVLVT
PPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACAGMIGPPGPQGFPGLPGLPG
EAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSVTYCSVGNPGPQGIKGKVGPPGGR
GSKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGL
PGKPGASGPPGNKGAKGDVVISRVKGHKGERGPDGPPGFPGQPGSHGLDGHAGEKGDPGL
PGDHEDAIAGGKGFPGPLGPPGKAGPVGPPGLGFPGPPGERGHPGVPGCPGVRGPDGLKG
QKGDTVSCNVTYPGRQGPPGFDGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTSEIPGP
PGFRGDIGDPGFGGEKGSSPVGPPGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPG
IKGPRGDPGYPGAEGPAGIPGFPGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQRG
LPGDPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPGPFGDDGLPG
PPGPKGPRGLPGFPGFPGERGKPGAEGCPGTKGEPGEKGMSGFPGDQGVRGAKGAIGPPG
DEGEMAIISKKGKPGEPGPPGDDGFPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGEK
GQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGDPAPA
SHFGPPGPKGEPGSSGCPGHFGASGEQGLPGVQGPRGSPGWPGPPGSSGPPGCPGDRGMP
GLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVG
PPGPVGMPGLKGERGDPGSPGISPPGPCGEKGLPGPPGRSGPPGPAGATGRVPKDIPDPG
PSGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGLPGPPGPPGYKGFPGCD
GKDGQKGPMGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGPPADADDCPRI
PGLPGVPGLRGPEGAMGLPGMRGPPGPGCKGEPGLDGRRGMDGIPGSPGPPGRKGDTGED
GYPGGPGPPGPTGDPGPKGFGAGYLSGFLLVLHSQTDQEPTCPLGMPRLWTGYSLLYLEG
QEKAHNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMMPLSEEA
IRPYVSRCAVCEAPAQAVAVHSQDQSIPPCPQTWRSLWIGYSFLMHTGAGDQGGGQALMS
PGSCLEDFRAAPFLECQGRQGTCHFFANEYSFWLTTVKADLQFSSAPAPDTLKESQAQRQ
KISRCQVCLKYS
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctctgcatgtagtactaatgaggcgctccttcagattgaccaagtcattggcc
acaggtccctggtcacttatactcattctcttttctgtacaatacgtatatgggagtgga
aagaaatacgttggtccttgtggaggaagagattgctctgtttgccactgtgttcctgaa
aaggggtctcggggtccaccaggaccaccggggccacagggtccaattgggcccctggga
gccccaggacccactgggctttcaggagagaaaggaatgagaggggaccgcggccctcct
ggaacagcaggggacaaaggagataagggcccaactggtgttcctggatttccaggttta
gatggcatacctgggcacccagggcctcctggacccagaggcaaacctggtaagtgtggc
tacaatggctcaagaggtgacccagggttgccaggaggaagaggagctcttggtccagga
ggccccccaggccatcctggggaaaagggagaaaaaggaaattcagtgttcattttaggt
gccattaaaggtattcagggagacagaggcgacccaggactgcccggcttaccaggatct
tggggtgcaggaggaccggcgggccccacagggtatcctggagagccagggttagtggga
cctccgggccaaccagggcgtccaggtttgaagggaaatcccggtgtgggagtaaagggg
caaatgggagacccgggtgaggttggtcagcaaggttctcctggacccaccctgttggta
gagccacctgacttttgtctctataaaggagaaaagggtataaaaggaattcctggaatg
attggactgccaggaccaccaggacacaagggagaatctggtattggggcaaaaggagaa
aaaggcattcctggatttccagggccttggggggatcctggttcctacggatctccaggt
ttcccaggattaaagggagaactaggactggttggagatcctgggccatttggatttctt
ggcccaaagggggatcctggagaccgagggcacccaggaccaccaggtgttttggtgact
ccacctcttccactcaaaggcccaccaggggacccaggattccctggccgctatggagaa
acaggggatgttggaccacctggtcccccaggtctcttgggcagaccaggggaagcctgt
gcaggcatgataggaccccctgggccacaaggatttcctggtcttcctgggcttccagga
gaagctggtattcctgggagacctgattctgctccaggaaaaccagggaagccaggatca
cctggcttgcctggagcaccaggcctgcagggcctcccaggatcaagtgtgacatactgt
agtgttgggaaccctggaccacaaggaataaaaggcaaagtgggtcccccaggaggaaga
ggctcaaaaggagaaaaaggaaatgaaggactctgtgcctgtgagcctggtcccatgggc
ccccctggacctccaggacttcccgggaggcaggggagtaagggagacttggggctccct
ggctggcttggaacaaaaggtgacccaggacctcctggtgctgaaggacctccagggcta
ccaggaaagcctggtgcctctggaccacccggcaacaaaggggcgaagggtgacgtggtc
atatcaagagttaaagggcacaaaggagaaagaggtcctgatgggcccccaggatttcca
gggcaaccaggatcgcatggtctggatggacatgctggagaaaaaggggatccaggactc
