Macaca fascicularis (crab-eating macaque): 102128821
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Entry
102128821 CDS
T02918
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
mcf
Macaca fascicularis (crab-eating macaque)
Pathway
mcf05016
Huntington disease
mcf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcf00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
102128821 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
102128821 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcf03019
]
102128821 (HTT)
04131 Membrane trafficking [BR:
mcf04131
]
102128821 (HTT)
03029 Mitochondrial biogenesis [BR:
mcf03029
]
102128821 (HTT)
Messenger RNA biogenesis [BR:
mcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102128821 (HTT)
Membrane trafficking [BR:
mcf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102128821 (HTT)
Mitochondrial biogenesis [BR:
mcf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
102128821 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
Motif
Other DBs
NCBI-GeneID:
102128821
NCBI-ProteinID:
XP_045247979
Ensembl:
ENSMFAG00000036776
LinkDB
All DBs
Position
5:3228449..3397424
Genome browser
AA seq
3155 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQQQQPPPPPPPPPPPPQLPQPPQAQPMLPQPQPPP
PPPPPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSVRNSPEFQKLLGIAM
ELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWR
FAELAHLVRPQKCRPYLVNLLPCLSRTSKRPEESVQETLAAAVPKIMASFGNFANDNEIK
VLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLVPVEEEHSTL
LILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSAEQLVQVYELTLHHTQHQD
HNVVTGALELLQQLFRTPPPELLQALTTVGGIGQLTAAKEESGGRSRSGSIVELIAGGGS
SCSPVLSRKQKGKVLLGEEEALEDDSESRSDVSSSAFAASVKDDISGELATSSGVSTPGS
AGHDIITEQPRSQHTLQADSVDLASCDLTSSATDGDEEDILSHSSSQVSAVPSDPAMDLN
DGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGTDNQYLGLQIGQPQDEDEEATGVL
PDEASEAFRNSSMALQQAHLLKNMSHSRQPSDSSVDKFVLRDEATEPGDQENKPCRIKGD
IGQSTDDDSAPLVHCVRLLSASFLLTGGKNVLVPDRDVRVSVKALALSCVGAAVALHPES
FFSKLYKVPLDTTEYPEEQYVSDILNYIDHGDPQVRGATAILCGTLICSILSRSRFHVGD
WMGAIRTLTGNTFSLADCIPLLRKTLKDESSVTCKLACTAVRHCVMSLCSSSYSELGLQL
IIDVLTLRNSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTGLLKLQERVLN
NVVIHLLGDEDPRVRHVAAASLIRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHET
QPPSHFSVSTITRIYRGYNLLPSITDVTMENNLSRVIAAVSHELITSTTRALTFGCCEAL
CLLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMATMILTLLSSAWFPLDLSAHQDA
LILAGNLLAASAPKSLRSSWASEEEANPAATKQEEVWPALGDRALVPMVEQLFSHLLKVI
NICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPLSPKKGSEASAA
SRQSDTSGPVTTSKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGFLRS
ALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQFD
GLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDTSG
WFDVLQKVSTQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQVL
DLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERY
HSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKE
VVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQQMHIDSHE
ALGVLNTLFEILAPSSLRPVDMLLRSMFVTPNTMASVSTVQLWISGILAILRVLISQSTE
DIVLSRIQELSFSPYLISCPVINRLRDGDSNSALEEHSEGKQIKNLPEETFSRFLLQLVG
ILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSEERIESSHDSWSPEKNAVEK
LAGMFRRITAAATRLFRSDGCGGSFYTLDSLNLRARSMITTHPALVLLWCQILLLVNHTD
YRWWAEVQQTPKRHSLSSTKLLSPQMSGEEEDSDLAAKLGMCNREIVRRGALILFCDYVC
QNLHDSEHLTWLIVNHIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTP
TTLKKTLQCLEGIHLSQSGAVLTLYVDRLLCTPFRVLARMVDILACRRVEMLLAANLQSS
MAQLPMEELNRIQEYLQSSGLAQRHQRLYSLLDRFRLSTMQDSLSPSPPVSSHPLDGDGH
VSLETASPDKDWYIHLVKSQCWTRSDSALLEGAELVNRIPAEDMSAFMMNSEFNLSLLAP
CLSLGMSEISGGQRSPLFEAAREVTLARVSSTVQQLPAVHHVFQSDLPAEPAAYWSKLND
LFGDAALYQSLTTLARALAQYLVAVSKLPSHLHLPPEKEKDTMKFVVATLEALSWHLIHE
QIPLSLDLQAGLDCCCLALQLPGLWSVVSSAEFVTHACSLIHCVHFILEAVAVQPGEQLL
SPERRTNTPKAIREEEEEIDPNTQNPKYITAACEMVAEMVESLQSVLALGHKRNSGVPAF
LTSVLRNIVVSLARLPLVNSYTRVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFK
EFIYRINTLGWTSRTQFEETWATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAIT
SLVLSAMTVPVAGNPAVSCLEQQPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKREN
IATHHLYQAWDPVPSLSPATTGALISHEKLLLQINPERELGSVSYKLGQVSIHSVWLGNS
ITPLREEEWDEEEEEEADAPAPSSPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSN
SARRTPAILISEVVRSLLVVSDLFTERNQFELMYVTLTELRRVHPSEDEILAQYLVPATC
KAAAVLGMDKVVAEPVSRLLESTLRSSHLPSRVGALHGILYVLECDLLDDTAKQLIPVIS
DYLLSNLKGIAHCVNIHSQQHVLVMCATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSE
ESTPSIIYHCALRGLERLLLSEQLSRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMY
TGKEKVSPGRTSDPNPAAPDSESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDF
FPPQDIMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRT
PVAMATWSLSCFFVSASTSPWVAAILPHVISRMGKLEQVDVNLFCLVATDFYRHQIEEEL
DRRAFQSVFEVVAAPGSPYHRLLTCLRNVHKVTTC
NT seq
9468 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggaaaagctgatgaaggccttcgagtctctcaagtccttccagcagcag
cagcagcagcagcagcagcagcaacagccgccgccgccgccgccgccgccgcctcctcct
cctcagcttcctcagccgccgcaggcacagccgatgctgcctcagccgcagccgcccccg
ccgccgcccccgccaccacccggcccggctgtggctgaggagccgctgcaccgaccaaag
aaagaactttcagctaccaagaaagaccgtgtgaatcattgtctgacaatatgtgaaaac
atagtggcacagtctgtcagaaattctccagaatttcagaaacttctgggcatcgctatg
gaactttttctgctgtgcagtgatgacgcagagtcggatgtcagaatggtggctgatgaa
tgcctcaacaaagttatcaaagctttgatggattctaatcttccaaggttacagctcgag
ctctataaagaaattaaaaagaatggtgcccctcggagtttgcgtgctgccctgtggagg
tttgccgagctggctcacctggttcggcctcagaaatgcaggccttacctggtgaacctt
ctgccgtgcctaagtcgaacaagcaagagacccgaggaatcagtccaggagaccttggct
gcagctgttcccaaaattatggcttctttcggcaattttgcaaatgacaatgaaattaag
gttttgttaaaggccttcatagcgaacctgaagtcaagctcccccactattcggcggaca
gctgctggatcagcagtgagcatctgccagcactcaagaaggacacagtatttctatagc
tggctactaaatgtgctcttaggcttactggttcctgtcgaggaggagcactccaccctg
ctgattcttggcgtgctgctcaccctgaggtatttggtgcccttgctgcagcagcaggtc
aaggatacaagcctgaaaggcagcttcggagtgacacggaaagaaatggaggtctctcct
