Macaca fascicularis (crab-eating macaque): 102126413
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Entry
102126413 CDS
T02918
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X3
KO
K16498
protocadherin delta 1
Organism
mcf
Macaca fascicularis (crab-eating macaque)
Pathway
mcf03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102126413 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcf01009
]
102126413 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcf04515
]
102126413 (PCDH1)
Protein phosphatases and associated proteins [BR:
mcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102126413 (PCDH1)
Cell adhesion molecules [BR:
mcf04515
]
Cadherins
Protocadherins
102126413 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
102126413
NCBI-ProteinID:
XP_015307541
Ensembl:
ENSMFAG00000035695
LinkDB
All DBs
Position
6:complement(join(148334858..148335252,148338022..148338241,148344010..148346205,148349312..148350148))
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AA seq
1215 aa
AA seq
DB search
MGPLRHSPGPGGQRLLLPSMLLALLLLLAPSPGHATRVVYKVPEEQPPNTLIGSLAADYG
FPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITD
LVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGV
ASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRAS
SALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQA
PEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMND
NAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQL
RQASETGSDSKKKYFLQTTTPLDYEKVRDYTIEIVAVDSGNPPLSSTNSLKVQVVDINDN
APVFTQSVTEVAFPENNKPGEVIAEVTASDADSGSNAELVYSLEPEPAAKGLFTISPETG
EIQVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVM
ENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYT
FQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTSHRLLTPQTRLGETVSQVAAE
DFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPR
YGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAGDPEYERSKQRGNILFGVVAGVV
AVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPKPSGKASKGNKSKGKKSKSPKPV
KPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQP
QSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDYSYRTNPPKYPSKQLPHRRVTFS
ATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALPEDHYERTTPDGSIGEME
HPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSSPSRRTKSSALKLSTFVPYQDRG
GQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDSATLEEIPLTQTSDFPPA
ATPASAQTAKREIYL
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggggccgctgaggcacagcccaggccctggggggcaacggctactgctgccctccatg
ctgctagcactgctgctcctgctggctccatccccaggccacgccactcgggtagtgtac
aaggtgccggaggaacagccacccaacaccctcattgggagcctcgcagccgactatggt
tttccagatgtggggcacctgtacaagctagaggtgggtgccccgtaccttcgcgtggat
ggcaagacaggtgacattttcaccactgagacctccatcgaccgtgaggggctccgtgaa
tgccagaaccagctccctggtgatccctgcatcctggagtttgaggtgtctatcacagac
ctcgtgcagaatggcagcccccggctgctagagggccagatagaagtacaagacatcaat
gacaacacacccaacttcgcctcaccagtcatcactctggccatccctgagaacaccaac
atcggctcactcttccccatcccgctggcttcagaccgtgatgctggtcccaacggtgtg
gcatcctatgagctgcaggctgggcctgaggcccaggagctatttgggctgcaggtggca
gaggaccaggaggagaagcaaccacaactcattgtgatgggcaacctggaccgtgagcgc
