KEGG   Macaca fascicularis (crab-eating macaque): 102123741
Entry
102123741         CDS       T02918                                 
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
  KO
K11757  protein polybromo-1
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03082  ATP-dependent chromatin remodeling
mcf05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102123741 (PBRM1)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    102123741 (PBRM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcf03021]
    102123741 (PBRM1)
   03036 Chromosome and associated proteins [BR:mcf03036]
    102123741 (PBRM1)
Transcription machinery [BR:mcf03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102123741 (PBRM1)
Chromosome and associated proteins [BR:mcf03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    102123741 (PBRM1)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 102123741
NCBI-ProteinID: XP_045242010
Ensembl: ENSMFAG00000035585
LinkDB
Position
2:complement(join(115643458..115643630,115645844..115646060,115646171..115646241,115650781..115650936,115654313..115654477,115657833..115658034,115659600..115659810,115660370..115660553,115674086..115674243,115676605..115676750,115685146..115685409,115686139..115686296,115687525..115687710,115709234..115709445,115715371..115716013,115719939..115720044,115721890..115722166,115729572..115729616,115731949..115732046,115733903..115734044,115739276..115739489,115747178..115747269,115748473..115748568,115749950..115750035,115753542..115753640,115757281..115757349,115762841..115762957,115766756..115766899,115774119..115774266,115784044..115784141,115785114..115785266,115787191..115787238))
AA seq 1725 aa
MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS
NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQ
KLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADD
EDDDEDGQDNQGTVTEGSSPTYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPD
YYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI
FYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRAVQG
GRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNN
QGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA
KRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKRNTHDS
EMLGLRRLSSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILE
PMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKE
LGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIF
LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL
IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL
AEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYED
AVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEE
KREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLW
EDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYF
KLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANA
DKGDDEKNTDNSEDSRAEDSFNLEKEKEDVPVEMSNGEPGCHYFEQLHYNDMWLKVGDCV
FIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETC
PMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVV
DDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQ
LQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDY
SFGELSRLVGTEWRNLETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALM
GVVPPPTPMGMLNQQLTPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLP
PGVPGLPGIPPPGVMNQGVAPMVGTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPP
VIQQPTTPMFVAPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQ
ESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENV
NT seq 5178 nt   +upstreamnt  +downstreamnt
atgaggagactggcttttcgaggcgctggttgtgctctggtaaagctgaagaagctggat
tccatgggttccaagagaagaagagctacctccccttccagcagtgtcagcggggacttt
gatgatgggcaccattctgtgtcaacaccaggcccaagcaggaaaaggaggagactttcc
aatcttccaactgtagatcctattgccgtgtgccatgaactctataacaccatccgagac
tataaggatgaacagggcagacttctctgtgagctcttcattagggcaccaaagcgaaga
aatcaaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacag
aaactaaaaatggaagagtatgatgatgttaatttgctgactgctgacttccagcttctt
tttaacaatgcaaaggcctattataagccagattctcctgaatataaagctgcttgcaaa
ctctgggatttgtaccttcgaacaagaaatgagtttgttcagaaaggagaagcagatgat
gaagatgatgatgaagatgggcaagacaatcagggcacagtgactgaaggatcttctcca
acttacttgaaggagatcctggaacagcttcttgaagccatagttgtagctacaaatcca
tcaggacgtctcattagcgaactttttcagaaactgccttctaaagtgcaatatccagat
tattatgcaataattaaggagcctatagatctcaagaccattgcccagaggatacagaat
ggaagctacaaaagtattcatgcaatggccaaagatatagatctcctcgcaaaaaatgcc
aaaacttacaatgagcctggctctcaagtattcaaggatgcaaattcaattaaaaaaata
