KEGG T02918: 102126250

Macaca fascicularis (crab-eating macaque): 102126250

Entry

102126250         CDS       T02918

Symbol

SF3B3

Name

(RefSeq) splicing factor 3B subunit 3

K12830

splicing factor 3B subunit 3

Organism

mcf Macaca fascicularis (crab-eating macaque)

Pathway

mcf03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:mcf00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102126250 (SF3B3)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcf03021]
    102126250 (SF3B3)
   03041 Spliceosome [BR:mcf03041]
    102126250 (SF3B3)
   03036 Chromosome and associated proteins [BR:mcf03036]
    102126250 (SF3B3)
Transcription machinery [BR:mcf03021]
Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     102126250 (SF3B3)
Spliceosome [BR:mcf03041]
Complex A
  U2 snRNP components
   U2 snRNP specific factors
    102126250 (SF3B3)
Complex B
    102126250 (SF3B3)
Complex C
   U2 SnRNP specific factors
    102126250 (SF3B3)
Chromosome and associated proteins [BR:mcf03036]
Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     102126250 (SF3B3)
    TFTC complex
     102126250 (SF3B3)

SSDB

Motif

Pfam:

Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

20:complement(join(69769539..69769679,69770154..69770258,69771214..69771357,69772219..69772317,69772862..69773074,69773803..69773928,69775780..69775936,69776034..69776239,69777284..69777458,69779515..69779669,69780687..69780809,69785052..69785195,69785725..69785880,69786836..69786991,69787441..69787592,69793645..69793717,69797515..69797610,69800846..69801011,69804930..69805033,69805666..69805803,69808973..69809085,69812104..69812245,69813543..69813715,69815227..69815553,69817908..69817977))

AA seq 1217 aa
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF

NT seq 3654 nt +upstreamnt +downstreamnt
atgtttctgtacaacttaaccttgcagagagccactggcatcagctttgccattcatggc
aacttttctggaaccaaacaacaagaaattgttgtttcccgtgggaagatcttggagctg
cttcgcccagaccccaacactggcaaagtacataccctactcactgtggaagtattcggt
gttatccggtcactcatggcctttaggctgacaggtggcaccaaagactacattgtagtt
ggcagtgactccggtcgaattgttatcttagaataccagccatctaagaatatgtttgag
aagattcaccaagaaacctttggcaagagtggatgccgtcgcatcgttcctggccagttc
ttagctgtggatcccaaagggcgagccgttatgattagtgccattgagaaacagaaattg
gtgtatattttgaacagagatgctgcagcccgacttaccatttcatctcccctggaagcc
cacaaagcaaatactttagtgtatcatgtagttggagtagatgttggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccgacaggggaagca
gcagctaatacccagcagacacttactttctatgagctagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacacggcaacttccttattacagttccagga
gggtcagatggcccaagtggagtactgatctgctctgaaaactatattacttacaagaac
tttggtgatcagccagatatccgctgtccaattcccaggaggcggaatgacctggatgac
cctgaaagaggaatgatttttgtttgctctgcaacccataagaccaaatcgatgttcttc
tttttggctcaaactgagcagggagatatctttaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtaccagttgctgctgctatgtgt
gtgcttaaaacaggattcctttttgtagcatcagaatttggaaaccattacttatatcaa
attgcacatcttggagatgatgatgaagaacctgagttttcatcagccatgcctctggaa
gaaggagacacattcttttttcagccaagaccacttaaaaaccttgtgctggttgatgag
ttggacagcctctctcccattctgttttgccagatagctgatctggccaatgaagatact
ccacagctgtatgtggcttgtggtaggggaccccgatcatctctgagagtactaagacat
ggacttgaggtgtcagaaatggctgtttctgagctacccggtaaccccaatgctgtctgg
acagtgcgtcgacacattgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccaccctggtgttgtccattggagagactgtagaagaagtgactgactctgggttcctg
gggaccaccccgaccttgtcctgctccttattaggagatgatgccttggtgcaggtctat
ccagatggcattcggcacatacgagcagacaagagagtcaatgagtggaagacccctgga
aagaaaacaattgtgaagtgtgcagtgaaccagcgacaagtggtgattgccctgacggga
ggagagttggtctattttgagatggatccctcaggacagctgaatgagtacacagaacgg
aaggagatgtcagcagatgtggtgtgcatgagtctggccaatgtaccccctggagagcag
cggtctcgcttcctggctgtggggcttgtggacaacactgtcagaatcatctccctggac
ccctcagactgtttgcaacctctaagcatgcaggctctcccagcccagcctgagtccttg
tgtattgtggaaatgggtgggacggagaagcaggatgagctgggtgagaggggctcgatt
ggcttcctatacctgaatattgggctacagaacggtgtgctgctgaggactgtcctggac
cctgtcactggggatttgtctgacactcgcactcggtacctggggtcccgtcctgtgaag
ctgttccgagtccgaatgcaaggccaggaggcagtattggccatgtcaagccgctcatgg
ttgagctattcttaccaatctcgcttccatctcacccccctgtcttacgagacactggaa
tttgcatcgggttttgcctcggaacagtgtcccgagggcattgtggccatctccaccaac
accctgcgcattttggcattagagaagctcggtgctgtcttcaatcaagtagccttccca
ctgcagtacacacccaggaaatttgtcatccaccctgagagtaacaaccttattatcatt
gaaacggaccacaatgcctacactgaggccacaaaagctcagagaaagcagcagatggca
gaggaaatggtggaagcagcaggggaggatgagcgggagctggccgcagagatggcagca
gcattcctcaatgaaaacctccctgaatctatctttggagctcccaaggctggcaatggg
cagtgggcctctgtgatccgagtgatgaatcccattcaggggaacacactggaccttgtc
cagctggaacagaatgaggcagcttttagtgtggctgtgtgcaggttctccaacactggt
gaagactggtatgtgctggtgggtgtggccaaggacctgatactgaacccccgatctgtg
gcagggggcttcgtctatacttacaagcttgtgaacaatggggaaaaactggagtttttg
cacaagactccggtggaagaggtccctgctgccattgccccattccaagggagggtgttg
attggtgtggggaagctgttgcgtgtctatgacctgggaaagaagaagttactccgaaaa
tgcgagaataagcatattgccaattatatctctgggatccagactattggacatagggta
attgtatctgacgtccaagaaagtttcatctgggttcgctacaagcgtaatgaaaaccag
cttatcatctttgctgatgatacctaccctcgatgggtcactacagccagcctcctggac
tatgacactgttgctggggcagacaagtttggcaacatatgtgtggtgagactcccacct
aacaccaatgatgaagtagatgaggaccctacaggaaacaaagccctgtgggaccgtggc
ttgctcaatggggcctcccagaaggcagaggtgatcatgaactaccatgtcggagagacg
gtgctgtccttacagaagactacgctgatccccggaggctcagaatcacttgtctatacc
accttgtctggaggaattggcatccttgtgccattcacgtcccatgaggaccatgacttc
ttccagcatgtggaaatgcacctgcggtctgaacatccccctctctgtgggcgggaccac
ctcagctttcgttcctactacttccctgtgaagaatgtgattgatggagacctctgtgag
cagttcaattccatggaacccaacaaacaaaagaacgtctctgaagaactggaccgaacc
ccacccgaggtgtccaagaaactcgaggatatccggacccgctatgccttctga

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