KEGG   Macaca fascicularis (crab-eating macaque): 102126077
Entry
102126077         CDS       T02918                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03013  Nucleocytoplasmic transport
mcf04150  mTOR signaling pathway
mcf05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102126077 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    102126077 (SEH1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102126077 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcf03019]
    102126077 (SEH1L)
   04131 Membrane trafficking [BR:mcf04131]
    102126077 (SEH1L)
Messenger RNA biogenesis [BR:mcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102126077 (SEH1L)
Membrane trafficking [BR:mcf04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    102126077 (SEH1L)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 WDR55 Beta-prop_EIPR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 102126077
NCBI-ProteinID: XP_005587306
Ensembl: ENSMFAG00000005165
UniProt: A0A7N9D3S3
LinkDB
Position
18:join(81002348..81002458,81006436..81006486,81010364..81010510,81018459..81018670,81026372..81026470,81034901..81035041,81036177..81036334,81037691..81037841,81040504..81040699)
AA seq 421 aa
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP
MIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAI
ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGNSNPSLGSNIPSLQNSLNGSSAGRYFF
PPLDSPRAGSRWSSYAQLLPPPPPPLVEHSCDADTANLQYPHPRRRYLSRPLNPLPENEG
V
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtttgtggctcgcagcatcgcggcggaccacaaggatctcatccacgatgtctctttc
gacttccacgggcggcggatggcgacctgctccagcgatcagagcgtgaaggtctgggat
aaaagtgaaagtggtgactggcattgtactgctagctggaagacacatagtggatctgta
tggcgtgtgacatgggcccatcctgaatttggacaggttttggcttcctgttcttttgac
cgaacagctgctgtatgggaagaaatagtaggagaatcaaatgataaactgcgaggacag
agccactgggttaaaaggacaactctggtggatagcagaacatctgttactgatgtgaag
tttgctcccaagcacatgggtcttatgttagcaacctgttcggcagatggtatagtaaga
atatatgaggcaccagatgttatgaatctcagccagtggtctttgcagcatgagatctca
tgtaagctaagctgtagttgtatttcttggaacccttcaagctctcgagctcattccccc
atgatcgctgtaggaagtgatgacagtagccccaacgcaatggccaaggttcagattttt
gaatataatgaaaacaccaggaaatatgcaaaagctgaaactcttatgacagtcactgat
cccgttcatgatattgcattcgctccaaacttgggaagatctttccatattctagcaata
gcaaccaaagatgtgagaatttttacattaaaacctgtgaggaaagaactgacttcctct
ggtgggccaacaaagtttgaaatccatatagtggctcagtttgataatcataattctcag
gtctggcgagtgagctggaatataacaggaacagtgctagcatcttcaggagatgatggc
tgtgtaagattgtggaaagctaattatatggacaattggaagtgtactggtattttgaaa
ggtaatgggagcccagtcaatgggagttctcagcagggaaactcaaatccttccctaggt
tcaaatattccaagtcttcagaattcattaaatggatcttctgctggcaggtatttcttt
ccccctctggattccccacgggctggatcgagatggtccagttatgcccagctccttcct
cctcctcctcctcctctggtagagcactcttgcgatgctgacactgccaacctccagtat
cctcaccctcgcagacgatatctctctcggcctcttaatcccttacctgagaatgaaggg
gtttaa

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