Macaca fascicularis (crab-eating macaque): 102131381
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Entry
102131381 CDS
T02918
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
mcf
Macaca fascicularis (crab-eating macaque)
Brite
KEGG Orthology (KO) [BR:
mcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcf03021
]
102131381 (SCAF8)
03041 Spliceosome [BR:
mcf03041
]
102131381 (SCAF8)
Transcription machinery [BR:
mcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102131381 (SCAF8)
Spliceosome [BR:
mcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102131381 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
102131381
NCBI-ProteinID:
XP_015304484
Ensembl:
ENSMFAG00000032738
LinkDB
All DBs
Position
4:complement(108591117..108818498)
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AA seq
1292 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEP
KKEIPTSQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVA
MLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPP
PVVPPPAIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNA
PTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPN
VSSNSEILGVRPSNVSSSSGIIGAQPPNILNNSGILGIQPPSVSSGSGLLGVLPPNIPNN
SGLVGVQPPNVPNTSGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRF
PLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSIDNVANPEK
RIPLGNDNIQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDH
FGRPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEE
RGRFRSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLG
RDRIQNTWVPPPHARVFDYFEGATSQRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEK
LTSSNEINKEKSDTVADIESEPVVESTETEGT
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaagaccttcaatagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatactgtattccctgaatgactataaacca
cccatttcgaaagcaaaaatgacccaaattactaaggccgccatcaaagctattaagttc
tataaacatgtggtacagagtgttgagaagtttattcagaaatgtaaaccagaatacaaa
gtacctggactttatgttattgactccattgtgcgacaatccagacatcagtttggtcaa
gaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtactaaacttatggcagaag
aataatgtatttaagagtgagattattcagcctcttttggatatggcagctgggattcca
cctcctgttgtcacacctgttttggccagcactaccactgctatgagcaatactccagga
actcctgtgacacctgttactccggccaatgtggtccaaggcttacctgatccgtgggta
tctcagataacaaatacagatacactcgcggctgtggctcagatcttgcaaagtcctcaa
ggccagcagcttcaacaattaatacaaaccttacagatacaacaacagaagccccagcct
tccattctgcaggccctagatgctggtcttgttgttcagttgcaagctcttacggcacaa
cttacagctgcagctgcggctgccaacactcttactcccttagaacagggagtctccttt
aacaagaagttgatggataggtttgattttggggaagattctgagcatagtgaagaaccc
aaaaaagaaattccaacttcacaactttctcacgtttcagaatctgtgaacaattccatt
tttcatcagatagcagaacaactacaacagcaaaacctagaacatctcagacagcagctc
ttggagcagcaacagcctcaaaaggccactcctcaggatagtcaggaaggaacatttggg
tcagagcattcagcgtcaccatcacaagggagtagtcagcagcattttcttgaacctgaa
gtcaatttggatgattccatagatattcagcagcaggatatggatatagatgaagggcaa
gatggagtggaagaggaggtctttgaacaagaagctaagaaagtagcagttcgctcaaga
tcaagaacacattcacgatctcgttcaagatcaccaagaaaacgaaggtctaggtcacgg
tctggctctagaaagcgtaaacacagaaagcgatcacgctcccgctcaagagaaagaaag
aggaaatcatcacggtcgtattcaagtgaaaggagagccagagaaagggaaaaagaaaga
cagaaaaagggattacctccaattagatctaaaacactgagtgtatgtagtactactctc
tgggttgggcaagtggacaagaaggcaacacagcaagacttaaccaacctgtttgaagag
tttggacaaattgaatccattaatatgattcctcccaggggctgtgcttatgtctgcatg
gttcatcgacaagatgcatttcgagctcttcagaaactcagttctggatcgtataaaatt
gggtccaaggtcattaagatcgcttgggctttaaacaaaggtgtaaaaacagaatacaaa
caattctgggatgtggatcttggagttacatatataccatgggaaaaagttaaagtggat
gacttggaaggttttgcagaaggaggcatgattgatcaggagactgtaaatactgagtgg
gaaactgtgaaaagctcagaacctgttaaagagacggtccagacaactcagagcccaact
ccagttgaaaaggagacagtggtcacaacccaggcagaggttttccctcctcctgttgct
atgttgcagattccagtggcgccagccgtgcctacagttagtttagtcccaccagcattt
cctgtgtcgatgccggttcctcctcctggatttagtccgattcctccacctcctttttta
cgagcaagttttaacccttcacaaccaccacctggtttcatgccgcctccagttccccca
cctgttgtgccaccccctgcaattccaccagtagtaccaacatctttagtgcagccgtca
ttatccatgaccccggaaactgtgaaagatgttgggtttggtagccttgttataccgggt
ggctctgttgccagcaatcttgctacttccgctctgccagctggaaatgtttttaatgct
ccaactaaacaggcagagcctgaagaaaaagtacctcatctgatagaccaccagatttct
tctggtgaaaacaccagatcagtgattccaaatgatatttcaagtaatgctgcaatttta
ggaggacagccaccaaatgtgacaagcaattctggaattctgggagtccaaagaccaaat
gtatcaagtaattctgaaattcttggggtccggccatctaatgtttccagtagttctggg
attattggagcccaaccaccaaatattctaaataactctggaatattgggaatacagcca
cccagtgtgtcaagtggttctggacttttgggagtgctacccccaaatatacctaacaat
tctggacttgtaggagtacagccaccaaatgttccaaatacttctggacttctgggaaca
cagccaccagctggacctcaaaacttaccccctttaagtatccctaatcaaaggatgccc
acaatgccaatgttagacattcgtccaggactaataccacaggcacctgggccaagattc
cctttaatacagcctggaattccaccccagcggggaatcccacccccatcggtacttgat
tcagctcttcatccaccaccccgtggaccttttcctccaggagatatttttagtcagcca
gaaagaccttttttagctcctggaagacaaagcatagacaatgttgctaacccagaaaaa
aggataccacttgggaatgataacattcaacaggaaggagatagagattaccggtttcct
cctatagaaaccagggaaagcattagtagacctccccctgtggatgttagagatgtggtt
gggcggcctatagatccaagagaaggtcctggacggcctccactagatggtagggatcat
tttggaagacctcctgtagatataagagagaatcttgtgaggccaggtatagatcatctt
ggtcgaagagaccactttggctttaatcctgagaagccctgggggcatagaggagatttt
gatgagagagagcatcgggttctaccggtctatggtggtccaaaaggcttacatgaagaa
agaggtagatttcggtctggaaactatcgatttgatcctagaagtggtccttggaaccga
ggatttggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaa
agggacagggatgacagagattttgatttctgcagagaaatgaacggaaatcgtcttgga
cgagacagaattcaaaacacttgggttccccctcctcatgctcgggtttttgattatttt
gaaggggccacttctcaacgaaaaggtgataatgtgcctcaggttaatggtgaaaataca
gagagacatgctcagccaccacctataccagtacagaatgatcctgaactttatgaaaaa
ctgacatcttcaaatgaaataaacaaggagaagagtgacacagttgctgatatagaaagt
gaaccagtggtagaaagcacagaaactgaggggacataa
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