| Entry |
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| Symbol |
FDFT1
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| Name |
(RefSeq) squalene synthase isoform X2
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| KO |
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| Organism |
mcf Macaca fascicularis (crab-eating macaque)
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| Pathway |
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| Module |
| mcf_M00101 | Cholesterol biosynthesis, FPP => cholesterol |
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| Brite |
KEGG Orthology (KO) [BR:mcf00001]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102131949 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:mcf01006]
102131949 (FDFT1)
Enzymes [BR:mcf01000]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102131949 (FDFT1)
Prenyltransferases [BR:mcf01006]
Terpene biosynthesis
Squalene/phytoene synthase
102131949 (FDFT1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
8:complement(join(9077635..9077856,9081989..9082141,9083237..9083413,9087289..9087480,9091662..9091790,9103921..9104104,9104879..9104976,9110813..9110911))
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| AA seq |
417 aa
MEFVKCLGHPEEFYNLVRFRIGGKRKVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQA
LDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQ
VLEDFPTISLEFRNLAEKYQTVIADICQRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVG
IGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQEGREFWPQEVWSRYV
KKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATL
AACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTR
QIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLTTLSQVTEDYVQTGEH |
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| NT seq |
1254 nt +upstreamnt +downstreamnt
atggagttcgtgaagtgcctgggccaccccgaagagttctacaacctggtgcgcttccgg
atcgggggcaagcggaaggtgatgcccaagatggaccaggactcgctcagcagcagcctg
aaaacttgctacaagtatctcaatcagaccagtcgcagtttcgcagctgttatccaggcg
ctggatggggaaatgcgcaacgcagtgtgcatattttatctggttctccgagctctggac
acactggaagatgacatgaccatcagtgtggaaaagaaggtcccgctgttacacaacttt
cactctttcctttaccaaccagactggcggttcatggagagcaaggagaaggatcgccag
gtgctggaggacttcccaacgatctccctcgagtttagaaatctggctgagaaataccaa
acggtgattgccgacatttgccagagaatgggaattgggatggcagaatttttggataag
catgtgacctctgagcaggagtgggacaagtactgccactatgtcgctgggctggtagga
atcggcctttcccgcctcttctcggcttcagagttcgaagaccccttagttggtgaagat
acggaacgtgccaactctatgggcctgtttctgcagaaaacaaacatcattcgtgactat
ctggaagaccagcaagaaggaagagagttttggcctcaagaggtttggagcaggtatgtt
aagaagttaggggattttgctaagccagagaatattgacttggccgtgcagtgcctgaat
gaacttataaccaatgcactgcaccacatcccagatgtcatcacctacctttcaagactc
agaaaccagagtgtgtttaacttctgtgctattccacaggtgatggccattgccactttg
gctgcctgttacaataaccagcaggtgttcaaaggggcagtgaagattcggaaagggcaa
gcggtgaccctgatgatggatgccaccaatatgccagctgtcaaagccatcatatatcag
tatatggaagagatttatcatagaatccccgactcagacccatcttctagtaaaacaagg
cagatcatctccaccatccggacgcagaatcttcccaactgtcagctgatctcccgaagc
cactactcccccatctacctgtcgtttgtcatgctcttggctgccctgagctggcagtac
ctgaccacactctcccaggtcacagaagactatgttcagactggagaacactga |
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