KEGG T02918: 102120874

Macaca fascicularis (crab-eating macaque): 102120874

Entry

102120874         CDS       T02918

Symbol

SMARCC2

Name

(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1

K11649

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C

Organism

mcf Macaca fascicularis (crab-eating macaque)

Pathway

mcf03082

ATP-dependent chromatin remodeling

mcf04714

Thermogenesis

mcf05225

Hepatocellular carcinoma

Brite

KEGG Orthology (KO) [BR:mcf00001]
09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102120874 (SMARCC2)
09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    102120874 (SMARCC2)
09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    102120874 (SMARCC2)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcf03021]
    102120874 (SMARCC2)
   03036 Chromosome and associated proteins [BR:mcf03036]
    102120874 (SMARCC2)
Transcription machinery [BR:mcf03021]
Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102120874 (SMARCC2)
Chromosome and associated proteins [BR:mcf03036]
Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    102120874 (SMARCC2)
   PBAF complex
    102120874 (SMARCC2)
   GBAF(ncBAF) complex
    102120874 (SMARCC2)

SSDB

Motif

Pfam:

SWIRM-assoc_2 SWIRM-assoc_3 SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 Chromo

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

11:complement(join(62952102..62952178,62952712..62953140,62953729..62954110,62956397..62956531,62957876..62958042,62958125..62958260,62958493..62958557,62959606..62959767,62960014..62960272,62960955..62961017,62961112..62961231,62961464..62961556,62962233..62962386,62963246..62963359,62966814..62966885,62967196..62967326,62967603..62967640,62967790..62967849,62969332..62969456,62969835..62969950,62970056..62970187,62970356..62970431,62972178..62972247,62972489..62972558,62973469..62973561,62973655..62973736,62974782..62974867,62975801..62975920,62977948..62978058))

AA seq 1245 aa
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKIHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISIN
LPPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQ
SPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ

NT seq 3738 nt +upstreamnt +downstreamnt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctgtggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtccctgtctagcctggttgtacagttactacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcgggaggctccttgtgccacattcttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaat
gtggaaatgtttatgaccatcgagaagtccttggtgcagaataattgcctgtctcgacct
aacatttttctgtgcccagaaattgagcccaaactactagggaaattaaaggacataatc
aagagacaccagggaacagtcactgaggataagaacaatgcctcccatgttgtgtatcct
gtcccggggaatctagaagaagaggaatgggtacgaccagtcatgaagagggataagcag
gttcttctgcactggggctactatcctgacagttatgacacatggatcccagcgagtgaa
attgaagcatctgtggaagatgctccaactcctgagaaacctaggaagattcatgcaaag
tggatcctggacaccgacaccttcaatgaatggatgaatgaggaagactacgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacattgacagatgag
gtgaacagcccagattcagatcgacgggacaagaaggggggaaactataagaagaggaag
cgctccccctctccttcgccaaccccagaagcgaagaagaaaaatgctaagaaaggtccc
tcaacaccttatactaagtcaaagcgtggccacagagaagaggagcaagaagacctcaca
aaggacatggacgagccctcaccagtccccaatgtagaagaggtgacacttcccaaaaca
gttaacacaaagaaagactcagagtcggccccagtcaaaggcggcaccatgactgaccta
gatgaacaggaagatgaaagcatggagacgacgggcaaggatgaggatgagaacagtacg
gggaacaagggagagcagaccaagaatccagacctgcatgaggacaacgtgactgaacag
acccaccacatcatcattcccagctatgctgcctggtttgactacaatagcgttcatgcc
attgagcggagggctctccccgagttcttcaacggcaagaataagtccaagactccagag
atctacctggcctatcgaaactttatgattgacacttaccgactgaacccccaagagtat
cttacctctaccgcctgtcgccgaaacctagcgggtgatgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
accccaatggggcctccgcctacctctcacttccatgtcttggctgacacaccatcaggg
ctggtgcctctgcagcccaagactcctcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccaacaaatgctcaactttcctgacaaaggcaaagagaaacca
acagacatgcaaaactttgggctgcgcacagacatgtacacaaaaaagaatgttccctcc
aagagcaaagctgcagccagtgccactcgtgagtggacagaacaggaaaccctgcttctc
ctggaggcactggaaatgtacaaagatgactggaacaaagtgtccgagcatgtgggaagc
cgcacacaggacgagtgcatcttgcattttcttcgtcttcccattgaagacccatacctg
gaggactcagaggcctccctaggccccctggcctaccaacccatccccttcagtcagtcg
ggcaaccctgttatgagcactgttgccttcttggcctctgtcgtcgatccccgagtcgcc
tctgctgctgcaaagtcagccctagaggagttctccaaaatgaaggaagaggtacccacg
gccttggtggaggcccatgttcggaaagtggaagaagcagccaaagtaacaggcaaggcg
gaccctgccttcggtctggaaagcagtggcattgcaggaaccacctctgatgagcctgag
cggattgaggagagcgggaatgacgaggctcgggtggaaggccaggccacagatgagaag
aaggagcccaaggaaccccgagaaggagggggtgccatagaggaggaagcaaaggagaaa
accagcgaggctcccaagaaggatgaggagaaagggaaagaaggtgacagtgagaaggag
tctgagaagagtgatggagacccgatagtcgatccggagaaggagaaggagccaaaggaa
gggcaggaggaagtgctgaaggaagtggtggagtctgagggggaaaggaagacaaaggtg
gagcgggacattggcgagggcaacctctccaccgccgctgctgccgccctggctgctgcc
gcagtgaaagccaagcacttggctgctgttgaggaaaggaagatcaaatctttggtggcc
ctgctggtggagacccagatgaaaaagttggagatcaaacttcggcactttgaggagctg
gagactatcatggaccgggagcgagaagcactggagtatcagaggcagcagctcctggcc
gacagacaagccttccacatggagcagctgaagtatgcggagatgagggctcggcagcag
cacttccaacagatgcaccaacagcagcagcagccaccgccagccctgcccccaggctcc
cagcctatccccccgacaggagctgctgggccacccgcagtccatggcttggctgtggct
ccagcctctgtagtccctgctcctgctggcagtggggcccctccaggaagcttgggccct
tctgaacagattgggcaggcagggtcaactgcagggccacagcagcagcaaccagctgga
gccccccagcctggggcagtcccaccaggggttcccccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct
cctcctcctgctccatccatcatcccatttggtagtctagctgactccatcagtattaac
ctcccccctcctcctaacctgcatgggcatcaccaccatctcccgttcgccccgggcact
ctccccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcg
accaccaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccaa
agccctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgcca
gacccaggcacccccctgcctccagaccccacagccccgagcccaggcacggtcacccct
gtgccacctccacagtga

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