tctgcagagcagcttgtccaggtttatgaactgacgttacatcatacacagcaccaagac
cacaatgttgtgaccggagccctggagctgttgcagcagctcttcagaacgcctcccccc
gagcttctgcaagccctgaccacagtggggggcattgggcagctcaccgccgctaaggag
gagtctggtggccgaagccgtagtgggagtattgtggaacttatagctggagggggttcc
tcatgcagccctgtcctttcaagaaaacaaaaaggcaaagtgctcttaggagaagaagaa
gccttggaggatgactctgaatcgagatcggatgtcagcagctctgcctttgcagcctca
gtgaaggatgatatcagtggagagctggctacttcttcaggggtttccactccagggtca
gcaggtcatgacatcatcacggagcagccacggtcacagcacacgctgcaggcggactca
gtggatctggccagctgtgacttgacaagctctgccacggatggggatgaggaggatatc
ttgagccacagctccagccaggtcagcgccgtcccatctgaccctgccatggacctgaat
gatgggacccaggcctcctcgcccatcagcgacagctcccagaccaccaccgaagggcct
gattcagctgtcaccccttcagacagttctgaaattgtgttagacggtaccgacaaccag
tatttgggcctgcagattggacagccccaggatgaagatgaggaagccacaggtgttctt
cctgacgaagcctcggaggccttcaggaactcttccatggcccttcaacaagcacattta
ttgaaaaacatgagtcacagcaggcagccttctgacagcagtgttgataaatttgtgttg
agagatgaagctactgaaccgggtgatcaagaaaacaagccttgccgcatcaaaggtgac
atcggacagtccactgatgatgattctgcacctcttgtccattgtgtccgccttttatct
gcttcgtttttgctaacagggggaaaaaatgtgctggttccggaccgggatgtgagggtc
agcgtgaaggccctggccctcagctgtgtgggagcagctgtggctctccacccagaatct
ttcttcagcaaactctataaagttcctcttgacaccacagaataccctgaggaacaatat
gtctcagatatcttgaactacatcgatcatggagacccacaggttcgaggagccactgcc
attctctgtgggaccctcatctgctccatcctcagcaggtcccgcttccacgtgggagat
tggatgggcgccattagaaccctgacaggaaacacattttctttggcggattgcattcct
ttgctgcggaaaacactgaaggacgagtcttctgtcacttgcaagctggcttgtacagct
gtgaggcattgtgtcatgagtctctgcagcagcagctacagtgagttaggactgcagctg
atcatcgacgtgctgactctgaggaacagttcctattggctggtgaggacagagcttctg
gaaacccttgcggagattgacttcaggctggtgagctttttggaggcaaaagcagaaaac
ttacacagaggggctcatcattatacagggcttttaaagctgcaagaacgagtgctcaat
aatgttgtcatccatttgcttggggatgaagaccccagggtgcgacatgttgctgcagca
tcattaattaggcttgtcccaaagctgttttataaatgtgaccaaggacaagctgaccca
gtagtggccgtggcaagagatcaaagcagtgtttacctgaaacttctcatgcatgagacg
cagcctccatctcatttctccgtcagcacaataaccagaatatacagaggctataaccta
ctgccaagcataacagatgtcactatggaaaataacctttcaagagttattgcagcagtt
tctcatgaactgatcacatcaaccacgagagcactcacttttggatgctgtgaagctttg
tgtcttctttccactgccttcccagtttgcatttggagtttaggttggcactgtggagtg
cctccactgagcgcctccgatgagtctaggaagagctgtaccgttgggatggccacgatg
attctgaccctgctctcgtcagcttggttcccattggatctctcagcccatcaagatgct
ttgattttggccggaaacttgcttgcagccagtgctcctaaatctctgagaagttcatgg
gcctctgaagaagaagccaacccagcagccaccaagcaagaggaggtctggccagccctg
ggggaccgggccttggtgcccatggtggagcagctcttctcccacctgctgaaggtgatc
aacatttgtgcacatgtcctggacgacgtggctcctggaccggcaataaaggcagccttg
ccttctctaacaaaccccccttctctaagtcccatccgacgaaaggggaaggagaaagaa
ccaggagaacaagcatctgtaccgttgagtcccaagaaaggcagtgaggccagtgcagct
tctagacaatctgatacctcaggtcctgttacaacaagtaaatcctcatcactggggagt
ttctatcatcttccttcatacctcaaactgcatgatgtcctgaaagctacgcacgctaac
tacaaggtcaccttggatcttcagaacagcacggaaaaatttggagggtttcttcgctca
gccttggacgttctctctcagattctagagctggccacactgcaggacattgggaagtgt
