KEGG   Macaca fascicularis (crab-eating macaque): 102120501
Entry
102120501         CDS       T02918                                 
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X2
  KO
K12821  pre-mRNA-processing factor 40
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102120501 (PRPF40A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcf03041]
    102120501 (PRPF40A)
Spliceosome [BR:mcf03041]
 Complex A
  U1 snRNP components
   U1 related factors
    102120501 (PRPF40A)
 Complex B
    102120501 (PRPF40A)
SSDB
Motif
Pfam: FF WW WW_TCERG1 FF_RHG35_4th WW_2
Other DBs
NCBI-GeneID: 102120501
NCBI-ProteinID: XP_005573254
Ensembl: ENSMFAG00000038480
LinkDB
Position
12:complement(join(48163043..48163135,48164605..48164736,48165656..48165717,48165803..48165899,48166000..48166086,48169328..48169423,48169760..48169897,48170411..48170527,48170631..48170722,48170892..48171006,48177085..48177218,48178161..48178311,48179196..48179304,48180338..48180502,48180850..48180914,48181461..48181569,48184243..48184617,48185292..48185316,48186903..48186956,48187205..48187325,48188783..48188893,48198261..48198277,48200319..48200349,48201798..48201878,48224679..48224810,48225908..48226117))
AA seq 972 aa
MCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMESHPPSQGPGDGERRLSGSSLCSGSWVS
ADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMS
SVMPGMMMSHMSQASMQPALPPGVNSMDVAAGTASGAKSMWTEHKSPDGRTYYYNTETKQ
STWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTI
VAGSLITKSNLHAMIKAEESSKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAA
AAAAAAAAANANASTSTSNTVSGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTST
PAIQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLK
EKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKE
SFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQ
LRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHI
RALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIR
FTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISS
TKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPIELDA
VWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKR
SRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDS
PESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKR
RRTLLEQLDDDQ
NT seq 2919 nt   +upstreamnt  +downstreamnt
atgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatgaggccggggacg
ggagctgaacgtggaggcctcatggtgagtgaaatggagagccatcctccctcgcagggt
cctggggacggggagcggagattgtccggctcaagcctctgctccggctcttgggtctct
gctgacggcttcctgaggagacggccctcgatggggcaccctggcatgcattatgcccca
atgggaatgcaccctatgggtcagagagcgaatatgcctcctgtacctcatggaatgatg
ccacagatgatgccccctatgggagggccaccaatgggacaaatgcctggaatgatgtcg
tcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcctgcctta
ccgccaggagtaaatagtatggatgtagcagcaggtacagcatctggtgcaaaatcaatg
tggactgaacataaatcaccggatggaaggacttattactacaacactgaaaccaaacaa
tctacctgggagaaaccagatgatctcaaaacacctgctgagcaactcttatctaaatgc
ccctggaaggaatacaaatcagattctggaaagccttactattataattctcaaacaaaa
gaatctcgctgggccaaacctaaagaacttgaggatcttgaaggataccagaataccatt
gttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagaaagc
agtaagcaagaagagtgcaccacaacatcaacagccccagtccctacaacagaaattccg
accacaatgagcaccatggctgctgcagaagcagcagctgctgttgttgcagctgcagca
gcagcagcagctgcagcagctgcagccaatgctaatgcttccacttctacttctaatact
gtcagtggaactgttccagttgttcctgagcctgaagttacttccattgttgctactgtt
gtagataatgagaatacagtaactatttcaactgaggaacaagcacaacttactagtacc
cctgctattcaggatcaaagtgtggaagtatccagtaatactggagaagaaacatctaag
caagaaactgtagctgattttactcccaaaaaggaagaggaggagagccaaccagcaaag
aaaacatacacttggaatacaaaggaggaggcaaagcaagcttttaaagaattattgaaa
gaaaagcgggtaccatcaaatgcttcatgggagcaagccatgaaaatgattattaatgat
ccacgatacagtgctttggcaaagttaagtgaaaaaaagcaagcctttaatgcctataaa
gtccagacagaaaaagaagaaaaagaagaagcaagatcaaagtacaaagaggctaaggaa
tcctttcagcgttttcttgaaaatcatgagaaaatgacttctacaaccagatacaaaaaa
gcagagcaaatgtttggagagatggaagtttggaatgcaatatcagaacgtgatcgtctt
gaaatctacgaagatgttttgttctttctttcaaaaaaagaaaaggaacaagcaaagcag
ttgcgaaagagaaattgggaagccttaaaaaacatacttgacaacatggctaatgtaacg
tactctaccacttggtctgaagcccagcagtatctgatggataatccaacttttgcagaa
gatgaggagttacaaaatatggacaaagaagatgcattaatttgctttgaagaacacatt
cgggctttagaaaaggaagaagaagaagaaaaacagaagagtttgctaagagaaaggaga
cgacagcgaaaaaatagggaatctttccagatatttttagatgaattacatgaacatgga
caactacattctatgtcatcttggatggaattgtatccaactattagttctgatattaga
ttcactaatatgcttggtcagcctggatcaactgcacttgatcttttcaagttttatgtt
gaggatcttaaagcacgttatcatgatgagaagaagataataaaagacattctaaaggat
aaagggtttgtagttgaagtaaataccacttttgaagattttgtggcgataatcagttca
actaaaagatcaactacattagatgctggaaatatcaaattggctttcaatagtttacta
gaaaaggcagaagcccgtgaacgcgaaagagaaaaagaagaggctcggaagatgaaacga
aaagagtctgcatttaagagtatgttaaaacaagctgctcccccgatagaattggatgct
gtctgggaagatatccgtgagagatttgtaaaagagccagcatttgaggacataactcta
gaatctgaaagaaaacgaatatttaaagattttatgcatgtgcttgagcatgaatgtcag
catcatcattcaaagaacaagaaacattctaagaaatctaaaaaacatcataggaaacgt
tcccgctctcgatcggggtcagattcagatgatgatgatagccattcaaagaaaaaaaga
caacgatcagagtctcgttctgcttcagaacattcttctagtgcagagtctgagagaagt
tacaaaaagtcaaaaaagcataagaagaaaagtaagaagaggagacataaatctgactct
ccagaatctgatgctgagcgagagaaggataaaaaagaaaaagatcgggaaagtgaaaaa
gacagaactagacaaagatcagaatcaaaacacaaatcgcctaagaaaaagactggaaag
gattctggtaattgggatacttctggcagtgaactgagtgaaggggaattggaaaagcgc
agaagaacccttttggagcaactggatgatgatcaataa

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