tgggactcctacgacctcaccattaaagtgcaggatggcggcagccccccacgcgccagc
agtgccctgctgcgtgtcaccgtgctcgacaccaatgacaacgcccccaagtttgagcgg
ccctcctatgaggccgaactatctgagaatagccccataggccactcggtcatccaggtg
aaggccaatgactcagaccaaggtgccaatgcagagattgaatacacattccaccaggca
cccgaagttgtgaggcgtcttcttcgactggacaggaacactggacttatcactgttcag
ggcccggtggatcgtgaggacttaagcacgttgcgcttctcagtgcttgccaaggaccga
ggcaccaaccccaagagtgctcgtgcccaagtggttgtgactgtgaaagacatgaatgac
aacgcccccaccattgagatccggggcatagggctagtgactcatcaagatgggatggct
aacatctcagaggatgtggcagaggagacagctgtggccctggtgcaggtatctgaccga
gatgagggagagaacgcagctgtcacctgtgtggtggcaggtgatgtgcccttccagctg
cgccaggccagtgagacaggcagtgacagcaagaagaagtatttcctgcagactaccacc
ccgctggactacgagaaggtcagagactacaccattgagattgtggctgtggactctggc
aaccccccactctccagcaccaactccctcaaggtgcaggtggtggacatcaatgacaac
gcacctgtcttcactcagagtgttactgaggtcgccttcccggaaaacaacaagcctggt
gaagtgattgctgaggtcactgccagtgatgctgactctggctctaatgctgagctggtt
tactctctggagcctgagccggctgctaagggcctcttcaccatctctcccgagactgga
gagatccaggtgaagacatccctggatcgggaacagagggacagctatgagttgaaggtg
gtggcagctgaccggggcagccctagcctccagggcacagccactgtccttgtcaatgtg
ctggactgcaatgacaatgaccccaaatttatgctgagtggctataacttctcagtgatg
gagaacatgccagcgctgagtccggtgggcatggtgactgtcattgatggagacaaaggg
gagaatgcccgggtgcagctctcagtggagcaggacaatggtgactttgtgatccagaat
ggcacaggcactatcctctccagcctgagcttcgatcgagagcaacaaagcacctacacc
ttccagctgaaggcggtggatggtggcgtcccacctcgctcagcttatgttggcgtcacc
atcaatgtgctggatgagaatgacaacgcaccctatatcactgccccttctaacacctct
caccggctgctgaccccccagacacgtcttggtgagacggtcagccaggtggcagctgag
gactttgactctggtgtcaatgctgagctgatctacagcatcgcaggtggcaacccttac
ggactcttccagattgggtcacattcaggtgccatcaccctggagaaggagattgagcgg
cgccaccatgggctacatcgcctggtggtgaaggtcagtgaccgcggcaagcccccacgc
tatggcacagccttggtccacctttatgtcaatgagactctggccaaccgcacgctgctg
gagaccctcctgggccacagcctggacacaccgctggatattgacattgctggggatcca
gaatacgagcgctccaagcagcgtggcaacattctctttggtgtggtggccggtgtggtg
gccgtggccttgctcatcgccctggcggttcttgtgcgctactgccggcagcgggaggct
aaaagtggttaccaggctggtaagaaggagaccaaggacctgtacgcccccaagcccagt
ggcaaggcctccaagggaaacaaaagcaagggcaagaagagcaagtccccaaagcccgtg
aagccagtggaggacgaggatgaggccgggctgcagaagtccctcaagttcaacctgatg
agcgatgcccctggggacagtccccgcatccacctgcccctcaactacccaccaggcagc
cctgacctgggccgccattaccgctctaactccccactgccttccatccagctgcagccc
cagtcaccctcggcctccaagaagcaccaggtggtacaggacttgccacctgcaaacaca
ttcgtgggcaccggggataccacgtccacgggctctgagcagtactccgactacagctac
cgcaccaacccccccaaataccccagcaagcagttacctcaccgccgcgtcaccttctcg
gccaccagccaggcccaggagctgcaggacccatcccagcacagttactatgacagtggc
ctggaggagtctgagacaccgtccagcaagtcatcctcagggcctcgactcggtcccctt
gccctgcctgaggatcactatgagcgcaccacccctgacggcagcataggagagatggag
caccccgagaatgaccttcgccctttgcctgatgtcgccatgacaggcacatgtacccgg
gagtgcagtgagtttggccactctgacacatgctggatgcctggccagtcatctcccagc
cgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggaccgagga
gggcaggagcctgcgggtgccggcagccccagccccccggaagaccggaacaccaaaacg
gcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgattcctgc
aaggactcggccaccttggaggaaatccccctgacccagacctcggacttcccacccgca
gccacaccggcatctgcccagacggccaagcgcgagatctacctgtga
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