ccaggggatcatgaagatgcgattgcaggtggtaaaggatttcctggacctctgggtccc
ccaggcaaagcaggacctgtggggcccccgggactgggatttcctggtccaccaggagag
cgaggccacccaggagttccaggctgcccaggtgtgaggggccctgatggcttgaagggt
cagaaaggtgacacagtttcttgcaatgtgacctatcctgggaggcaaggccctccaggt
tttgatggacctccaggtccaaagggatttccaggtccccaaggtgcccctgggctgagt
ggttcagatgggcataaaggcagacctggcacaccaggaacatcggaaataccaggtcca
cctggttttcgtggtgacataggagatccgggttttggaggtgaaaaggggtcctcccct
gttgggcccccaggccctcctgggtcaccaggagtgaatggtcagaaaggaatcccggga
gaccctgcatttggtcacctgggacccccgggaaagaggggtctttcaggagtgccaggg
ataaaaggacccagaggtgatccgggatatccaggtgctgaagggccagctggcattcct
ggattcccaggtctcaaaggtcccaaaggcagagagggacatgctgggtttccaggtgtc
ccaggtccacctggccattcctgtgaaagaggtgctccaggaataccagggcaacgggga
ctccctggggatccaggtagcccaggtgctccaggtgggaaaggacagccgggagatgtg
gggcctcctgggccagctggaatgaaaggtctccctggactcccaggacggcctggggca
cacggtcccccgggcctcccaggaatcccaggtccctttggggatgatgggctacctggt
cctccaggtccaaaaggaccccgggggctgcctggtttcccaggttttcccggagaacga
ggaaagcctggtgcagagggatgtcctggcacaaagggagaacccggagagaagggcatg
tctggctttcccggagaccagggagtgagaggggccaaaggagccataggacctcctgga
gatgaaggagaaatggctatcatttccaaaaagggaaaacccggggaacctggacctcct
ggagatgatggattcccaggagaaagaggtgataaaggaacacccgggatgcaagggaga
agaggagagccgggaagatatggaccacctggatttcacagaggggaacctggtgagaaa
ggtcagccagggcctcctggacccccaggccctccaggctcaactggtctaagagggttc
attggttttccaggacttccaggtgaccagggtgagccaggttctccaggtccccctgga
ttttcaggaatcgatggagcaagaggacctaaaggaaacaaaggtgaccctgcccctgcc
agtcactttggtccacctggtccaaagggtgagccaggtagctctggatgtccagggcat
tttggagcatctggagagcagggcttgcctggcgttcaagggcccagaggatcacctgga
tggccaggaccacctggctcctctggaccaccagggtgcccaggtgatcgggggatgcct
gggctgaggggacagccaggagaaatgggagaccctgggccaagaggcctccagggggat
ccagggataccaggtcctccaggaataaaaggtccctccgggtcacctggcctgaatggc
ttgcatggattgaagggtcagaaaggaaccaaaggtgcttcaggtttgcatgatgtgggg
ccacctggtccagtgggaatgcctgggctaaaaggggagagaggagatcctgggagccca
ggaatctctcctccaggtccctgtggagaaaaaggtctcccaggtcccccagggagatca
ggaccacctggtcctgcaggtgccacaggaagagtgcctaaggacattcctgacccgggt
ccatctggagatcagggacctcctggtcccgatggcccaagaggagcacctgggcctcca
ggcctccctgggagtgttgacctcctgagaggggagccaggtgactgtggtctaccaggg
ccaccaggtctccccggcccaccaggccctccaggatacaaaggctttccaggatgtgat
ggaaaagatggccagaaaggaccaatgggattcccaggaccgcagggaccacatggattt
cctgggccacctggagagaagggtttacctggacctccagggagaaaaggacccactggt
cttccaggtcccagaggtgaaccggggccacctgcagatgcggatgactgtccccgaatc
ccagggcttcctggggtgccaggcctgagaggaccagaaggagccatgggactccctgga
atgagaggccccccaggaccagggtgcaaaggagagcctgggctggatggcaggaggggt
atggatggcattcctgggtctcctgggcctcccggacgtaaaggtgacacaggagaagac
ggctaccccggaggaccagggcctcctggtcccactggggatcctgggcccaaagggttt
ggcgctggatacctcagtggcttcctcctggttctccacagtcagacggaccaggagccc
acctgccccctgggcatgcccaggctctggactgggtatagtctgttatacctggaaggg
caagagaaagctcacaatcaagaccttggtctggcagggtcttgccttcccgtgtttagc
acgctgccctttgcctactgcaacatccaccaggtgtgccactatgcccagagaaacgac
agatcctactggctggccagcgctgcacccctccccatgatgccactctctgaagaggcg
atccgcccctacgtcagccgctgtgcggtatgcgaggccccggcccaggcggtggcggtg
cacagccaggaccagtccatccccccatgtccgcagacctggaggagcctctggattggg
tattcattcctgatgcacacaggagctggggaccaaggaggagggcaggccctcatgtca
ccgggtagctgcctggaagatttcagagcagcaccattccttgaatgccaaggccggcag
ggaacttgccacttttttgcaaatgagtatagcttctggctgacaacagtgaaagcagac
ttgcagttttcctctgctccagcaccagacaccttaaaagaaagccaggcccaacgccag
aaaatcagccggtgccaggtctgcctgaagtatagctag
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integrated database retrieval system