gttgaggagatcctaggatacctgaaatcctgctttagtcgagaaccaatgatggcaact
gtttgtgttcaacaattgttgaagactctctttgggacaaacttggcctcccagtttgac
ggcttatcatccaaccccagcaagtcacaaggccgagcacagcgccttggctcctccagt
gtgaggccaggcttgtaccactactgcttcatggccccgtacacccacttcacccaggcc
ctcgctgacgccagcctgaggaacatggtgcaggcggagcaggagcacgacacctcggga
tggtttgatgtcctccagaaagtgtctacccagttgaagacgaacctcacaagtgtcaca
aagaaccgtgcagataagaatgctattcataatcacattcgtttgtttgaacctcttgtt
ataaaagctttaaaacagtacacgacaacaacatctgtgcagttacagaagcaggtttta
gatttgctggcgcagctggttcagttacgggttaattactgtcttctggattcagatcag
gtgtttattggctttgtattgaaacagttcgaatacattgaagtgggccagttcagggaa
tcagaggcaatcattccaaacatctttttcttcttggtattactatcttatgaacgctat
cattcaaaacagatcattggaattcctaaaatcattcagctctgtgatggcatcatggcc
agtggaaggaaggctgtgacacacgccataccggctctgcagcccatagtccatgacctt
tttgtattaagaggaacaaataaagctgatgcaggaaaagagcttgaaacccaaaaagaa
gtggtggtatcaatgttactgagactcatccagtaccatcaggtgttggagatgttcatt
ctcgtcctgcagcagtgccacaaggagaatgaagacaagtggaagcgactgtctcgacag
atagctgacatcatcctcccaatgttagccaaacagcagatgcacattgactctcatgaa
gcccttggagtgttaaatacattatttgagattttggccccttcctccctccgtccggtg
gacatgcttttacggagtatgttcgtcactccaaacacaatggcatctgtgagcactgtt
caactgtggatatcaggaattctggccattttgagggttctgatttcccagtcaactgaa
gatattgttctttctcgtattcaggagctctctttctctccatatttaatctcctgtcca
gtaattaataggctaagagatggggacagtaattcagcactagaagaacacagtgaaggg
aaacaaataaagaatttgccagaagaaacattttcaaggtttctattacaactggtgggt
attcttttagaagacattgttacaaaacagctgaaggtggaaatgagtgagcagcaacat
actttctattgccaagaactaggcactctgctaatgtgtctgatccacatcttcaagtct
gaggagaggatagaatcaagtcatgattcctggagccctgagaagaatgctgtggagaaa
cttgcaggaatgttccggagaatcacagcagctgccactagactgttccgcagtgatggc
tgtggcggcagtttctacaccctggacagcttgaatttgcgggctcgttccatgatcacc
acccacccggccctggtgctgctctggtgtcagatcctgctgcttgtcaaccacaccgac
taccgctggtgggcagaagtgcagcagaccccgaaaagacacagtctgtccagcacaaag
ttacttagtccccagatgtctggagaagaggaggattctgacttggcagccaaacttgga
atgtgcaatagagaaatagtacgaagaggggctctcattctcttctgtgattatgtctgt
cagaacctccatgactccgagcacttaacgtggctcattgtaaatcacattcaagatctg
atcagcctttcccacgagcctccagtacaggacttcatcagtgctgttcatcggaactcc
gctgccagcggcctcttcatccaggcaattcagtctcgttgtgaaaacctttcaactcca
accactctgaagaaaactcttcagtgcttggaggggatccatctcagccagtcgggagct
gtgctcacgttgtatgtggacaggctgctgtgcacccctttccgtgtgctggctcgcatg
gtcgacatccttgcttgtcgccgggtagaaatgcttctggctgcaaatttacagagcagc
atggcccagttgccaatggaagaactcaacagaatccaggaataccttcagagcagcggg
ctcgctcagagacaccagaggctctattccctgctggacaggtttcgtctctccaccatg
caagactcacttagtccctctcccccagtctcttcccacccgctggacggggatgggcac
gtgtcactggaaacagcgagtccggacaaagactggtacattcatcttgtcaaatcccag
tgttggaccaggtcagattctgcgctgctggaaggtgcagagctggtgaatcggattcct
gctgaagatatgagtgccttcatgatgaactcggagttcaacctaagcctgctagctcca
tgcttaagcctagggatgagtgaaatttctggtggccagaggagtccgctttttgaagca
gcccgtgaggtgactctggcccgcgtgagcagcaccgtgcagcagctccctgctgtccac
cacgtcttccagtccgacctgcctgcagagccggcggcctactggagcaagttgaatgat
