Macaca fascicularis (crab-eating macaque): 102123483
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Entry
102123483 CDS
T02918
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
mcf
Macaca fascicularis (crab-eating macaque)
Pathway
mcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102123483 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcf03019
]
102123483 (EXOSC1)
Messenger RNA biogenesis [BR:
mcf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102123483 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
102123483 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Nairovirus_NSm
Motif
Other DBs
NCBI-GeneID:
102123483
NCBI-ProteinID:
XP_005566177
Ensembl:
ENSMFAG00000001493
LinkDB
All DBs
Position
9:complement(join(106389459..106389565,106390195..106390279,106390712..106390762,106391685..106391718,106393874..106393962,106397468..106397542,106399958..106400073,106400181..106400211))
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AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacctgtgagatactgtattcccggcgaacgtctgtgtaacttggaggagggc
agcccgggcagcggcacctacacccgccacggctacatcttttcgtcgcttgccggctgc
ctgatgaagagcagcgagaacggcgcgcttcctgtggtgtctgtagtaagagaaacagag
tcccagttactgccagatgtcggagctattgtaacctgtaaggtctctagtatcaattca
cgctttgccaaagtacacatcctatatgtggggtccatgccacttaagaactcttttcga
ggaactatccgcaaggaagatgtccgagcaactgaaaaagacaaggttgaaatttataag
agtttccgcccaggtgacattgtcttggccaaagtgatctccctaggtgatgcacagtcc
aactacctgctaaccactgccgagaacgagctgggagtagtggtagcccacagtgagtca
ggtatccagatggttcccatcagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccggaaagtagcccgagtacaacctgaattcttgcagacctaa
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