ttttatatgaaaaaggctgaaattgaacatcatgaaatggctaagtcaagtcttcgaatg
aggactccatccaatttggctgcagccagactgacaggtccttcacacagtaaaggcagc
cttggtgaagagagaaatcccactagcaagtattaccgcaataaaagagcagtacaagga
ggtcgtttatcagcaattacaatggcacttcagtatggctcagaaagtgaagaagatgct
gctttagctgctgcacgttatgaagagggagagtcagaagcagaaagcatcacttccttt
atggatgtttcaaatcctttttatcagctttatgacacagttaggagttgtcggaataac
caagggcagctaatagctgaaccttttttccatttgccttcaaagaaaaaataccctgat
tattaccagcaaattaaaatgcctatatcactacaacagatccgaacaaaactgaagaat
caagaatatgaaactttagatcatttggagtgtgatctgaatttgatgtttgaaaatgcc
aaacgctataatgtgcccaattcagccatctacaagcgagttctaaaattgcagcaagtt
atgcaggcaaagaagaaagagcttgccaggagagacgatattgaggacggagacagcatg
atctcttcagccacctctgataccggtagtgccaaaagaaaaaggaacactcatgacagt
gagatgttgggtctcaggaggctctccagtaaaaagaacataagaaagcagcgaatgaaa
atcttattcaatgttgttcttgaagctcgagagccaggttcaggcagaagactttgtgac
ctatttatggttaagccatccaaaaaggactatcctgattattataaaatcatcttggag
ccaatggacttgaaaataattgagcataacatccgcaatgacaaatatgcaggtgaagag
ggaatgatagaagacatgaagctgatgttccggaatgccaggcactataacgaggagggc
tcccaggtgtacaacgatgcacatatcctggagaagttactcaaggagaaaaggaaagag
ctgggcccattgcctgatgatgatgacatggcttctcccaaactcaagctgagtaggaag
agtggcatttctcctaaaaaatcaaaatacatgactccaatgcagcagaaactaaatgag
gtctatgaagctgtaaagaactatactgataagagaggtcgccgcctcagtgccatattt
ctgaggcttccctctagatctgagttgcctgactactatctgactattaaaaagcccatg
gatatggaaaaaattcgaagtcacatgatggccaacaagtaccaagatattgactctatg
gttgaggactttgtcatgatgtttaataatgcatgtacatacaatgagcctgagtctttg
atctacaaagatgctcttgtactacacaaagtcctgcttgaaacgcgcagagacctggag
ggagatgaggactctcatgtcccaaatgtgactttgctgattcaagagcttatccacaat
ctttttgtgtcagtcatgagtcatcaggatgatgagggaagatgctacagtgattcttta
gcggaaattcctgctgtggatcccaactttcctaacaaaccaccccttacatttgacatc
attaggaagaatgttgaaaataatcgctaccggcggcttgatttatttcaagagcatatg
tttgaagtattggaacgggcaagaaggatgaatcggacagattcagaaatatatgaagat
gcggtagaacttcagcagttttttattaaaattcgtgatgaactctgcaaaaatggagag
attcttctttcaccggcactcagctataccacaaaacatttgcataatgatgtggagaaa
gagaaaaaggaaaaattgccaaaagaaatagaggaagataaactaaaacgagaagaagaa
aaaagagaagctgaaaagagtgaagattcctctggtgctgcaggcctttcaggcttacat
cgcacatacagccaggattgtagctttaaaaacagcatgtaccatgttggagattatgtc
tatgtggaacctgcagaggccaacctacaaccacatatagtctgtattgaaagactgtgg
gaggattcagctggtgaaaaatggttgtatggctgttggttttaccgaccaaatgaaaca
ttccacctggctacacgaaaatttctagaaaaagaagtttttaagagtgactattacaac
aaagttccagttagtaaaattctaggcaagtgtgtggtcatgtttgtcaaggaatacttt
aaattatgcccagaaaacttccgagatgaggatgtttttgtctgtgaatcacggtattct
gccaaaaccaaatcttttaagaaaattaaactgtggaccatgcccatcagttcagttagg
tttgtccctcgggatgtgcctctgcctgtggttcgcgtggcctctgtatttgcaaatgca
gataaaggtgatgatgagaagaatacagacaactcagaggacagtcgagccgaagacagt
tttaacttggaaaaggaaaaagaagatgtccctgtggaaatgtccaatggtgaaccaggg
tgccactactttgagcagctccattacaatgacatgtggctgaaggttggcgactgtgtc
ttcatcaagtcccatggcctggtgcgtcctcgtgtgggcagaattgaaaaagtatgggtt
cgagatggagctgcatatttttatggccccatcttcattcacccagaagaaacggagcat
gagcccacaaaaatgttctacaaaaaagaagtatttctgagtaatctggaagaaacctgc
cccatgacatgtattctcggaaagtgtgctgtgttgtcattcaaggacttcctctcctgc
aggccaactgaaataccagaaaatgacattctgctttgtgagagccgctacaacgagagt
gacaagcagatgaagaaattcaaaggattgaagaggttttcactctctgctaaagtggta
gatgatgaaatttactacttcagaaaaccaattgttcctcagaaggagccatcacctttg
ttggaaaagaagatccagttgctagaagctaaatttgccgagttagaaggtggagatgat
gatattgaagagatgggtgaagaagatagtgaggtcattgaacctccttctctacctcaa
cttcagacccccctggccagtgagctggacctcatgccctacacacccccacagtctacc
ccaaagtctgccaaaggcagtgcaaagaaggaaggctccaaacggaaaatcaacatgagt
ggctacatcctgttcagcagtgagatgagggctgtgattaaggcccaacacccagactac
tctttcggggagctcagccgccttgtggggacagaatggagaaatcttgagacagccaag
aaagcagaatatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagca
gcacagcaacagcagccgagtgcttctccccgagcaggcacccctgtgggggctctcatg
ggggtggtgccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgca
ggcatgatgggtggctatccgccaggccttccacctttgcagggcccagttgatggcctt
gttagcatgggcagcatgcagccacttcaccctggggggcctccaccccaccatcttccg
ccaggtgtgcctggcctcccgggcatcccaccaccgggtgtgatgaaccaaggagtggcc
cctatggtagggactccagcaccaggtggaagtccatatggacaacaggtgggagttttg
gggcctccagggcagcaagcaccacctccatatcccggcccacatccagctggaccccct
gtcatacagcagccaacaacacccatgtttgtagctcccccaccaaagacccagcggctt
cttcactcagaggcctacctgaaatatattgaaggactcagtgctgagtccaacagcatt
agcaagtgggatcagacactggcagctcgaagacgcgacgtccatttgtcaaaagaacag
gagagccgcctaccctctcactggctgaaaagcaaaggggcccacaccaccatggcagat
gccctctggcgccttcgagatttgatgctccgggacaccctcaacattcgccaagcatac
aacctagaaaatgtttaa

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