ctatttggggatgctgcgctgtatcagtccctgaccactctggcccgggccctggcacag
tacctggtggcggtctccaaactgcccagtcacttgcaccttcctcctgagaaagagaag
gacaccatgaaattcgtggtggcaacccttgaggccctgtcctggcatttgatccatgag
cagattccgctgagtctggatctccaggcagggctggactgctgctgcctggccctgcag
ctgcctggcctctggagcgtggtctcctccgcagagtttgtgacccacgcctgctccctc
atccactgtgtgcacttcatcctggaggctgttgcagtgcagcctggagagcagcttctt
agtccagaaagaaggacaaataccccaaaagccatcagagaggaggaggaggaaatagat
cctaacacacagaatccgaagtatatcaccgcagcctgtgagatggtggcagaaatggtg
gagtctctgcagtcggtgttggctttgggtcataaaaggaatagtggcgtgccggcgttt
ctcacgtcagtgctcaggaacatcgtcgtcagcctggcccgcctgccccttgtcaacagc
tacacacgtgtgcccccactggtgtggaagcttggatggtcacccaaaccgggaggggat
tttggcacagcattccctgagatccccgtggagttcctccaggaaaaggaagtctttaag
gagttcatctaccgcatcaacacgctaggctggaccagtcgtactcagtttgaagaaact
tgggccactctccttggtgtcctggtgacgcagcccctcgtgatggagcaggaggagagc
ccaccagaagaagatacagagaggacgcagatcaacgtcctggccgtgcaggccatcacc
tcactggtgctcagtgcaatgaccgtgcctgtggccggcaacccagctgtgagctgcttg
gagcagcagccccggaacaagcctctgaaagctctggacaccaggtttgggaggaagctg
agcattatcagagggattgtagagcaagagattcaagcaatggtttcaaagagagagaac
atcgccacccatcatttataccaggcgtgggatcctgtcccttctctgtccccggctacc
acaggtgccctcatcagccacgagaagctgctgctgcagatcaaccccgagcgggagctg
gggagcgtgagctacaaactcggccaggtgtccatacactctgtgtggctggggaacagc
atcacacccctaagggaggaggaatgggacgaggaggaggaggaggaggccgacgcccct
gcaccttcatcaccacccacgtctccagtcaactccaggaaacaccgggctggagttgac
atccattcctgttcgcagtttttactcgagttgtacagccgctggatcctgccatccaac
tcagccaggaggaccccggccatcctgatcagtgaggtggttcgatcccttctggtggtc
tcagacttgttcactgagcgcaaccagtttgagctgatgtatgtgacgctgacagaactg
cgaagggtgcatccttcagaagacgagatcctcgctcagtacctggtgcccgccacctgc
aaggcagctgccgtccttgggatggacaaggtcgtggcggagcctgtcagccgcctgctg
gagagcacactcaggagcagccacctgcccagcagggtcggagccctgcacggcatcctc
tatgtgctggagtgcgacctgctggacgatactgccaagcagctcatcccagtcatcagt
gactatctcctctccaacctgaaagggatcgcccactgcgtgaacattcacagccagcag
cacgtactggtcatgtgtgccactgcgttttacctgattgagaactatcctctggacgta
gggccagaattttcagcatcaataatacagatgtgtggggtgatgctgtccggaagtgag
gagtccaccccctctatcatttaccactgtgccctcagaggcctggagcgcctcctgctc
tctgagcagctctcccgcctggatgcagaatccctggtcaagctgagtgtggacagagtg
aacgtgcacagcccgcaccgagccatggcggctctgggcttgatgctcacctgcatgtac
acaggaaaggagaaagtcagtccgggtagaacttcagaccctaatcctgcagccccagac
agcgagtcggtgattgttgctatggagcgggtgtctgttctttttgataggatcaggaaa
ggctttccttgtgaagccagagtggtggcgaggatcctgccccagtttctagacgacttc
ttcccaccccaggacatcatgaacaaagtcatcggagagtttctgtccaaccagcagcca
tacccccagttcatggccaccgtggtgtataaggtgtttcagactctgcacagcaccggg
cagtcatccatggtccgggactgggtcatgctgtccctctccaacttcacacagaggacc
ccagtcgccatggccacatggagcctctcctgcttcttcgtcagcgcgtccaccagccca
tgggttgcggcgatcctcccacatgtcatcagcaggatgggaaagctggagcaggtggac
gtcaaccttttctgcctggttgccacagacttttacagacaccagatagaggaggagctc
gaccgcagggccttccagtctgtgtttgaggtggttgcagctccaggaagcccatatcac
cggctgctgacttgtttacgaaatgtccacaaggtcaccacctgctga
DBGET
integrated database retrieval system
