KEGG   Macaca fascicularis (crab-eating macaque): 102126362
Entry
102126362         CDS       T02918                                 
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf04140  Autophagy - animal
mcf04148  Efferocytosis
mcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102126362 (VPS41)
   04148 Efferocytosis
    102126362 (VPS41)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102126362 (VPS41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcf04131]
    102126362 (VPS41)
Membrane trafficking [BR:mcf04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    102126362 (VPS41)
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 Clathrin WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_EML_2 zf_RING_Vps8_fungal Beta-prop_HPS5 Vps39_1 WD40_WDHD1_1st zf_RING_Vps8 Beta-prop_RIG_2nd TPR_PEP5_VPS11 zf-RING_5 Frtz RIG-I_C Beta-prop_IFT140_2nd zf-RING_2 zf-rbx1
Other DBs
NCBI-GeneID: 102126362
NCBI-ProteinID: XP_005549812
Ensembl: ENSMFAG00000041501
LinkDB
Position
3:join(91388094..91388114,91399448..91399486,91431775..91431882,91440122..91440199,91471780..91471854,91480522..91480584,91483889..91483954,91504417..91504536,91505670..91505816,91511442..91511508,91523437..91523534,91525989..91526118,91527592..91527707,91528984..91529040,91532512..91532573,91534407..91534488,91536462..91536554,91541506..91541633,91543000..91543144,91545339..91545380,91545523..91545573,91547952..91548089,91554650..91554704,91556725..91556865,91558158..91558294,91572229..91572328,91572433..91572477,91574062..91574141,91574718..91574798)
AA seq 854 aa
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSVVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDIISKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKI
CSVKERHASEMRDLPSRYVEIVSQFETEFYVSGLAPLCDQLVVLSYVKEISEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVERGDYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGVLVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSA
KNRGPGSAILEMKK
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggcggaagcagaggagcaggaaactgggtcccttgaagaatctacagatgagtctgag
gaagaagagagcgaagaggaacccaagctgaagtatgaaaggctttccaatggggtaact
gaaattcttcagaaggatgcggctagctgcatgacagtccatgataagtttttggcattg
ggcacacattatggcaaggtttatttacttgatgtccaggggaacatcactcagaagttt
gatgtaagtcctgtgaagataaatcagattagcttggatgaaagtggagagcacatgggc
gtgtgttcagaggatggcaaggtgcaggtatttggactgtattctggagaagaatttcat
gagacttttgactgtcccattaaaattattgctgtgcacccacatttcgtgagatccagt
tgcaagcagtttgtgaccggagggaagaagctgctactgtttgaacggtcatggatgaac
agatggaagtccgttgttctgcatgaaggggaagggaacataaggagtgtgaagtggaga
ggccatctgattgcttgggccaataatatgggtgtgaagatttttgacatcatctcaaag
caaagaatcaccaatgtgccccgggatgatataagtcttcgcccggacatgtatccctgc
agcctctgctggaaggacaatgtgacactgattattggctgggggacttctgtcaagata
tgctcagtgaaggaacggcatgccagtgaaatgagggatttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattctacgtcagtggacttgcacctctctgtgatcag
cttgttgtactttcctatgtaaaggagatttcagaaaaaacggaaagagaatactgtgcc
aggcctagactggacatcatccagccactttctgagacttgtgaagagatctcttctgat
gctttgacagtcagaggctttcaggagaatgaatgtagagattatcatttagagtactct
gaaggggaatcacttttttacatcgtgagtccgagagatgttgtagtggccaaggaacgg
gaccaagatgatcacattgactggctccttgaaaagaagaaatatgaagaagcattgatg
gcagctgaaattagtcaaaaaaatattaaaagacataagattctggatattggcttggca
tatataaatcatctggtggagagaggagactatgacatagcagcgcgcaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatatgaagtttataaatttaaagaaattgga
cagcttaaggctattagtccttatttgccaagaggcgatccagttctgaaaccgcttatc
tatgaaatgatcttacatgaatttttggagagtgattatgagggttttgccacattgatc
cgagaatggcctggagatctgtataacaattcagtcatagttcaagcagttcgggatcat
ctgaagaaagatagtcagaacaagactttacttaaaaccctggcagaattgtacacctat
gacaagaactatggcaatgctctagaaatatacttaacattaagacataaagacgttttt
cagttgatccacaagcataatcttttcagttctatcaaggataaaatcgttttattaatg
gattttgattcagagaaagctgttgacatgcttttggacaatgaagataaaatttcaatt
aaaaaggtcgtggaagaattggaagacagaccagagctgcagcatgtgtatttgcataag
cttttcaagagagaccaccataaggggcagcgttaccatgaaaaacagatcagtctttat
gctgaatatgatcgaccaaacttacttccctttctccgagacagtacccattgcccactt
gaaaaggctcttgagatctgtcaacagagaaactttgtagaagagacagtctatcttctg
agccgaatgggtaatagccgaagtgccctgaagatgattatggaggaattacatgatgtt
gataaagcaatcgaatttgccaaggaacaagatgatggagagctgtgggaagatttgatt
ttatattccatcgacaaaccaccatttattactggcttgttaaacaacattggcacacat
gttgacccaattctactgattcaccgtattaaggaaggaatggagattcccaatttgaga
gattccttggttaaaattctgcaagactacaatttgcaaattttgcttcgtgaaggctgc
aagaagattctcgtagctgactctttgtccttactgaagaaaatgcaccgaactcagatg
aaaggtgttcttgttgatgaggagaacatctgtgagtcgtgcctttcccctattcttcca
tcagatgcagctaagcccttcagcgtggtggtcttccattgccggcacatgttccacaag
gagtgcctgcccatgcccagcatgaactctgctgcacagttctgcaacatctgcagtgct
aagaaccgtggaccaggaagtgcaattttggagatgaaaaaatag

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