KEGG   Macaca fascicularis (crab-eating macaque): 102125950
Entry
102125950         CDS       T02918                                 
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a isoform X2
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03020  RNA polymerase
mcf03420  Nucleotide excision repair
mcf05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102125950 (POLR2J)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102125950 (POLR2J)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    102125950 (POLR2J)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcf03021]
    102125950 (POLR2J)
   03400 DNA repair and recombination proteins [BR:mcf03400]
    102125950 (POLR2J)
Transcription machinery [BR:mcf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     102125950 (POLR2J)
DNA repair and recombination proteins [BR:mcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102125950 (POLR2J)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 102125950
NCBI-ProteinID: XP_005549372
Ensembl: ENSMFAG00000039168
UniProt: A0A2K5X258
LinkDB
Position
3:complement(join(51107650..51107685,51108361..51108535,51110552..51110641,51113040..51113092))
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgcccctccagcctttgagtcgttcttgctctttgagggcgagaagaagatcacc
attaacaaggacaccaaggtacccaatgcctgtttattcaccatcaacaaagaagaccac
acactgggaaacatcattaaatcacaactcctaaaggacccacaggtgctatttgctggc
tacaaagtcccccaccccttggagcacaagatcatcatccgagtgcagaccacgccggac
tacagcccccaggaagccttcaccaacgccatcaccgacctcatcagcgagctgtccctg
ctggaggagcgcttccgggtggccatcaaagacaagcaggaaggaattgagtag

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